2016-03-23 10:03:31  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /zpool/tingley/DT2/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304.dat>
2016-03-23 10:03:31  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/zpool/tingley/DT2/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304/2/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304_sh2',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 500.0,
 'nbits': 16,
 'nchannels': 128,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '2.prb',
 'raw_data_files': ['/zpool/tingley/DT2/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304/DT2_rPPC_rCCG_3324um_794um_20160216_160216_163304.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': True,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2016-03-23 10:05:45  main:200                Threshold: DoubleThreshold(strong=array([ 259.39939621]), weak=array([ 115.28862054]))
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2016-03-23 10:06:17  progressbar:97          0% complete, 30s elapsed, 1h 38m 41s remaining. 598 spikes found.
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2016-03-23 10:06:47  progressbar:97          0% complete, 1m 1s elapsed, 1h 50m 11s remaining. 1516 spikes found.
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2016-03-23 10:07:18  progressbar:97          1% complete, 1m 32s elapsed, 1h 44m 1s remaining. 2074 spikes found.
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2016-03-23 10:07:48  progressbar:97          2% complete, 2m 2s elapsed, 1h 33m 32s remaining. 2509 spikes found.
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2016-03-23 10:09:49  progressbar:97          4% complete, 4m 3s elapsed, 1h 24m 58s remaining. 3896 spikes found.
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2016-03-23 10:11:50  progressbar:97          6% complete, 6m 4s elapsed, 1h 21m 18s remaining. 4893 spikes found.
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2016-03-23 10:12:21  progressbar:97          7% complete, 6m 34s elapsed, 1h 19m 37s remaining. 5134 spikes found.
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2016-03-23 10:23:01  progressbar:97          19% complete, 17m 15s elapsed, 1h 10m 58s remaining. 15249 spikes found.
2016-03-23 10:23:01  main:222                Processing chunk <Chunk (30732000/157119840), recording 0>...
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2016-03-23 10:23:32  progressbar:97          19% complete, 17m 45s elapsed, 1h 11m 17s remaining. 16477 spikes found.
2016-03-23 10:23:32  main:222                Processing chunk <Chunk (31342700/157119840), recording 0>...
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2016-03-23 10:24:02  progressbar:97          20% complete, 18m 16s elapsed, 1h 11m 30s remaining. 17313 spikes found.
2016-03-23 10:24:02  main:222                Processing chunk <Chunk (31973100/157119840), recording 0>...
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2016-03-23 10:24:32  progressbar:97          20% complete, 18m 46s elapsed, 1h 11m 54s remaining. 18054 spikes found.
2016-03-23 10:24:32  main:222                Processing chunk <Chunk (32524700/157119840), recording 0>...
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2016-03-23 10:25:03  progressbar:97          21% complete, 19m 17s elapsed, 1h 12m 3s remaining. 18718 spikes found.
2016-03-23 10:25:03  main:222                Processing chunk <Chunk (33174800/157119840), recording 0>...
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2016-03-23 10:25:36  progressbar:97          21% complete, 19m 50s elapsed, 1h 12m 47s remaining. 19601 spikes found.
2016-03-23 10:25:36  main:222                Processing chunk <Chunk (33647600/157119840), recording 0>...
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2016-03-23 10:26:08  progressbar:97          21% complete, 20m 22s elapsed, 1h 13m 28s remaining. 21014 spikes found.
2016-03-23 10:26:08  main:222                Processing chunk <Chunk (34100700/157119840), recording 0>...
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2016-03-23 10:26:38  progressbar:97          22% complete, 20m 52s elapsed, 1h 13m 43s remaining. 21770 spikes found.
2016-03-23 10:26:38  main:222                Processing chunk <Chunk (34672000/157119840), recording 0>...
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2016-03-23 10:27:08  progressbar:97          22% complete, 21m 22s elapsed, 1h 13m 46s remaining. 23106 spikes found.
2016-03-23 10:27:08  main:222                Processing chunk <Chunk (35302400/157119840), recording 0>...
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2016-03-23 10:27:39  progressbar:97          22% complete, 21m 53s elapsed, 1h 13m 34s remaining. 24209 spikes found.
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2016-03-23 10:28:11  progressbar:97          23% complete, 22m 25s elapsed, 1h 13m 43s remaining. 25020 spikes found.
2016-03-23 10:28:11  main:222                Processing chunk <Chunk (36642000/157119840), recording 0>...
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2016-03-23 10:28:42  progressbar:97          23% complete, 22m 55s elapsed, 1h 13m 35s remaining. 26115 spikes found.
2016-03-23 10:28:42  main:222                Processing chunk <Chunk (37331500/157119840), recording 0>...
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2016-03-23 10:29:12  progressbar:97          24% complete, 23m 26s elapsed, 1h 13m 9s remaining. 27538 spikes found.
2016-03-23 10:29:12  main:222                Processing chunk <Chunk (38119500/157119840), recording 0>...
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2016-03-23 10:29:43  progressbar:97          24% complete, 23m 57s elapsed, 1h 13m 23s remaining. 28566 spikes found.
2016-03-23 10:29:43  main:222                Processing chunk <Chunk (38671100/157119840), recording 0>...
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2016-03-23 10:30:14  progressbar:97          24% complete, 24m 28s elapsed, 1h 13m 42s remaining. 30165 spikes found.
2016-03-23 10:30:14  main:222                Processing chunk <Chunk (39163600/157119840), recording 0>...
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2016-03-23 10:31:45  progressbar:97          26% complete, 25m 59s elapsed, 1h 12m 40s remaining. 33016 spikes found.
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2016-03-23 10:32:16  progressbar:97          26% complete, 26m 30s elapsed, 1h 12m 21s remaining. 33401 spikes found.
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2016-03-23 10:32:46  progressbar:97          27% complete, 27m 0s elapsed, 1h 11m 42s remaining. 33904 spikes found.
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2016-03-23 10:33:17  progressbar:97          27% complete, 27m 30s elapsed, 1h 11m 12s remaining. 34231 spikes found.
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2016-03-23 10:33:47  progressbar:97          28% complete, 28m 1s elapsed, 1h 11m 2s remaining. 34463 spikes found.
2016-03-23 10:33:47  main:222                Processing chunk <Chunk (44443200/157119840), recording 0>...
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2016-03-23 10:34:17  progressbar:97          28% complete, 28m 31s elapsed, 1h 10m 44s remaining. 34728 spikes found.
2016-03-23 10:34:17  main:222                Processing chunk <Chunk (45152400/157119840), recording 0>...
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2016-03-23 10:34:48  progressbar:97          29% complete, 29m 1s elapsed, 1h 10m 33s remaining. 36056 spikes found.
2016-03-23 10:34:48  main:222                Processing chunk <Chunk (45802500/157119840), recording 0>...
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2016-03-23 10:35:22  progressbar:97          29% complete, 29m 36s elapsed, 1h 10m 28s remaining. 36305 spikes found.
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2016-03-23 10:35:52  progressbar:97          30% complete, 30m 6s elapsed, 1h 10m 12s remaining. 36547 spikes found.
2016-03-23 10:35:52  main:222                Processing chunk <Chunk (47161800/157119840), recording 0>...
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2016-03-23 10:36:22  progressbar:97          30% complete, 30m 36s elapsed, 1h 9m 46s remaining. 36831 spikes found.
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2016-03-23 10:38:55  progressbar:97          32% complete, 33m 9s elapsed, 1h 7m 53s remaining. 39148 spikes found.
2016-03-23 10:38:55  main:222                Processing chunk <Chunk (51554900/157119840), recording 0>...
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2016-03-23 10:39:25  progressbar:97          33% complete, 33m 39s elapsed, 1h 7m 31s remaining. 39510 spikes found.
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2016-03-23 10:43:30  progressbar:97          37% complete, 37m 44s elapsed, 1h 3m 38s remaining. 42217 spikes found.
2016-03-23 10:43:30  main:222                Processing chunk <Chunk (58489300/157119840), recording 0>...
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2016-03-23 10:44:01  progressbar:97          37% complete, 38m 15s elapsed, 1h 3m 16s remaining. 42479 spikes found.
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2016-03-23 10:44:31  progressbar:97          38% complete, 38m 45s elapsed, 1h 2m 35s remaining. 42778 spikes found.
2016-03-23 10:44:31  main:222                Processing chunk <Chunk (60085000/157119840), recording 0>...
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2016-03-23 10:45:02  progressbar:97          38% complete, 39m 16s elapsed, 1h 2m 10s remaining. 43418 spikes found.
2016-03-23 10:45:02  main:222                Processing chunk <Chunk (60833600/157119840), recording 0>...
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2016-03-23 10:46:04  progressbar:97          39% complete, 40m 18s elapsed, 1h 0m 56s remaining. 43997 spikes found.
2016-03-23 10:46:04  main:222                Processing chunk <Chunk (62547500/157119840), recording 0>...
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2016-03-23 10:46:34  progressbar:97          40% complete, 40m 48s elapsed, 1h 0m 36s remaining. 44231 spikes found.
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2016-03-23 10:47:04  progressbar:97          40% complete, 41m 18s elapsed, 59m 53s remaining. 44562 spikes found.
2016-03-23 10:47:04  main:222                Processing chunk <Chunk (64143200/157119840), recording 0>...
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2016-03-23 10:47:35  progressbar:97          41% complete, 41m 49s elapsed, 59m 37s remaining. 45954 spikes found.
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2016-03-23 10:48:05  progressbar:97          41% complete, 42m 19s elapsed, 59m 8s remaining. 47083 spikes found.
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2016-03-23 10:50:42  progressbar:97          43% complete, 44m 55s elapsed, 57m 41s remaining. 50862 spikes found.
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2016-03-23 10:51:43  progressbar:97          44% complete, 45m 57s elapsed, 56m 51s remaining. 52151 spikes found.
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2016-03-23 10:52:13  progressbar:97          45% complete, 46m 27s elapsed, 56m 17s remaining. 52589 spikes found.
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2016-03-23 10:52:43  progressbar:97          45% complete, 46m 57s elapsed, 56m 6s remaining. 52852 spikes found.
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2016-03-23 10:53:14  progressbar:97          45% complete, 47m 28s elapsed, 55m 46s remaining. 53676 spikes found.
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2016-03-23 10:53:44  progressbar:97          46% complete, 47m 58s elapsed, 55m 19s remaining. 54575 spikes found.
2016-03-23 10:53:44  main:222                Processing chunk <Chunk (72968800/157119840), recording 0>...
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2016-03-23 10:54:15  progressbar:97          46% complete, 48m 29s elapsed, 54m 41s remaining. 55665 spikes found.
2016-03-23 10:54:15  main:222                Processing chunk <Chunk (73835600/157119840), recording 0>...
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2016-03-23 10:54:46  progressbar:97          47% complete, 48m 59s elapsed, 54m 39s remaining. 57112 spikes found.
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2016-03-23 10:56:47  progressbar:97          49% complete, 51m 1s elapsed, 52m 57s remaining. 64150 spikes found.
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2016-03-23 10:57:18  progressbar:97          49% complete, 51m 32s elapsed, 52m 43s remaining. 64730 spikes found.
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2016-03-23 10:57:48  progressbar:97          50% complete, 52m 2s elapsed, 51m 55s remaining. 65191 spikes found.
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2016-03-23 10:58:48  progressbar:97          51% complete, 53m 2s elapsed, 50m 26s remaining. 65991 spikes found.
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2016-03-23 10:59:19  progressbar:97          51% complete, 53m 32s elapsed, 49m 50s remaining. 66485 spikes found.
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2016-03-23 10:59:49  progressbar:97          52% complete, 54m 3s elapsed, 49m 18s remaining. 66837 spikes found.
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2016-03-23 11:00:20  progressbar:97          52% complete, 54m 33s elapsed, 48m 52s remaining. 67362 spikes found.
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2016-03-23 11:00:50  progressbar:97          53% complete, 55m 4s elapsed, 48m 26s remaining. 67595 spikes found.
2016-03-23 11:00:50  main:222                Processing chunk <Chunk (83587100/157119840), recording 0>...
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2016-03-23 11:01:20  progressbar:97          53% complete, 55m 34s elapsed, 48m 0s remaining. 67864 spikes found.
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2016-03-23 11:01:53  progressbar:97          54% complete, 56m 7s elapsed, 47m 30s remaining. 68154 spikes found.
2016-03-23 11:01:53  main:222                Processing chunk <Chunk (85084300/157119840), recording 0>...
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2016-03-23 11:02:23  progressbar:97          54% complete, 56m 37s elapsed, 46m 58s remaining. 68439 spikes found.
2016-03-23 11:02:23  main:222                Processing chunk <Chunk (85872300/157119840), recording 0>...
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2016-03-23 11:02:53  progressbar:97          55% complete, 57m 7s elapsed, 46m 26s remaining. 68780 spikes found.
2016-03-23 11:02:53  main:222                Processing chunk <Chunk (86660300/157119840), recording 0>...
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2016-03-23 11:03:23  progressbar:97          55% complete, 57m 37s elapsed, 45m 56s remaining. 69199 spikes found.
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2016-03-23 11:03:54  progressbar:97          56% complete, 58m 8s elapsed, 45m 37s remaining. 69601 spikes found.
2016-03-23 11:03:54  main:222                Processing chunk <Chunk (88039300/157119840), recording 0>...
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2016-03-23 11:04:24  progressbar:97          56% complete, 58m 38s elapsed, 45m 10s remaining. 69929 spikes found.
2016-03-23 11:04:24  main:222                Processing chunk <Chunk (88748500/157119840), recording 0>...
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2016-03-23 11:04:55  progressbar:97          56% complete, 59m 9s elapsed, 44m 44s remaining. 70268 spikes found.
2016-03-23 11:04:55  main:222                Processing chunk <Chunk (89457700/157119840), recording 0>...
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2016-03-23 11:05:25  progressbar:97          57% complete, 59m 39s elapsed, 44m 19s remaining. 71454 spikes found.
2016-03-23 11:05:25  main:222                Processing chunk <Chunk (90147200/157119840), recording 0>...
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2016-03-23 11:05:56  progressbar:97          57% complete, 1h 0m 10s elapsed, 43m 46s remaining. 71972 spikes found.
2016-03-23 11:05:56  main:222                Processing chunk <Chunk (90954900/157119840), recording 0>...
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2016-03-23 11:06:26  progressbar:97          58% complete, 1h 0m 40s elapsed, 43m 19s remaining. 72510 spikes found.
2016-03-23 11:06:26  main:222                Processing chunk <Chunk (91664100/157119840), recording 0>...
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2016-03-23 11:06:57  progressbar:97          58% complete, 1h 1m 10s elapsed, 42m 54s remaining. 72786 spikes found.
2016-03-23 11:06:57  main:222                Processing chunk <Chunk (92353600/157119840), recording 0>...
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2016-03-23 11:07:27  progressbar:97          59% complete, 1h 1m 41s elapsed, 42m 24s remaining. 73690 spikes found.
2016-03-23 11:07:27  main:222                Processing chunk <Chunk (93121900/157119840), recording 0>...
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2016-03-23 11:07:57  progressbar:97          59% complete, 1h 2m 11s elapsed, 42m 6s remaining. 73886 spikes found.
2016-03-23 11:07:57  main:222                Processing chunk <Chunk (93693200/157119840), recording 0>...
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2016-03-23 11:08:29  progressbar:97          59% complete, 1h 2m 43s elapsed, 41m 59s remaining. 74418 spikes found.
2016-03-23 11:08:29  main:222                Processing chunk <Chunk (94106900/157119840), recording 0>...
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2016-03-23 11:08:59  progressbar:97          60% complete, 1h 3m 13s elapsed, 41m 45s remaining. 74950 spikes found.
2016-03-23 11:08:59  main:222                Processing chunk <Chunk (94619100/157119840), recording 0>...
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2016-03-23 11:09:29  progressbar:97          60% complete, 1h 3m 43s elapsed, 41m 37s remaining. 75132 spikes found.
2016-03-23 11:09:29  main:222                Processing chunk <Chunk (95032800/157119840), recording 0>...
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2016-03-23 11:10:01  progressbar:97          60% complete, 1h 4m 14s elapsed, 41m 29s remaining. 75302 spikes found.
2016-03-23 11:10:01  main:222                Processing chunk <Chunk (95466200/157119840), recording 0>...
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2016-03-23 11:10:31  progressbar:97          61% complete, 1h 4m 45s elapsed, 41m 17s remaining. 75709 spikes found.
2016-03-23 11:10:31  main:222                Processing chunk <Chunk (95939000/157119840), recording 0>...
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2016-03-23 11:11:02  progressbar:97          61% complete, 1h 5m 16s elapsed, 41m 4s remaining. 76360 spikes found.
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2016-03-23 11:11:32  progressbar:97          61% complete, 1h 5m 46s elapsed, 40m 56s remaining. 76744 spikes found.
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2016-03-23 11:12:02  progressbar:97          61% complete, 1h 6m 16s elapsed, 40m 38s remaining. 77119 spikes found.
2016-03-23 11:12:02  main:222                Processing chunk <Chunk (97396800/157119840), recording 0>...
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2016-03-23 11:12:33  progressbar:97          62% complete, 1h 6m 47s elapsed, 40m 10s remaining. 78228 spikes found.
2016-03-23 11:12:33  main:222                Processing chunk <Chunk (98106000/157119840), recording 0>...
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2016-03-23 11:13:03  progressbar:97          62% complete, 1h 7m 17s elapsed, 39m 39s remaining. 79067 spikes found.
2016-03-23 11:13:03  main:222                Processing chunk <Chunk (98854600/157119840), recording 0>...
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2016-03-23 11:13:34  progressbar:97          63% complete, 1h 7m 47s elapsed, 39m 2s remaining. 80685 spikes found.
2016-03-23 11:13:34  main:222                Processing chunk <Chunk (99701700/157119840), recording 0>...
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2016-03-23 11:15:04  progressbar:97          64% complete, 1h 9m 18s elapsed, 37m 23s remaining. 85803 spikes found.
2016-03-23 11:15:04  main:222                Processing chunk <Chunk (102065700/157119840), recording 0>...
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2016-03-23 11:16:05  progressbar:97          66% complete, 1h 10m 19s elapsed, 35m 55s remaining. 88456 spikes found.
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2016-03-23 11:16:35  progressbar:97          66% complete, 1h 10m 49s elapsed, 35m 30s remaining. 89227 spikes found.
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2016-03-23 11:19:36  progressbar:97          70% complete, 1h 13m 50s elapsed, 31m 11s remaining. 95866 spikes found.
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2016-03-23 11:20:06  progressbar:97          70% complete, 1h 14m 20s elapsed, 30m 47s remaining. 98437 spikes found.
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2016-03-23 11:20:36  progressbar:97          71% complete, 1h 14m 50s elapsed, 30m 13s remaining. 100959 spikes found.
2016-03-23 11:20:36  main:222                Processing chunk <Chunk (111915700/157119840), recording 0>...
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2016-03-23 11:21:07  progressbar:97          71% complete, 1h 15m 20s elapsed, 29m 54s remaining. 102119 spikes found.
2016-03-23 11:21:07  main:222                Processing chunk <Chunk (112467300/157119840), recording 0>...
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2016-03-23 11:21:37  progressbar:97          72% complete, 1h 15m 51s elapsed, 29m 17s remaining. 104497 spikes found.
2016-03-23 11:21:37  main:222                Processing chunk <Chunk (113353800/157119840), recording 0>...
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2016-03-23 11:40:25  progressbar:97          94% complete, 1h 34m 39s elapsed, 5m 24s remaining. 131328 spikes found.
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2016-03-23 11:40:59  progressbar:97          95% complete, 1h 35m 12s elapsed, 4m 59s remaining. 132468 spikes found.
2016-03-23 11:40:59  main:222                Processing chunk <Chunk (149286600/157119840), recording 0>...
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2016-03-23 11:41:29  progressbar:97          95% complete, 1h 35m 42s elapsed, 4m 28s remaining. 133229 spikes found.
2016-03-23 11:41:29  main:222                Processing chunk <Chunk (150094300/157119840), recording 0>...
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2016-03-23 11:42:04  progressbar:97          95% complete, 1h 36m 18s elapsed, 4m 5s remaining. 134111 spikes found.
2016-03-23 11:42:04  main:222                Processing chunk <Chunk (150705000/157119840), recording 0>...
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2016-03-23 11:42:35  progressbar:97          96% complete, 1h 36m 49s elapsed, 3m 45s remaining. 134987 spikes found.
2016-03-23 11:42:35  main:222                Processing chunk <Chunk (151236900/157119840), recording 0>...
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2016-03-23 11:43:05  progressbar:97          96% complete, 1h 37m 19s elapsed, 3m 23s remaining. 135276 spikes found.
2016-03-23 11:43:05  main:222                Processing chunk <Chunk (151827900/157119840), recording 0>...
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2016-03-23 11:43:35  progressbar:97          97% complete, 1h 37m 49s elapsed, 2m 58s remaining. 135923 spikes found.
2016-03-23 11:43:35  main:222                Processing chunk <Chunk (152478000/157119840), recording 0>...
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2016-03-23 11:46:06  main:222                Processing chunk <Chunk (156989300/157119840), recording 0>...
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2016-03-23 11:46:07  main:222                Processing chunk <Chunk (157028700/157119840), recording 0>...
2016-03-23 11:46:07  progressbar:97          99% complete, 1h 40m 21s elapsed, 2s remaining. 141031 spikes found.
2016-03-23 11:46:07  main:222                Processing chunk <Chunk (157048400/157119840), recording 0>...
2016-03-23 11:46:08  main:222                Processing chunk <Chunk (157068100/157119840), recording 0>...
2016-03-23 11:46:08  main:222                Processing chunk <Chunk (157087800/157119840), recording 0>...
2016-03-23 11:46:09  main:222                Processing chunk <Chunk (157107500/157119840), recording 0>...
2016-03-23 11:46:09  progressbar:97          100% complete, 1h 40m 23s elapsed, 0s remaining. 141063 spikes found.