2016-03-23 05:02:59  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /zpool/tingley/DT2/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304.dat>
2016-03-23 05:02:59  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/zpool/tingley/DT2/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304/13/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304_sh13',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 500.0,
 'nbits': 16,
 'nchannels': 128,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '13.prb',
 'raw_data_files': ['/zpool/tingley/DT2/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': True,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2016-03-23 05:03:18  main:200                Threshold: DoubleThreshold(strong=array([ 259.39939621]), weak=array([ 115.28862054]))
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2016-03-23 05:03:49  progressbar:97          0% complete, 30s elapsed, 1h 1m 52s remaining. 4174 spikes found.
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2016-03-23 05:04:20  progressbar:97          1% complete, 1m 1s elapsed, 56m 9s remaining. 6941 spikes found.
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2016-03-23 05:23:29  progressbar:97          33% complete, 20m 10s elapsed, 39m 26s remaining. 88336 spikes found.
2016-03-23 05:23:29  main:222                Processing chunk <Chunk (53170300/157119840), recording 0>...
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2016-03-23 05:23:59  progressbar:97          34% complete, 20m 40s elapsed, 39m 26s remaining. 89390 spikes found.
2016-03-23 05:23:59  main:222                Processing chunk <Chunk (54037100/157119840), recording 0>...
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2016-03-23 05:24:30  progressbar:97          34% complete, 21m 11s elapsed, 39m 35s remaining. 90148 spikes found.
2016-03-23 05:24:30  main:222                Processing chunk <Chunk (54785700/157119840), recording 0>...
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2016-03-23 05:25:00  progressbar:97          35% complete, 21m 41s elapsed, 39m 46s remaining. 90880 spikes found.
2016-03-23 05:25:00  main:222                Processing chunk <Chunk (55455500/157119840), recording 0>...
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2016-03-23 05:25:31  progressbar:97          35% complete, 22m 12s elapsed, 39m 46s remaining. 91823 spikes found.
2016-03-23 05:25:31  main:222                Processing chunk <Chunk (56282900/157119840), recording 0>...
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2016-03-23 05:26:01  progressbar:97          36% complete, 22m 42s elapsed, 39m 44s remaining. 93491 spikes found.
2016-03-23 05:26:01  main:222                Processing chunk <Chunk (57130000/157119840), recording 0>...
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2016-03-23 05:27:02  progressbar:97          37% complete, 23m 43s elapsed, 39m 40s remaining. 96533 spikes found.
2016-03-23 05:27:02  main:222                Processing chunk <Chunk (58804500/157119840), recording 0>...
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2016-03-23 05:27:37  progressbar:97          37% complete, 24m 18s elapsed, 39m 50s remaining. 97381 spikes found.
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2016-03-23 05:28:07  progressbar:97          38% complete, 24m 48s elapsed, 39m 29s remaining. 98760 spikes found.
2016-03-23 05:28:07  main:222                Processing chunk <Chunk (60636600/157119840), recording 0>...
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2016-03-23 05:28:38  progressbar:97          39% complete, 25m 19s elapsed, 39m 7s remaining. 100064 spikes found.
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2016-03-23 05:31:09  progressbar:97          42% complete, 27m 50s elapsed, 36m 59s remaining. 108678 spikes found.
2016-03-23 05:31:09  main:222                Processing chunk <Chunk (67472500/157119840), recording 0>...
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2016-03-23 05:31:39  progressbar:97          43% complete, 28m 20s elapsed, 36m 43s remaining. 110836 spikes found.
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2016-03-23 05:32:10  progressbar:97          44% complete, 28m 51s elapsed, 36m 18s remaining. 112511 spikes found.
2016-03-23 05:32:10  main:222                Processing chunk <Chunk (69560700/157119840), recording 0>...
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2016-03-23 05:32:40  progressbar:97          44% complete, 29m 21s elapsed, 36m 16s remaining. 113672 spikes found.
2016-03-23 05:32:40  main:222                Processing chunk <Chunk (70269900/157119840), recording 0>...
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2016-03-23 05:36:11  progressbar:97          49% complete, 32m 53s elapsed, 33m 54s remaining. 126690 spikes found.
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2016-03-23 05:38:16  progressbar:97          51% complete, 34m 57s elapsed, 33m 27s remaining. 131190 spikes found.
2016-03-23 05:38:16  main:222                Processing chunk <Chunk (80277500/157119840), recording 0>...
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2016-03-23 05:38:46  progressbar:97          51% complete, 35m 27s elapsed, 33m 17s remaining. 132233 spikes found.
2016-03-23 05:38:46  main:222                Processing chunk <Chunk (81045800/157119840), recording 0>...
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2016-03-23 05:39:17  progressbar:97          51% complete, 35m 58s elapsed, 33m 23s remaining. 132802 spikes found.
2016-03-23 05:39:17  main:222                Processing chunk <Chunk (81479200/157119840), recording 0>...
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2016-03-23 05:39:48  progressbar:97          52% complete, 36m 29s elapsed, 33m 7s remaining. 133976 spikes found.
2016-03-23 05:39:48  main:222                Processing chunk <Chunk (82346000/157119840), recording 0>...
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2016-03-23 05:40:18  progressbar:97          53% complete, 36m 59s elapsed, 32m 39s remaining. 135240 spikes found.
2016-03-23 05:40:18  main:222                Processing chunk <Chunk (83449200/157119840), recording 0>...
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2016-03-23 05:41:52  progressbar:97          54% complete, 38m 33s elapsed, 32m 1s remaining. 138315 spikes found.
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2016-03-23 05:42:26  progressbar:97          55% complete, 39m 7s elapsed, 31m 47s remaining. 139396 spikes found.
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2016-03-23 05:42:56  progressbar:97          55% complete, 39m 37s elapsed, 31m 38s remaining. 140775 spikes found.
2016-03-23 05:42:56  main:222                Processing chunk <Chunk (87369500/157119840), recording 0>...
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2016-03-23 05:47:35  progressbar:97          61% complete, 44m 16s elapsed, 27m 19s remaining. 156647 spikes found.
2016-03-23 05:47:35  main:222                Processing chunk <Chunk (97160400/157119840), recording 0>...
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2016-03-23 05:48:05  progressbar:97          62% complete, 44m 46s elapsed, 26m 49s remaining. 158212 spikes found.
2016-03-23 05:48:05  main:222                Processing chunk <Chunk (98263600/157119840), recording 0>...
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2016-03-23 05:48:36  progressbar:97          63% complete, 45m 17s elapsed, 26m 17s remaining. 160239 spikes found.
2016-03-23 05:48:36  main:222                Processing chunk <Chunk (99406200/157119840), recording 0>...
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2016-03-23 05:49:06  progressbar:97          63% complete, 45m 47s elapsed, 25m 48s remaining. 162003 spikes found.
2016-03-23 05:49:06  main:222                Processing chunk <Chunk (100489700/157119840), recording 0>...
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2016-03-23 05:49:36  progressbar:97          64% complete, 46m 17s elapsed, 25m 38s remaining. 163254 spikes found.
2016-03-23 05:49:36  main:222                Processing chunk <Chunk (101120100/157119840), recording 0>...
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2016-03-23 05:51:08  progressbar:97          65% complete, 47m 49s elapsed, 24m 57s remaining. 166583 spikes found.
2016-03-23 05:51:08  main:222                Processing chunk <Chunk (103228000/157119840), recording 0>...
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2016-03-23 05:51:39  progressbar:97          66% complete, 48m 20s elapsed, 24m 38s remaining. 167758 spikes found.
2016-03-23 05:51:39  main:222                Processing chunk <Chunk (104075100/157119840), recording 0>...
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2016-03-23 05:52:10  progressbar:97          66% complete, 48m 51s elapsed, 24m 20s remaining. 169169 spikes found.
2016-03-23 05:52:10  main:222                Processing chunk <Chunk (104863100/157119840), recording 0>...
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2016-03-23 05:52:40  progressbar:97          67% complete, 49m 21s elapsed, 24m 2s remaining. 170098 spikes found.
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2016-03-23 05:58:46  main:222                Processing chunk <Chunk (116860400/157119840), recording 0>...
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2016-03-23 06:00:18  progressbar:97          75% complete, 56m 59s elapsed, 18m 8s remaining. 193461 spikes found.
2016-03-23 06:00:18  main:222                Processing chunk <Chunk (119185000/157119840), recording 0>...
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2016-03-23 06:00:48  progressbar:97          76% complete, 57m 29s elapsed, 17m 50s remaining. 194494 spikes found.
2016-03-23 06:00:48  main:222                Processing chunk <Chunk (119913900/157119840), recording 0>...
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2016-03-23 06:01:18  progressbar:97          76% complete, 57m 59s elapsed, 17m 37s remaining. 195274 spikes found.
2016-03-23 06:01:18  main:222                Processing chunk <Chunk (120504900/157119840), recording 0>...
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2016-03-23 06:01:49  progressbar:97          77% complete, 58m 30s elapsed, 17m 19s remaining. 196287 spikes found.
2016-03-23 06:01:49  main:222                Processing chunk <Chunk (121233800/157119840), recording 0>...
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2016-03-23 06:02:19  progressbar:97          77% complete, 59m 0s elapsed, 16m 51s remaining. 197603 spikes found.
2016-03-23 06:02:19  main:222                Processing chunk <Chunk (122199100/157119840), recording 0>...
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2016-03-23 06:07:57  main:222                Processing chunk <Chunk (133290200/157119840), recording 0>...
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2016-03-23 06:08:27  progressbar:97          85% complete, 1h 5m 8s elapsed, 11m 8s remaining. 215848 spikes found.
2016-03-23 06:08:27  main:222                Processing chunk <Chunk (134176700/157119840), recording 0>...
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2016-03-23 06:08:57  progressbar:97          85% complete, 1h 5m 38s elapsed, 11m 1s remaining. 216741 spikes found.
2016-03-23 06:08:57  main:222                Processing chunk <Chunk (134511600/157119840), recording 0>...
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2016-03-23 06:09:27  progressbar:97          86% complete, 1h 6m 8s elapsed, 10m 38s remaining. 219432 spikes found.
2016-03-23 06:09:27  main:222                Processing chunk <Chunk (135339000/157119840), recording 0>...
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2016-03-23 06:10:10  progressbar:97          86% complete, 1h 6m 51s elapsed, 10m 19s remaining. 220419 spikes found.
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2016-03-23 06:19:21  progressbar:97          98% complete, 1h 16m 2s elapsed, 1m 16s remaining. 242784 spikes found.
2016-03-23 06:19:21  main:222                Processing chunk <Chunk (154526800/157119840), recording 0>...
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2016-03-23 06:19:51  progressbar:97          98% complete, 1h 16m 32s elapsed, 51s remaining. 243943 spikes found.
2016-03-23 06:19:51  main:222                Processing chunk <Chunk (155393600/157119840), recording 0>...
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2016-03-23 06:20:23  progressbar:97          99% complete, 1h 17m 4s elapsed, 31s remaining. 248151 spikes found.
2016-03-23 06:20:23  main:222                Processing chunk <Chunk (156043700/157119840), recording 0>...
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2016-03-23 06:20:53  progressbar:97          99% complete, 1h 17m 34s elapsed, 20s remaining. 261745 spikes found.
2016-03-23 06:20:53  main:222                Processing chunk <Chunk (156418000/157119840), recording 0>...
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2016-03-23 06:21:23  progressbar:97          99% complete, 1h 18m 4s elapsed, 10s remaining. 271303 spikes found.
2016-03-23 06:21:23  main:222                Processing chunk <Chunk (156752900/157119840), recording 0>...
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2016-03-23 06:21:55  progressbar:97          99% complete, 1h 18m 36s elapsed, 2s remaining. 286442 spikes found.
2016-03-23 06:21:55  main:222                Processing chunk <Chunk (157048400/157119840), recording 0>...
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2016-03-23 06:22:03  progressbar:97          100% complete, 1h 18m 44s elapsed, 0s remaining. 290346 spikes found.