2016-04-18 07:52:34  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /zpool/tingley/DT2/DT2_rPPC_rCCG_794um_290um_20160210_160210_225301/DT2_rPPC_rCCG_794um_290um_20160210_160210_225301.dat>
2016-04-18 07:52:34  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/zpool/tingley/DT2/DT2_rPPC_rCCG_794um_290um_20160210_160210_225301/13/DT2_rPPC_rCCG_794um_290um_20160210_160210_225301_sh13',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 500.0,
 'nbits': 16,
 'nchannels': 128,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '13.prb',
 'raw_data_files': ['/zpool/tingley/DT2/DT2_rPPC_rCCG_794um_290um_20160210_160210_225301/DT2_rPPC_rCCG_794um_290um_20160210_160210_225301.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': True,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2016-04-18 07:53:18  main:200                Threshold: DoubleThreshold(strong=array([ 295.73724039]), weak=array([ 131.43877351]))
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2016-04-18 07:53:19  progressbar:97          0% complete, 0s elapsed. 32 spikes found.
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2016-04-18 07:53:49  progressbar:97          0% complete, 30s elapsed, 54m 3s remaining. 3012 spikes found.
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2016-04-18 07:54:19  progressbar:97          1% complete, 1m 0s elapsed, 52m 36s remaining. 4897 spikes found.
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2016-04-18 07:54:50  progressbar:97          2% complete, 1m 31s elapsed, 51m 20s remaining. 7720 spikes found.
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2016-04-18 07:58:52  progressbar:97          10% complete, 5m 33s elapsed, 47m 38s remaining. 19237 spikes found.
2016-04-18 07:58:52  main:222                Processing chunk <Chunk (15031100/143910000), recording 0>...
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2016-04-18 07:59:22  progressbar:97          11% complete, 6m 3s elapsed, 46m 33s remaining. 20471 spikes found.
2016-04-18 07:59:22  main:222                Processing chunk <Chunk (16567700/143910000), recording 0>...
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2016-04-18 07:59:52  progressbar:97          12% complete, 6m 33s elapsed, 46m 58s remaining. 21609 spikes found.
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2016-04-18 08:04:56  main:222                Processing chunk <Chunk (29451500/143910000), recording 0>...
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2016-04-18 08:05:26  progressbar:97          21% complete, 12m 7s elapsed, 44m 21s remaining. 34394 spikes found.
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2016-04-18 08:13:04  progressbar:97          33% complete, 19m 45s elapsed, 39m 49s remaining. 59752 spikes found.
2016-04-18 08:13:04  main:222                Processing chunk <Chunk (47713400/143910000), recording 0>...
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2016-04-18 08:13:35  progressbar:97          33% complete, 20m 16s elapsed, 39m 46s remaining. 62071 spikes found.
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2016-04-18 08:14:05  progressbar:97          34% complete, 20m 46s elapsed, 39m 17s remaining. 64712 spikes found.
2016-04-18 08:14:05  main:222                Processing chunk <Chunk (49781900/143910000), recording 0>...
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2016-04-18 08:17:08  main:222                Processing chunk <Chunk (55967700/143910000), recording 0>...
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2016-04-18 08:18:09  main:222                Processing chunk <Chunk (58055900/143910000), recording 0>...
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2016-04-18 08:18:39  progressbar:97          41% complete, 25m 20s elapsed, 36m 6s remaining. 88551 spikes found.
2016-04-18 08:18:39  main:222                Processing chunk <Chunk (59356100/143910000), recording 0>...
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2016-04-18 08:19:09  progressbar:97          41% complete, 25m 51s elapsed, 35m 58s remaining. 90782 spikes found.
2016-04-18 08:19:09  main:222                Processing chunk <Chunk (60163800/143910000), recording 0>...
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2016-04-18 08:19:40  progressbar:97          42% complete, 26m 21s elapsed, 35m 48s remaining. 93127 spikes found.
2016-04-18 08:19:40  main:222                Processing chunk <Chunk (61010900/143910000), recording 0>...
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2016-04-18 08:20:10  progressbar:97          43% complete, 26m 51s elapsed, 35m 33s remaining. 95593 spikes found.
2016-04-18 08:20:10  main:222                Processing chunk <Chunk (61936800/143910000), recording 0>...
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2016-04-18 08:20:41  progressbar:97          43% complete, 27m 22s elapsed, 35m 3s remaining. 97633 spikes found.
2016-04-18 08:20:41  main:222                Processing chunk <Chunk (63099100/143910000), recording 0>...
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2016-04-18 08:22:42  progressbar:97          46% complete, 29m 23s elapsed, 33m 50s remaining. 106063 spikes found.
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2016-04-18 08:28:16  progressbar:97          55% complete, 34m 57s elapsed, 28m 33s remaining. 130160 spikes found.
2016-04-18 08:28:16  main:222                Processing chunk <Chunk (79194000/143910000), recording 0>...
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2016-04-18 08:28:46  progressbar:97          55% complete, 35m 27s elapsed, 28m 29s remaining. 131234 spikes found.
2016-04-18 08:28:46  main:222                Processing chunk <Chunk (79785000/143910000), recording 0>...
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2016-04-18 08:29:17  main:222                Processing chunk <Chunk (80888200/143910000), recording 0>...
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2016-04-18 08:29:47  progressbar:97          56% complete, 36m 28s elapsed, 27m 39s remaining. 134397 spikes found.
2016-04-18 08:29:47  main:222                Processing chunk <Chunk (81853500/143910000), recording 0>...
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2016-04-18 08:30:17  progressbar:97          57% complete, 36m 58s elapsed, 27m 11s remaining. 135944 spikes found.
2016-04-18 08:30:17  main:222                Processing chunk <Chunk (82937000/143910000), recording 0>...
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2016-04-18 08:30:47  progressbar:97          58% complete, 37m 29s elapsed, 26m 54s remaining. 137603 spikes found.
2016-04-18 08:30:47  main:222                Processing chunk <Chunk (83764400/143910000), recording 0>...
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2016-04-18 08:31:18  progressbar:97          59% complete, 37m 59s elapsed, 26m 23s remaining. 139472 spikes found.
2016-04-18 08:31:18  main:222                Processing chunk <Chunk (84907000/143910000), recording 0>...
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2016-04-18 08:31:48  progressbar:97          59% complete, 38m 29s elapsed, 25m 58s remaining. 141115 spikes found.
2016-04-18 08:31:48  main:222                Processing chunk <Chunk (85931400/143910000), recording 0>...
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2016-04-18 08:35:24  progressbar:97          63% complete, 42m 5s elapsed, 23m 41s remaining. 151456 spikes found.
2016-04-18 08:35:24  main:222                Processing chunk <Chunk (92077800/143910000), recording 0>...
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2016-04-18 08:35:56  progressbar:97          64% complete, 42m 37s elapsed, 23m 28s remaining. 152952 spikes found.
2016-04-18 08:35:56  main:222                Processing chunk <Chunk (92806700/143910000), recording 0>...
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2016-04-18 08:36:26  progressbar:97          65% complete, 43m 7s elapsed, 23m 10s remaining. 154841 spikes found.
2016-04-18 08:36:26  main:222                Processing chunk <Chunk (93614400/143910000), recording 0>...
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2016-04-18 08:36:58  progressbar:97          65% complete, 43m 39s elapsed, 22m 46s remaining. 156851 spikes found.
2016-04-18 08:36:58  main:222                Processing chunk <Chunk (94579700/143910000), recording 0>...
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2016-04-18 08:37:28  progressbar:97          66% complete, 44m 9s elapsed, 22m 28s remaining. 158563 spikes found.
2016-04-18 08:37:28  main:222                Processing chunk <Chunk (95367700/143910000), recording 0>...
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2016-04-18 08:37:58  progressbar:97          66% complete, 44m 39s elapsed, 22m 7s remaining. 160385 spikes found.
2016-04-18 08:37:58  main:222                Processing chunk <Chunk (96234500/143910000), recording 0>...
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2016-04-18 08:38:30  progressbar:97          67% complete, 45m 11s elapsed, 21m 44s remaining. 163237 spikes found.
2016-04-18 08:38:30  main:222                Processing chunk <Chunk (97180100/143910000), recording 0>...
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2016-04-18 08:39:03  progressbar:97          68% complete, 45m 44s elapsed, 21m 26s remaining. 165275 spikes found.
2016-04-18 08:39:03  main:222                Processing chunk <Chunk (97987800/143910000), recording 0>...
2016-04-18 08:39:03  main:222                Processing chunk <Chunk (98007500/143910000), recording 0>...
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2016-04-18 08:39:33  progressbar:97          68% complete, 46m 14s elapsed, 21m 8s remaining. 167308 spikes found.
2016-04-18 08:39:33  main:222                Processing chunk <Chunk (98756100/143910000), recording 0>...
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2016-04-18 08:40:04  progressbar:97          69% complete, 46m 45s elapsed, 20m 56s remaining. 168855 spikes found.
2016-04-18 08:40:04  main:222                Processing chunk <Chunk (99406200/143910000), recording 0>...
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2016-04-18 08:40:34  progressbar:97          69% complete, 47m 15s elapsed, 20m 38s remaining. 170461 spikes found.
2016-04-18 08:40:34  main:222                Processing chunk <Chunk (100154800/143910000), recording 0>...
2016-04-18 08:40:36  main:222                Processing chunk <Chunk (100174500/143910000), recording 0>...
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2016-04-18 08:41:05  progressbar:97          70% complete, 47m 46s elapsed, 20m 20s remaining. 172027 spikes found.
2016-04-18 08:41:05  main:222                Processing chunk <Chunk (100942800/143910000), recording 0>...
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2016-04-18 08:41:37  progressbar:97          70% complete, 48m 18s elapsed, 20m 2s remaining. 173837 spikes found.
2016-04-18 08:41:37  main:222                Processing chunk <Chunk (101711100/143910000), recording 0>...
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2016-04-18 08:42:07  progressbar:97          71% complete, 48m 48s elapsed, 19m 44s remaining. 175611 spikes found.
2016-04-18 08:42:07  main:222                Processing chunk <Chunk (102459700/143910000), recording 0>...
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2016-04-18 08:42:38  progressbar:97          71% complete, 49m 19s elapsed, 19m 12s remaining. 178294 spikes found.
2016-04-18 08:42:38  main:222                Processing chunk <Chunk (103582600/143910000), recording 0>...
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2016-04-18 08:44:09  progressbar:97          73% complete, 50m 50s elapsed, 17m 59s remaining. 184308 spikes found.
2016-04-18 08:44:09  main:222                Processing chunk <Chunk (106301200/143910000), recording 0>...
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2016-04-18 08:44:40  progressbar:97          74% complete, 51m 21s elapsed, 17m 43s remaining. 185936 spikes found.
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2016-04-18 08:45:10  progressbar:97          75% complete, 51m 51s elapsed, 17m 16s remaining. 187761 spikes found.
2016-04-18 08:45:10  main:222                Processing chunk <Chunk (107956000/143910000), recording 0>...
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2016-04-18 08:45:41  progressbar:97          75% complete, 52m 22s elapsed, 16m 55s remaining. 188747 spikes found.
2016-04-18 08:45:41  main:222                Processing chunk <Chunk (108763700/143910000), recording 0>...
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2016-04-18 08:46:12  progressbar:97          76% complete, 52m 53s elapsed, 16m 39s remaining. 190035 spikes found.
2016-04-18 08:46:12  main:222                Processing chunk <Chunk (109433500/143910000), recording 0>...
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2016-04-18 08:46:42  progressbar:97          76% complete, 53m 24s elapsed, 16m 17s remaining. 191839 spikes found.
2016-04-18 08:46:42  main:222                Processing chunk <Chunk (110280600/143910000), recording 0>...
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2016-04-18 08:47:13  progressbar:97          77% complete, 53m 54s elapsed, 15m 45s remaining. 194233 spikes found.
2016-04-18 08:47:13  main:222                Processing chunk <Chunk (111364100/143910000), recording 0>...
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2016-04-18 08:47:43  progressbar:97          77% complete, 54m 24s elapsed, 15m 24s remaining. 196040 spikes found.
2016-04-18 08:47:43  main:222                Processing chunk <Chunk (112152100/143910000), recording 0>...
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2016-04-18 08:48:13  progressbar:97          78% complete, 54m 54s elapsed, 14m 59s remaining. 198432 spikes found.
2016-04-18 08:48:13  main:222                Processing chunk <Chunk (113038600/143910000), recording 0>...
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2016-04-18 08:51:46  main:222                Processing chunk <Chunk (119638100/143910000), recording 0>...
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2016-04-18 08:52:17  progressbar:97          83% complete, 58m 58s elapsed, 11m 25s remaining. 216349 spikes found.
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2016-04-18 08:52:48  progressbar:97          84% complete, 59m 29s elapsed, 11m 0s remaining. 218231 spikes found.
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2016-04-18 09:02:27  progressbar:97          96% complete, 1h 9m 8s elapsed, 2m 9s remaining. 253033 spikes found.
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2016-04-18 09:02:59  progressbar:97          97% complete, 1h 9m 40s elapsed, 1m 36s remaining. 254843 spikes found.
2016-04-18 09:02:59  main:222                Processing chunk <Chunk (140658000/143910000), recording 0>...
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2016-04-18 09:03:29  progressbar:97          98% complete, 1h 10m 10s elapsed, 1m 5s remaining. 256517 spikes found.
2016-04-18 09:03:29  main:222                Processing chunk <Chunk (141721800/143910000), recording 0>...
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2016-04-18 09:04:00  progressbar:97          99% complete, 1h 10m 41s elapsed, 31s remaining. 258604 spikes found.
2016-04-18 09:04:00  main:222                Processing chunk <Chunk (142844700/143910000), recording 0>...
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2016-04-18 09:04:28  progressbar:97          100% complete, 1h 11m 9s elapsed, 0s remaining. 261756 spikes found.