2016-03-23 12:56:38  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /zpool/tingley/DT2/DT2_rPPC_rCCG_3612um_1360um_20160305_160305_141507/DT2_rPPC_rCCG_3612um_1360um_20160305_160305_141507.dat>
2016-03-23 12:56:38  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/zpool/tingley/DT2/DT2_rPPC_rCCG_3612um_1360um_20160305_160305_141507/1/DT2_rPPC_rCCG_3612um_1360um_20160305_160305_141507_sh1',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 500.0,
 'nbits': 16,
 'nchannels': 128,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '1.prb',
 'raw_data_files': ['/zpool/tingley/DT2/DT2_rPPC_rCCG_3612um_1360um_20160305_160305_141507/DT2_rPPC_rCCG_3612um_1360um_20160305_160305_141507.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': True,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2016-03-23 12:58:34  main:200                Threshold: DoubleThreshold(strong=array([ 267.14686109]), weak=array([ 118.73193826]))
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2016-03-23 12:58:34  progressbar:97          0% complete, 0s elapsed. 36 spikes found.
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2016-03-23 12:59:04  progressbar:97          1% complete, 30s elapsed, 46m 15s remaining. 926 spikes found.
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2016-03-23 12:59:35  progressbar:97          2% complete, 1m 0s elapsed, 40m 29s remaining. 1842 spikes found.
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2016-03-23 13:00:05  progressbar:97          3% complete, 1m 31s elapsed, 40m 20s remaining. 3955 spikes found.
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2016-03-23 13:07:39  progressbar:97          25% complete, 9m 5s elapsed, 26m 59s remaining. 13505 spikes found.
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2016-03-23 13:08:10  progressbar:97          26% complete, 9m 36s elapsed, 27m 3s remaining. 13865 spikes found.
2016-03-23 13:08:10  main:222                Processing chunk <Chunk (23640000/90239760), recording 0>...
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2016-03-23 13:08:42  progressbar:97          26% complete, 10m 8s elapsed, 27m 43s remaining. 14082 spikes found.
2016-03-23 13:08:42  main:222                Processing chunk <Chunk (24152200/90239760), recording 0>...
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2016-03-23 13:09:12  progressbar:97          27% complete, 10m 38s elapsed, 28m 17s remaining. 14275 spikes found.
2016-03-23 13:09:12  main:222                Processing chunk <Chunk (24664400/90239760), recording 0>...
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2016-03-23 13:09:43  progressbar:97          28% complete, 11m 9s elapsed, 28m 33s remaining. 14575 spikes found.
2016-03-23 13:09:43  main:222                Processing chunk <Chunk (25353900/90239760), recording 0>...
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2016-03-23 13:10:16  progressbar:97          28% complete, 11m 41s elapsed, 29m 9s remaining. 14801 spikes found.
2016-03-23 13:10:16  main:222                Processing chunk <Chunk (25826700/90239760), recording 0>...
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2016-03-23 13:10:47  progressbar:97          29% complete, 12m 13s elapsed, 29m 41s remaining. 15088 spikes found.
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2016-03-23 13:11:17  progressbar:97          29% complete, 12m 43s elapsed, 29m 45s remaining. 15717 spikes found.
2016-03-23 13:11:17  main:222                Processing chunk <Chunk (27028400/90239760), recording 0>...
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2016-03-23 13:11:48  progressbar:97          30% complete, 13m 14s elapsed, 29m 40s remaining. 16485 spikes found.
2016-03-23 13:11:48  main:222                Processing chunk <Chunk (27836100/90239760), recording 0>...
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2016-03-23 13:12:19  progressbar:97          31% complete, 13m 45s elapsed, 29m 34s remaining. 16954 spikes found.
2016-03-23 13:12:19  main:222                Processing chunk <Chunk (28643800/90239760), recording 0>...
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2016-03-23 13:12:49  progressbar:97          32% complete, 14m 15s elapsed, 29m 20s remaining. 17437 spikes found.
2016-03-23 13:12:49  main:222                Processing chunk <Chunk (29510600/90239760), recording 0>...
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2016-03-23 13:13:20  progressbar:97          33% complete, 14m 45s elapsed, 29m 5s remaining. 17757 spikes found.
2016-03-23 13:13:20  main:222                Processing chunk <Chunk (30377400/90239760), recording 0>...
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2016-03-23 13:13:50  progressbar:97          34% complete, 15m 16s elapsed, 28m 55s remaining. 18132 spikes found.
2016-03-23 13:13:50  main:222                Processing chunk <Chunk (31185100/90239760), recording 0>...
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2016-03-23 13:14:52  progressbar:97          36% complete, 16m 18s elapsed, 28m 29s remaining. 20099 spikes found.
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2016-03-23 13:15:22  progressbar:97          37% complete, 16m 48s elapsed, 28m 20s remaining. 20536 spikes found.
2016-03-23 13:15:22  main:222                Processing chunk <Chunk (33588500/90239760), recording 0>...
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2016-03-23 13:15:53  progressbar:97          38% complete, 17m 19s elapsed, 27m 53s remaining. 20805 spikes found.
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2016-03-23 13:16:25  progressbar:97          39% complete, 17m 51s elapsed, 27m 48s remaining. 21021 spikes found.
2016-03-23 13:16:25  main:222                Processing chunk <Chunk (35282700/90239760), recording 0>...
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2016-03-23 13:16:55  progressbar:97          39% complete, 18m 21s elapsed, 27m 40s remaining. 21174 spikes found.
2016-03-23 13:16:55  main:222                Processing chunk <Chunk (35991900/90239760), recording 0>...
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2016-03-23 13:17:26  progressbar:97          40% complete, 18m 52s elapsed, 27m 15s remaining. 21702 spikes found.
2016-03-23 13:17:26  main:222                Processing chunk <Chunk (36917800/90239760), recording 0>...
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2016-03-23 13:17:57  progressbar:97          41% complete, 19m 23s elapsed, 27m 11s remaining. 22856 spikes found.
2016-03-23 13:17:57  main:222                Processing chunk <Chunk (37567900/90239760), recording 0>...
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2016-03-23 13:18:27  progressbar:97          42% complete, 19m 53s elapsed, 26m 56s remaining. 23061 spikes found.
2016-03-23 13:18:27  main:222                Processing chunk <Chunk (38336200/90239760), recording 0>...
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2016-03-23 13:18:59  progressbar:97          43% complete, 20m 25s elapsed, 26m 41s remaining. 23450 spikes found.
2016-03-23 13:18:59  main:222                Processing chunk <Chunk (39124200/90239760), recording 0>...
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2016-03-23 13:19:30  progressbar:97          44% complete, 20m 55s elapsed, 26m 33s remaining. 23978 spikes found.
2016-03-23 13:19:30  main:222                Processing chunk <Chunk (39774300/90239760), recording 0>...
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2016-03-23 13:20:00  progressbar:97          44% complete, 21m 26s elapsed, 26m 36s remaining. 24848 spikes found.
2016-03-23 13:20:00  main:222                Processing chunk <Chunk (40266800/90239760), recording 0>...
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2016-03-23 13:20:30  progressbar:97          45% complete, 21m 56s elapsed, 26m 37s remaining. 25607 spikes found.
2016-03-23 13:20:30  main:222                Processing chunk <Chunk (40759300/90239760), recording 0>...
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2016-03-23 13:21:01  progressbar:97          45% complete, 22m 27s elapsed, 26m 31s remaining. 26188 spikes found.
2016-03-23 13:21:01  main:222                Processing chunk <Chunk (41370000/90239760), recording 0>...
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2016-03-23 13:21:33  progressbar:97          46% complete, 22m 59s elapsed, 26m 28s remaining. 26401 spikes found.
2016-03-23 13:21:33  main:222                Processing chunk <Chunk (41941300/90239760), recording 0>...
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2016-03-23 13:22:04  progressbar:97          47% complete, 23m 29s elapsed, 26m 11s remaining. 26807 spikes found.
2016-03-23 13:22:04  main:222                Processing chunk <Chunk (42670200/90239760), recording 0>...
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2016-03-23 13:22:34  progressbar:97          47% complete, 24m 0s elapsed, 26m 2s remaining. 27012 spikes found.
2016-03-23 13:22:34  main:222                Processing chunk <Chunk (43280900/90239760), recording 0>...
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2016-03-23 13:24:36  progressbar:97          51% complete, 26m 1s elapsed, 24m 14s remaining. 28745 spikes found.
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2016-03-23 13:25:06  progressbar:97          52% complete, 26m 32s elapsed, 23m 53s remaining. 29186 spikes found.
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2016-03-23 13:28:38  progressbar:97          59% complete, 30m 4s elapsed, 20m 44s remaining. 33352 spikes found.
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2016-03-23 13:29:08  progressbar:97          60% complete, 30m 34s elapsed, 20m 22s remaining. 34286 spikes found.
2016-03-23 13:29:08  main:222                Processing chunk <Chunk (54155300/90239760), recording 0>...
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2016-03-23 13:29:39  progressbar:97          61% complete, 31m 4s elapsed, 19m 49s remaining. 35174 spikes found.
2016-03-23 13:29:39  main:222                Processing chunk <Chunk (55100900/90239760), recording 0>...
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2016-03-23 13:30:10  progressbar:97          61% complete, 31m 35s elapsed, 19m 28s remaining. 35964 spikes found.
2016-03-23 13:30:10  main:222                Processing chunk <Chunk (55829800/90239760), recording 0>...
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2016-03-23 13:30:40  progressbar:97          62% complete, 32m 6s elapsed, 19m 7s remaining. 36642 spikes found.
2016-03-23 13:30:40  main:222                Processing chunk <Chunk (56558700/90239760), recording 0>...
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2016-03-23 13:31:12  progressbar:97          63% complete, 32m 37s elapsed, 19m 0s remaining. 37179 spikes found.
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2016-03-23 13:31:42  progressbar:97          63% complete, 33m 7s elapsed, 18m 38s remaining. 37716 spikes found.
2016-03-23 13:31:42  main:222                Processing chunk <Chunk (57740700/90239760), recording 0>...
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2016-03-23 13:32:12  progressbar:97          64% complete, 33m 38s elapsed, 18m 13s remaining. 38024 spikes found.
2016-03-23 13:32:12  main:222                Processing chunk <Chunk (58528700/90239760), recording 0>...
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2016-03-23 13:32:42  progressbar:97          65% complete, 34m 8s elapsed, 17m 50s remaining. 39250 spikes found.
2016-03-23 13:32:42  main:222                Processing chunk <Chunk (59257600/90239760), recording 0>...
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2016-03-23 13:33:12  progressbar:97          66% complete, 34m 38s elapsed, 17m 26s remaining. 39652 spikes found.
2016-03-23 13:33:12  main:222                Processing chunk <Chunk (60025900/90239760), recording 0>...
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2016-03-23 13:33:43  progressbar:97          67% complete, 35m 8s elapsed, 16m 58s remaining. 39759 spikes found.
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2016-03-23 13:34:43  progressbar:97          69% complete, 36m 9s elapsed, 15m 52s remaining. 40229 spikes found.
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2016-03-23 13:35:45  progressbar:97          71% complete, 37m 11s elapsed, 14m 58s remaining. 40521 spikes found.
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2016-03-23 13:36:46  progressbar:97          73% complete, 38m 12s elapsed, 13m 53s remaining. 42192 spikes found.
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2016-03-23 13:37:49  progressbar:97          74% complete, 39m 14s elapsed, 13m 9s remaining. 44211 spikes found.
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2016-03-23 13:38:19  progressbar:97          75% complete, 39m 45s elapsed, 12m 55s remaining. 45115 spikes found.
2016-03-23 13:38:19  main:222                Processing chunk <Chunk (68102900/90239760), recording 0>...
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2016-03-23 13:38:49  progressbar:97          76% complete, 40m 15s elapsed, 12m 33s remaining. 45744 spikes found.
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2016-03-23 13:39:21  progressbar:97          77% complete, 40m 47s elapsed, 12m 6s remaining. 46161 spikes found.
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2016-03-23 13:39:52  progressbar:97          77% complete, 41m 17s elapsed, 11m 42s remaining. 46523 spikes found.
2016-03-23 13:39:52  main:222                Processing chunk <Chunk (70309300/90239760), recording 0>...
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2016-03-23 13:40:22  progressbar:97          78% complete, 41m 47s elapsed, 11m 28s remaining. 46798 spikes found.
2016-03-23 13:40:22  main:222                Processing chunk <Chunk (70801800/90239760), recording 0>...
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2016-03-23 13:40:52  progressbar:97          79% complete, 42m 17s elapsed, 10m 55s remaining. 47310 spikes found.
2016-03-23 13:40:52  main:222                Processing chunk <Chunk (71727700/90239760), recording 0>...
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2016-03-23 13:41:22  progressbar:97          80% complete, 42m 48s elapsed, 10m 27s remaining. 47649 spikes found.
2016-03-23 13:41:22  main:222                Processing chunk <Chunk (72515700/90239760), recording 0>...
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2016-03-23 13:41:52  progressbar:97          81% complete, 43m 18s elapsed, 10m 8s remaining. 48436 spikes found.
2016-03-23 13:41:52  main:222                Processing chunk <Chunk (73106700/90239760), recording 0>...
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2016-03-23 13:42:23  progressbar:97          81% complete, 43m 48s elapsed, 9m 44s remaining. 49622 spikes found.
2016-03-23 13:42:23  main:222                Processing chunk <Chunk (73835600/90239760), recording 0>...
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2016-03-23 13:43:55  progressbar:97          84% complete, 45m 21s elapsed, 8m 28s remaining. 52166 spikes found.
2016-03-23 13:43:55  main:222                Processing chunk <Chunk (76022300/90239760), recording 0>...
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2016-03-23 13:44:26  progressbar:97          85% complete, 45m 51s elapsed, 7m 59s remaining. 53446 spikes found.
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2016-03-23 13:44:56  progressbar:97          86% complete, 46m 22s elapsed, 7m 30s remaining. 54778 spikes found.
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2016-03-23 13:45:27  progressbar:97          87% complete, 46m 52s elapsed, 6m 58s remaining. 55869 spikes found.
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2016-03-23 13:50:30  progressbar:97          97% complete, 51m 55s elapsed, 1m 21s remaining. 62489 spikes found.
2016-03-23 13:50:30  main:222                Processing chunk <Chunk (87940800/90239760), recording 0>...
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2016-03-23 13:51:00  progressbar:97          98% complete, 52m 26s elapsed, 39s remaining. 62579 spikes found.
2016-03-23 13:51:00  main:222                Processing chunk <Chunk (89122800/90239760), recording 0>...
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2016-03-23 13:51:30  progressbar:97          99% complete, 52m 56s elapsed, 7s remaining. 62915 spikes found.
2016-03-23 13:51:30  main:222                Processing chunk <Chunk (90029000/90239760), recording 0>...
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2016-03-23 13:51:36  progressbar:97          100% complete, 53m 1s elapsed, 0s remaining. 62986 spikes found.