2016-10-07 01:00:31  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /zpool/tingley/DT5/20161006_648um_684um_161006_092246/20161006_648um_684um_161006_092246.dat>
2016-10-07 01:00:31  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/zpool/tingley/DT5/20161006_648um_684um_161006_092246/1/20161006_648um_684um_161006_092246_sh1',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 500.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '1.prb',
 'raw_data_files': ['/zpool/tingley/DT5/20161006_648um_684um_161006_092246/20161006_648um_684um_161006_092246.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2016-10-07 01:01:02  main:200                Threshold: DoubleThreshold(strong=array([ 288.07527112,  282.28217845,  295.34197099,  290.53063559,
        295.00040527,  289.43788136,  296.42520462,  273.82308335,
        271.89688758,  270.84322571,  274.10059574,  280.91116221,
        270.6511138 ,  290.59685443,  283.35442888,  278.59227693,
        293.19407721,  278.92051988,  277.34594868,  276.52671699,
        277.7995429 ,  276.47912253,  272.39347652,  274.29718298,
        272.20517904,  281.56298567,  291.03397682,  291.75978933,
        278.33780258,  289.37097091,  293.95536206,  283.69957777,
        282.30059075,  282.6336225 ,  280.64678839,  279.88968162,
        277.20665787,  283.41961832,  272.4828835 ,  266.00856687,
        274.54461008,  282.67555761,  269.22371786,  272.0802226 ,
        272.91943821,  267.16752558,  262.93179617,  271.96737644,
        300.04645705,  297.60260362,  329.3383691 ,  310.46130097,
        291.15253909,  285.98551682,  291.1916357 ,  292.01760182,
        292.22757065,  298.55037986,  292.02457406,  288.71632909,
        292.13858398,  286.31136048,  300.78930577,  293.08822379,
        284.05854675,  279.48396171,  281.7113495 ,  284.992794  ,
        281.66710653,  283.04659595,  285.30576295,  290.76807015,
        279.20738133,  281.56056438,  282.41274729,  281.34942901,
        284.82030801,  293.44914324,  290.85908902,  289.49259284,
        265.02782049,  271.24554536,  267.50966323,  269.32420988,
        269.79700205,  267.29438094,  266.10104436,  262.45212374,
        271.12445756,  303.03499561,  265.0191549 ,  272.77368071,
        270.16566548,  247.5708996 ,  279.92835265,  276.56102715]), weak=array([ 128.03345383,  125.45874598,  131.26309822,  129.12472693,
        131.11129123,  128.63905838,  131.74453539,  121.69914816,
        120.84306115,  120.37476698,  121.822487  ,  124.84940543,
        120.28938391,  129.15415752,  125.93530172,  123.81878975,
        130.30847876,  123.9646755 ,  123.26486608,  122.90076311,
        123.46646351,  122.87961001,  121.06376734,  121.9098591 ,
        120.98007957,  125.13910474,  129.34843414,  129.67101748,
        123.70569003,  128.6093204 ,  130.64682758,  126.08870123,
        125.46692922,  125.61494333,  124.73190595,  124.39541405,
        123.20295905,  125.96427481,  121.10350378,  118.22602972,
        122.0198267 ,  125.63358116,  119.65498572,  120.92454338,
        121.29752809,  118.74112248,  116.85857607,  120.87438953,
        133.35398091,  132.26782383,  146.37260849,  137.98280043,
        129.40112848,  127.10467414,  129.41850475,  129.78560081,
        129.87892029,  132.68905772,  129.78869958,  128.31836848,
        129.83937066,  127.24949354,  133.6841359 ,  130.2614328 ,
        126.248243  ,  124.21509409,  125.20504422,  126.663464  ,
        125.18538068,  125.79848709,  126.80256131,  129.2302534 ,
        124.09216948,  125.13802861,  125.51677657,  125.04419067,
        126.58680356,  130.42184144,  129.27070623,  128.6633746 ,
        117.79014244,  120.55357572,  118.89318366,  119.69964883,
        119.90977869,  118.79750264,  118.26713083,  116.64538833,
        120.49975891,  134.68222027,  117.78629107,  121.23274698,
        120.0736291 ,  110.03151093,  124.41260118,  122.91601207]))
2016-10-07 01:01:02  main:222                Processing chunk <Chunk (0/238692240), recording 0>...
2016-10-07 01:01:03  progressbar:97          0% complete, 0s elapsed. 43 spikes found.
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2016-10-07 01:01:33  progressbar:97          0% complete, 31s elapsed, 1h 37m 48s remaining. 913 spikes found.
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2016-10-07 01:02:03  progressbar:97          1% complete, 1m 1s elapsed, 1h 35m 39s remaining. 1353 spikes found.
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2016-10-07 01:13:09  progressbar:97          11% complete, 12m 7s elapsed, 1h 32m 53s remaining. 23489 spikes found.
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2016-10-07 01:13:40  progressbar:97          11% complete, 12m 37s elapsed, 1h 34m 14s remaining. 25724 spikes found.
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2016-10-07 01:14:10  progressbar:97          12% complete, 13m 8s elapsed, 1h 32m 58s remaining. 26186 spikes found.
2016-10-07 01:14:10  main:222                Processing chunk <Chunk (29550000/238692240), recording 0>...
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2016-10-07 01:37:20  progressbar:97          38% complete, 36m 17s elapsed, 57m 48s remaining. 44292 spikes found.
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2016-10-07 01:37:51  progressbar:97          38% complete, 36m 48s elapsed, 57m 41s remaining. 45311 spikes found.
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2016-10-07 01:38:21  progressbar:97          39% complete, 37m 19s elapsed, 57m 35s remaining. 46474 spikes found.
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2016-10-07 01:47:26  progressbar:97          49% complete, 46m 24s elapsed, 47m 24s remaining. 50968 spikes found.
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2016-10-07 01:47:56  progressbar:97          49% complete, 46m 54s elapsed, 47m 0s remaining. 51242 spikes found.
2016-10-07 01:47:56  main:222                Processing chunk <Chunk (119224400/238692240), recording 0>...
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2016-10-07 01:48:27  progressbar:97          50% complete, 47m 25s elapsed, 46m 46s remaining. 52027 spikes found.
2016-10-07 01:48:27  main:222                Processing chunk <Chunk (120170000/238692240), recording 0>...
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2016-10-07 01:48:57  progressbar:97          50% complete, 47m 55s elapsed, 46m 39s remaining. 53334 spikes found.
2016-10-07 01:48:57  main:222                Processing chunk <Chunk (120938300/238692240), recording 0>...
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2016-10-07 01:53:29  progressbar:97          55% complete, 52m 26s elapsed, 42m 23s remaining. 55870 spikes found.
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2016-10-07 01:53:59  progressbar:97          55% complete, 52m 57s elapsed, 42m 15s remaining. 56956 spikes found.
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2016-10-07 01:54:29  progressbar:97          56% complete, 53m 27s elapsed, 41m 34s remaining. 57391 spikes found.
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2016-10-07 02:09:10  progressbar:97          70% complete, 1h 8m 7s elapsed, 28m 39s remaining. 82724 spikes found.
2016-10-07 02:09:10  main:222                Processing chunk <Chunk (168021300/238692240), recording 0>...
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2016-10-07 02:09:42  progressbar:97          70% complete, 1h 8m 39s elapsed, 28m 39s remaining. 85128 spikes found.
2016-10-07 02:09:42  main:222                Processing chunk <Chunk (168415300/238692240), recording 0>...
2016-10-07 02:09:45  main:222                Processing chunk <Chunk (168435000/238692240), recording 0>...
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2016-10-07 02:10:13  progressbar:97          70% complete, 1h 9m 10s elapsed, 28m 26s remaining. 86536 spikes found.
2016-10-07 02:10:13  main:222                Processing chunk <Chunk (169144200/238692240), recording 0>...
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2016-10-07 02:10:43  progressbar:97          71% complete, 1h 9m 40s elapsed, 28m 26s remaining. 88839 spikes found.
2016-10-07 02:10:43  main:222                Processing chunk <Chunk (169498800/238692240), recording 0>...
2016-10-07 02:10:45  main:222                Processing chunk <Chunk (169518500/238692240), recording 0>...
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2016-10-07 02:11:14  progressbar:97          71% complete, 1h 10m 12s elapsed, 28m 21s remaining. 90748 spikes found.
2016-10-07 02:11:14  main:222                Processing chunk <Chunk (170030700/238692240), recording 0>...
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2016-10-07 02:11:45  progressbar:97          71% complete, 1h 10m 42s elapsed, 28m 18s remaining. 92989 spikes found.
2016-10-07 02:11:45  main:222                Processing chunk <Chunk (170464100/238692240), recording 0>...
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2016-10-07 02:12:16  progressbar:97          71% complete, 1h 11m 13s elapsed, 27m 52s remaining. 93881 spikes found.
2016-10-07 02:12:16  main:222                Processing chunk <Chunk (171547600/238692240), recording 0>...
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2016-10-07 02:12:46  progressbar:97          72% complete, 1h 11m 43s elapsed, 27m 52s remaining. 96855 spikes found.
2016-10-07 02:12:46  main:222                Processing chunk <Chunk (171902200/238692240), recording 0>...
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2016-10-07 02:13:16  progressbar:97          72% complete, 1h 12m 14s elapsed, 27m 44s remaining. 99074 spikes found.
2016-10-07 02:13:16  main:222                Processing chunk <Chunk (172453800/238692240), recording 0>...
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2016-10-07 02:13:47  progressbar:97          72% complete, 1h 12m 44s elapsed, 27m 25s remaining. 100500 spikes found.
2016-10-07 02:13:47  main:222                Processing chunk <Chunk (173340300/238692240), recording 0>...
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2016-10-07 02:14:17  progressbar:97          73% complete, 1h 13m 14s elapsed, 26m 57s remaining. 100909 spikes found.
2016-10-07 02:14:17  main:222                Processing chunk <Chunk (174482900/238692240), recording 0>...
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2016-10-07 02:14:47  progressbar:97          73% complete, 1h 13m 45s elapsed, 26m 47s remaining. 103111 spikes found.
2016-10-07 02:14:47  main:222                Processing chunk <Chunk (175093600/238692240), recording 0>...
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2016-10-07 02:18:19  progressbar:97          76% complete, 1h 17m 17s elapsed, 24m 22s remaining. 110124 spikes found.
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2016-10-07 02:18:52  progressbar:97          76% complete, 1h 17m 49s elapsed, 24m 7s remaining. 111798 spikes found.
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2016-10-07 02:19:22  progressbar:97          76% complete, 1h 18m 19s elapsed, 23m 44s remaining. 112538 spikes found.
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2016-10-07 02:19:52  progressbar:97          77% complete, 1h 18m 50s elapsed, 23m 24s remaining. 113697 spikes found.
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2016-10-07 02:21:24  progressbar:97          78% complete, 1h 20m 22s elapsed, 22m 22s remaining. 117031 spikes found.
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2016-10-07 02:22:57  progressbar:97          78% complete, 1h 21m 54s elapsed, 21m 58s remaining. 122968 spikes found.
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2016-10-07 02:23:28  progressbar:97          79% complete, 1h 22m 26s elapsed, 21m 31s remaining. 123544 spikes found.
2016-10-07 02:23:28  main:222                Processing chunk <Chunk (189277600/238692240), recording 0>...
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2016-10-07 02:23:59  progressbar:97          79% complete, 1h 22m 56s elapsed, 21m 22s remaining. 125887 spikes found.
2016-10-07 02:23:59  main:222                Processing chunk <Chunk (189770100/238692240), recording 0>...
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2016-10-07 02:24:29  progressbar:97          79% complete, 1h 23m 26s elapsed, 21m 6s remaining. 127094 spikes found.
2016-10-07 02:24:29  main:222                Processing chunk <Chunk (190518700/238692240), recording 0>...
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2016-10-07 02:24:59  progressbar:97          80% complete, 1h 23m 56s elapsed, 20m 32s remaining. 127174 spikes found.
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2016-10-07 02:25:29  progressbar:97          80% complete, 1h 24m 27s elapsed, 20m 1s remaining. 127498 spikes found.
2016-10-07 02:25:29  main:222                Processing chunk <Chunk (192941800/238692240), recording 0>...
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2016-10-07 02:28:00  progressbar:97          83% complete, 1h 26m 58s elapsed, 17m 33s remaining. 130113 spikes found.
2016-10-07 02:28:00  main:222                Processing chunk <Chunk (198615400/238692240), recording 0>...
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2016-10-07 02:28:31  progressbar:97          83% complete, 1h 27m 29s elapsed, 17m 8s remaining. 131351 spikes found.
2016-10-07 02:28:31  main:222                Processing chunk <Chunk (199580700/238692240), recording 0>...
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2016-10-07 02:29:03  progressbar:97          83% complete, 1h 28m 0s elapsed, 16m 48s remaining. 133093 spikes found.
2016-10-07 02:29:03  main:222                Processing chunk <Chunk (200408100/238692240), recording 0>...
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2016-10-07 02:29:33  progressbar:97          84% complete, 1h 28m 30s elapsed, 16m 38s remaining. 135654 spikes found.
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2016-10-07 02:30:03  progressbar:97          84% complete, 1h 29m 1s elapsed, 16m 29s remaining. 138265 spikes found.
2016-10-07 02:30:03  main:222                Processing chunk <Chunk (201373400/238692240), recording 0>...
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2016-10-07 02:30:35  progressbar:97          84% complete, 1h 29m 33s elapsed, 16m 19s remaining. 141011 spikes found.
2016-10-07 02:30:35  main:222                Processing chunk <Chunk (201885600/238692240), recording 0>...
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2016-10-07 02:31:06  progressbar:97          84% complete, 1h 30m 4s elapsed, 16m 7s remaining. 143206 spikes found.
2016-10-07 02:31:06  main:222                Processing chunk <Chunk (202456900/238692240), recording 0>...
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2016-10-07 02:33:09  progressbar:97          86% complete, 1h 32m 7s elapsed, 14m 43s remaining. 155518 spikes found.
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2016-10-07 02:39:12  progressbar:97          92% complete, 1h 38m 9s elapsed, 8m 1s remaining. 178296 spikes found.
2016-10-07 02:39:12  main:222                Processing chunk <Chunk (220659700/238692240), recording 0>...
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2016-10-07 02:39:42  progressbar:97          92% complete, 1h 38m 40s elapsed, 7m 51s remaining. 181949 spikes found.
2016-10-07 02:39:42  main:222                Processing chunk <Chunk (221093100/238692240), recording 0>...
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2016-10-07 02:40:13  progressbar:97          92% complete, 1h 39m 11s elapsed, 7m 39s remaining. 185726 spikes found.
2016-10-07 02:40:13  main:222                Processing chunk <Chunk (221585600/238692240), recording 0>...
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2016-10-07 02:40:44  progressbar:97          93% complete, 1h 39m 41s elapsed, 7m 28s remaining. 189116 spikes found.
2016-10-07 02:40:44  main:222                Processing chunk <Chunk (222058400/238692240), recording 0>...
2016-10-07 02:40:45  main:222                Processing chunk <Chunk (222078100/238692240), recording 0>...
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2016-10-07 02:41:15  progressbar:97          93% complete, 1h 40m 13s elapsed, 7m 15s remaining. 192757 spikes found.
2016-10-07 02:41:15  main:222                Processing chunk <Chunk (222570600/238692240), recording 0>...
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2016-10-07 02:41:45  progressbar:97          93% complete, 1h 40m 43s elapsed, 7m 3s remaining. 196195 spikes found.
2016-10-07 02:41:45  main:222                Processing chunk <Chunk (223063100/238692240), recording 0>...
2016-10-07 02:41:47  main:222                Processing chunk <Chunk (223082800/238692240), recording 0>...
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2016-10-07 02:42:16  progressbar:97          93% complete, 1h 41m 13s elapsed, 6m 50s remaining. 199594 spikes found.
2016-10-07 02:42:16  main:222                Processing chunk <Chunk (223575300/238692240), recording 0>...
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2016-10-07 02:42:47  progressbar:97          93% complete, 1h 41m 44s elapsed, 6m 37s remaining. 202993 spikes found.
2016-10-07 02:42:47  main:222                Processing chunk <Chunk (224107200/238692240), recording 0>...
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2016-10-07 02:43:17  progressbar:97          94% complete, 1h 42m 15s elapsed, 6m 23s remaining. 206373 spikes found.
2016-10-07 02:43:17  main:222                Processing chunk <Chunk (224658800/238692240), recording 0>...
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2016-10-07 02:43:48  progressbar:97          94% complete, 1h 42m 45s elapsed, 6m 10s remaining. 209745 spikes found.
2016-10-07 02:43:48  main:222                Processing chunk <Chunk (225171000/238692240), recording 0>...
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2016-10-07 02:44:19  progressbar:97          94% complete, 1h 43m 16s elapsed, 5m 56s remaining. 213133 spikes found.
2016-10-07 02:44:19  main:222                Processing chunk <Chunk (225702900/238692240), recording 0>...
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2016-10-07 02:44:49  progressbar:97          94% complete, 1h 43m 47s elapsed, 5m 41s remaining. 216592 spikes found.
2016-10-07 02:44:49  main:222                Processing chunk <Chunk (226274200/238692240), recording 0>...
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2016-10-07 02:45:20  progressbar:97          95% complete, 1h 44m 18s elapsed, 5m 27s remaining. 220008 spikes found.
2016-10-07 02:45:20  main:222                Processing chunk <Chunk (226806100/238692240), recording 0>...
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2016-10-07 02:45:51  progressbar:97          95% complete, 1h 44m 48s elapsed, 5m 14s remaining. 223425 spikes found.
2016-10-07 02:45:51  main:222                Processing chunk <Chunk (227338000/238692240), recording 0>...
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2016-10-07 02:46:21  progressbar:97          95% complete, 1h 45m 19s elapsed, 5m 0s remaining. 226751 spikes found.
2016-10-07 02:46:21  main:222                Processing chunk <Chunk (227869900/238692240), recording 0>...
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2016-10-07 02:46:52  progressbar:97          95% complete, 1h 45m 50s elapsed, 4m 44s remaining. 229987 spikes found.
2016-10-07 02:46:52  main:222                Processing chunk <Chunk (228441200/238692240), recording 0>...
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2016-10-07 02:47:22  progressbar:97          95% complete, 1h 46m 20s elapsed, 4m 30s remaining. 233359 spikes found.
2016-10-07 02:47:22  main:222                Processing chunk <Chunk (228992800/238692240), recording 0>...
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2016-10-07 02:47:53  progressbar:97          96% complete, 1h 46m 50s elapsed, 4m 14s remaining. 236432 spikes found.
2016-10-07 02:47:53  main:222                Processing chunk <Chunk (229564100/238692240), recording 0>...
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2016-10-07 02:48:23  progressbar:97          96% complete, 1h 47m 21s elapsed, 3m 59s remaining. 239649 spikes found.
2016-10-07 02:48:23  main:222                Processing chunk <Chunk (230135400/238692240), recording 0>...
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2016-10-07 02:48:54  progressbar:97          96% complete, 1h 47m 51s elapsed, 3m 43s remaining. 242820 spikes found.
2016-10-07 02:48:54  main:222                Processing chunk <Chunk (230706700/238692240), recording 0>...
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2016-10-07 02:49:25  progressbar:97          96% complete, 1h 48m 22s elapsed, 3m 29s remaining. 246054 spikes found.
2016-10-07 02:49:25  main:222                Processing chunk <Chunk (231258300/238692240), recording 0>...
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2016-10-07 02:49:55  progressbar:97          97% complete, 1h 48m 53s elapsed, 3m 13s remaining. 249392 spikes found.
2016-10-07 02:49:55  main:222                Processing chunk <Chunk (231809900/238692240), recording 0>...
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2016-10-07 02:50:26  progressbar:97          97% complete, 1h 49m 24s elapsed, 2m 58s remaining. 252450 spikes found.
2016-10-07 02:50:26  main:222                Processing chunk <Chunk (232361500/238692240), recording 0>...
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2016-10-07 02:50:56  progressbar:97          97% complete, 1h 49m 54s elapsed, 2m 43s remaining. 255403 spikes found.
2016-10-07 02:50:56  main:222                Processing chunk <Chunk (232913100/238692240), recording 0>...
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2016-10-07 02:51:27  progressbar:97          97% complete, 1h 50m 24s elapsed, 2m 23s remaining. 258240 spikes found.
2016-10-07 02:51:27  main:222                Processing chunk <Chunk (233622300/238692240), recording 0>...
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2016-10-07 02:53:15  progressbar:97          100% complete, 1h 52m 13s elapsed, 0s remaining. 260615 spikes found.