2016-04-05 09:22:22  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /zpool/tingley/DT2/DT2_rPPC_rCCG_1226um_290um_20160211_160213_120712/DT2_rPPC_rCCG_1226um_290um_20160211_160213_120712.dat>
2016-04-05 09:22:22  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/zpool/tingley/DT2/DT2_rPPC_rCCG_1226um_290um_20160211_160213_120712/13/DT2_rPPC_rCCG_1226um_290um_20160211_160213_120712_sh13',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 500.0,
 'nbits': 16,
 'nchannels': 128,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '13.prb',
 'raw_data_files': ['/zpool/tingley/DT2/DT2_rPPC_rCCG_1226um_290um_20160211_160213_120712/DT2_rPPC_rCCG_1226um_290um_20160211_160213_120712.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': True,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2016-04-05 09:23:53  main:200                Threshold: DoubleThreshold(strong=array([ 284.96613603]), weak=array([ 126.65161601]))
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2016-04-05 09:24:24  progressbar:97          0% complete, 30s elapsed, 3h 12m 47s remaining. 1300 spikes found.
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2016-04-05 09:24:54  progressbar:97          0% complete, 1m 0s elapsed, 3h 8m 19s remaining. 2428 spikes found.
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2016-04-05 09:25:25  progressbar:97          1% complete, 1m 31s elapsed, 2h 23m 54s remaining. 4352 spikes found.
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2016-04-05 10:19:51  progressbar:97          53% complete, 55m 57s elapsed, 47m 47s remaining. 127453 spikes found.
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2016-04-05 10:20:21  progressbar:97          54% complete, 56m 27s elapsed, 47m 38s remaining. 128445 spikes found.
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2016-04-05 10:21:53  progressbar:97          55% complete, 57m 59s elapsed, 47m 20s remaining. 133148 spikes found.
2016-04-05 10:21:53  main:222                Processing chunk <Chunk (159629100/289949040), recording 0>...
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2016-04-05 10:22:23  progressbar:97          55% complete, 58m 29s elapsed, 47m 14s remaining. 134987 spikes found.
2016-04-05 10:22:23  main:222                Processing chunk <Chunk (160397400/289949040), recording 0>...
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2016-04-05 10:22:53  progressbar:97          55% complete, 58m 59s elapsed, 47m 13s remaining. 136403 spikes found.
2016-04-05 10:22:53  main:222                Processing chunk <Chunk (161027800/289949040), recording 0>...
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2016-04-05 10:23:24  progressbar:97          55% complete, 59m 30s elapsed, 47m 9s remaining. 138526 spikes found.
2016-04-05 10:23:24  main:222                Processing chunk <Chunk (161756700/289949040), recording 0>...
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2016-04-05 10:23:54  progressbar:97          56% complete, 1h 0m 0s elapsed, 46m 59s remaining. 139776 spikes found.
2016-04-05 10:23:54  main:222                Processing chunk <Chunk (162603800/289949040), recording 0>...
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2016-04-05 10:25:26  progressbar:97          56% complete, 1h 1m 32s elapsed, 46m 32s remaining. 143873 spikes found.
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2016-04-05 10:26:26  progressbar:97          57% complete, 1h 2m 32s elapsed, 46m 30s remaining. 145289 spikes found.
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2016-04-05 10:26:58  progressbar:97          57% complete, 1h 3m 4s elapsed, 46m 21s remaining. 146114 spikes found.
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2016-04-05 10:28:29  progressbar:97          58% complete, 1h 4m 35s elapsed, 45m 46s remaining. 147896 spikes found.
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2016-04-05 10:29:00  progressbar:97          58% complete, 1h 5m 6s elapsed, 45m 35s remaining. 148347 spikes found.
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2016-04-05 10:29:30  progressbar:97          59% complete, 1h 5m 36s elapsed, 45m 26s remaining. 148902 spikes found.
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2016-04-05 10:30:01  progressbar:97          59% complete, 1h 6m 7s elapsed, 45m 14s remaining. 149393 spikes found.
2016-04-05 10:30:01  main:222                Processing chunk <Chunk (172158300/289949040), recording 0>...
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2016-04-05 10:30:32  progressbar:97          59% complete, 1h 6m 38s elapsed, 45m 0s remaining. 149713 spikes found.
2016-04-05 10:30:32  main:222                Processing chunk <Chunk (173064500/289949040), recording 0>...
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2016-04-05 10:31:03  progressbar:97          59% complete, 1h 7m 9s elapsed, 44m 49s remaining. 150522 spikes found.
2016-04-05 10:31:03  main:222                Processing chunk <Chunk (173891900/289949040), recording 0>...
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2016-04-05 10:31:34  progressbar:97          60% complete, 1h 7m 40s elapsed, 44m 35s remaining. 151167 spikes found.
2016-04-05 10:31:34  main:222                Processing chunk <Chunk (174778400/289949040), recording 0>...
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2016-04-05 10:32:04  progressbar:97          60% complete, 1h 8m 10s elapsed, 44m 26s remaining. 151883 spikes found.
2016-04-05 10:32:04  main:222                Processing chunk <Chunk (175527000/289949040), recording 0>...
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2016-04-05 10:32:34  progressbar:97          60% complete, 1h 8m 40s elapsed, 44m 13s remaining. 152407 spikes found.
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2016-04-05 10:33:04  progressbar:97          61% complete, 1h 9m 10s elapsed, 43m 59s remaining. 152864 spikes found.
2016-04-05 10:33:04  main:222                Processing chunk <Chunk (177240900/289949040), recording 0>...
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2016-04-05 10:33:34  progressbar:97          61% complete, 1h 9m 40s elapsed, 43m 49s remaining. 154105 spikes found.
2016-04-05 10:33:34  main:222                Processing chunk <Chunk (178009200/289949040), recording 0>...
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2016-04-05 10:34:04  progressbar:97          61% complete, 1h 10m 10s elapsed, 43m 36s remaining. 154690 spikes found.
2016-04-05 10:34:04  main:222                Processing chunk <Chunk (178816900/289949040), recording 0>...
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2016-04-05 10:34:35  progressbar:97          61% complete, 1h 10m 41s elapsed, 43m 24s remaining. 155275 spikes found.
2016-04-05 10:34:35  main:222                Processing chunk <Chunk (179624600/289949040), recording 0>...
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2016-04-05 10:35:05  progressbar:97          62% complete, 1h 11m 11s elapsed, 43m 14s remaining. 156084 spikes found.
2016-04-05 10:35:05  main:222                Processing chunk <Chunk (180392900/289949040), recording 0>...
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2016-04-05 10:36:05  main:222                Processing chunk <Chunk (181988600/289949040), recording 0>...
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2016-04-05 10:36:36  progressbar:97          63% complete, 1h 12m 42s elapsed, 42m 36s remaining. 158558 spikes found.
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2016-04-05 10:37:06  progressbar:97          63% complete, 1h 13m 12s elapsed, 42m 22s remaining. 159209 spikes found.
2016-04-05 10:37:06  main:222                Processing chunk <Chunk (183643400/289949040), recording 0>...
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2016-04-05 10:37:37  progressbar:97          63% complete, 1h 13m 43s elapsed, 42m 9s remaining. 159846 spikes found.
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2016-04-05 10:39:08  progressbar:97          64% complete, 1h 15m 14s elapsed, 41m 31s remaining. 161803 spikes found.
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2016-04-05 10:39:38  progressbar:97          64% complete, 1h 15m 44s elapsed, 41m 15s remaining. 162486 spikes found.
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2016-04-05 10:40:09  progressbar:97          65% complete, 1h 16m 15s elapsed, 41m 3s remaining. 163464 spikes found.
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2016-04-05 10:40:39  progressbar:97          65% complete, 1h 16m 45s elapsed, 40m 51s remaining. 164623 spikes found.
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2016-04-05 10:41:10  progressbar:97          65% complete, 1h 17m 16s elapsed, 40m 42s remaining. 165726 spikes found.
2016-04-05 10:41:10  main:222                Processing chunk <Chunk (189908000/289949040), recording 0>...
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2016-04-05 10:41:40  progressbar:97          65% complete, 1h 17m 46s elapsed, 40m 28s remaining. 166580 spikes found.
2016-04-05 10:41:40  main:222                Processing chunk <Chunk (190715700/289949040), recording 0>...
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2016-04-05 10:42:11  progressbar:97          66% complete, 1h 18m 17s elapsed, 40m 13s remaining. 167479 spikes found.
2016-04-05 10:42:11  main:222                Processing chunk <Chunk (191543100/289949040), recording 0>...
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2016-04-05 10:42:42  progressbar:97          66% complete, 1h 18m 48s elapsed, 39m 56s remaining. 168534 spikes found.
2016-04-05 10:42:42  main:222                Processing chunk <Chunk (192409900/289949040), recording 0>...
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2016-04-05 10:43:12  progressbar:97          66% complete, 1h 19m 18s elapsed, 39m 45s remaining. 169392 spikes found.
2016-04-05 10:43:12  main:222                Processing chunk <Chunk (193138800/289949040), recording 0>...
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2016-04-05 10:43:43  progressbar:97          66% complete, 1h 19m 49s elapsed, 39m 29s remaining. 171181 spikes found.
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2016-04-05 10:44:14  progressbar:97          67% complete, 1h 20m 20s elapsed, 39m 16s remaining. 172544 spikes found.
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2016-04-05 10:44:45  progressbar:97          67% complete, 1h 20m 51s elapsed, 39m 3s remaining. 173812 spikes found.
2016-04-05 10:44:45  main:222                Processing chunk <Chunk (195522500/289949040), recording 0>...
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2016-04-05 10:45:16  progressbar:97          67% complete, 1h 21m 22s elapsed, 38m 47s remaining. 174983 spikes found.
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2016-04-05 10:45:46  progressbar:97          67% complete, 1h 21m 52s elapsed, 38m 34s remaining. 176115 spikes found.
2016-04-05 10:45:46  main:222                Processing chunk <Chunk (197098500/289949040), recording 0>...
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2016-04-05 10:46:16  progressbar:97          68% complete, 1h 22m 23s elapsed, 38m 18s remaining. 177518 spikes found.
2016-04-05 10:46:16  main:222                Processing chunk <Chunk (197906200/289949040), recording 0>...
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2016-04-05 10:46:47  progressbar:97          68% complete, 1h 22m 53s elapsed, 38m 5s remaining. 179270 spikes found.
2016-04-05 10:46:47  main:222                Processing chunk <Chunk (198654800/289949040), recording 0>...
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2016-04-05 10:47:18  progressbar:97          68% complete, 1h 23m 24s elapsed, 37m 51s remaining. 180948 spikes found.
2016-04-05 10:47:18  main:222                Processing chunk <Chunk (199423100/289949040), recording 0>...
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2016-04-05 10:47:48  progressbar:97          69% complete, 1h 23m 54s elapsed, 37m 38s remaining. 182324 spikes found.
2016-04-05 10:47:48  main:222                Processing chunk <Chunk (200152000/289949040), recording 0>...
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2016-04-05 10:48:18  progressbar:97          69% complete, 1h 24m 24s elapsed, 37m 26s remaining. 183367 spikes found.
2016-04-05 10:48:18  main:222                Processing chunk <Chunk (200861200/289949040), recording 0>...
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2016-04-05 10:48:48  progressbar:97          69% complete, 1h 24m 54s elapsed, 37m 12s remaining. 184589 spikes found.
2016-04-05 10:48:48  main:222                Processing chunk <Chunk (201609800/289949040), recording 0>...
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2016-04-05 11:07:28  progressbar:97          83% complete, 1h 43m 34s elapsed, 20m 9s remaining. 235256 spikes found.
2016-04-05 11:07:28  main:222                Processing chunk <Chunk (242704000/289949040), recording 0>...
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2016-04-05 11:07:58  progressbar:97          84% complete, 1h 44m 4s elapsed, 19m 35s remaining. 235892 spikes found.
2016-04-05 11:07:58  main:222                Processing chunk <Chunk (244023900/289949040), recording 0>...
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2016-04-05 11:08:28  progressbar:97          84% complete, 1h 44m 34s elapsed, 19m 10s remaining. 236361 spikes found.
2016-04-05 11:08:28  main:222                Processing chunk <Chunk (245008900/289949040), recording 0>...
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2016-04-05 11:28:33  progressbar:97          100% complete, 2h 4m 39s elapsed, 0s remaining. 254483 spikes found.