2016-10-09 20:19:23  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /zpool/tingley/DT5/20161009_864um_1008um_161009_111927/20161009_864um_1008um_161009_111927.dat>
2016-10-09 20:19:23  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/zpool/tingley/DT5/20161009_864um_1008um_161009_111927/1/20161009_864um_1008um_161009_111927_sh1',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 500.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '1.prb',
 'raw_data_files': ['/zpool/tingley/DT5/20161009_864um_1008um_161009_111927/20161009_864um_1008um_161009_111927.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2016-10-09 20:20:48  main:200                Threshold: DoubleThreshold(strong=array([ 299.58542115,  292.62005522,  292.17766055,  276.93544983,
        290.0298936 ,  290.33725558,  289.42176799,  268.8766519 ,
        281.50181296,  273.01450801,  271.12616025,  281.38355832,
        276.88222539,  290.86016958,  282.06039271,  292.13896874,
        300.67049087,  296.58949453,  291.75353496,  282.01428767,
        294.10091599,  284.71248564,  272.18480011,  286.91906838,
        281.42105554,  294.76467218,  300.56443449,  300.24295233,
        285.35649283,  301.67662727,  298.34663676,  299.5934901 ,
        264.01854889,  266.13107374,  269.690087  ,  243.34446242,
        256.15464547,  259.24915092,  264.12565302,  238.48100344,
        267.85377204,  259.62268963,  243.91890181,  230.5162593 ,
        238.1637811 ,  240.08087156,  230.91216776,  251.30371965,
        290.01877503,  288.64782392,  291.6825434 ,  287.19373477,
        293.25993789,  297.92951955,  279.46533231,  287.64507633,
        284.56122881,  287.11071554,  283.08548072,  282.9403589 ,
        282.49474104,  272.686629  ,  288.87270903,  288.53478112,
        254.13430562,  260.27717986,  261.77095878,  257.79834016,
        277.58775056,  273.67131135,  277.89662597,  279.26003835,
        271.40210178,  272.54880757,  286.64266972,  284.27622371,
        273.17806437,  272.99697096,  272.27698592,  282.57360174,
        232.45231671,  251.22363773,  237.49457729,  241.0014299 ,
        251.10569838,  227.69408598,  245.26021559,  242.36916799,
        242.04830489,  229.32836398,  244.19253631,  237.44315399,
        239.3244782 ,  237.92937179,  247.59785104,  243.65138328]), weak=array([ 133.14907607,  130.05335787,  129.85673802,  123.08242215,
        128.90217493,  129.03878026,  128.63189689,  119.50073418,
        125.11191687,  121.33978134,  120.50051567,  125.05935925,
        123.05876684,  129.27118648,  125.36017454,  129.83954166,
        133.63132928,  131.81755312,  129.66823776,  125.33968341,
        130.71151822,  126.53888251,  120.97102227,  127.51958594,
        125.07602468,  131.00652097,  133.5841931 ,  133.44131215,
        126.82510792,  134.07850101,  132.59850523,  133.15266227,
        117.34157728,  118.28047722,  119.86226089,  108.15309441,
        113.8465091 ,  115.22184485,  117.38917912,  105.99155709,
        119.04612091,  115.38786206,  108.4084008 ,  102.4516708 ,
        105.85056938,  106.70260958,  102.62763011,  111.69054206,
        128.89723335,  128.28792174,  129.63668595,  127.6416599 ,
        130.33775017,  132.4131198 ,  124.20681436,  127.84225615,
        126.47165725,  127.60476246,  125.81576921,  125.75127062,
        125.55321824,  121.19405734,  128.38787068,  128.2376805 ,
        112.94858027,  115.67874661,  116.34264834,  114.57704007,
        123.37233358,  121.63169393,  123.50961154,  124.1155726 ,
        120.62315635,  121.13280336,  127.3967421 ,  126.34498832,
        121.41247305,  121.3319871 ,  121.01199374,  125.58826744,
        103.31214076,  111.6549501 ,  105.55314546,  107.11174662,
        111.60253261,  101.19737155,  109.00454026,  107.71963022,
        107.5770244 ,  101.92371732,  108.53001614,  105.53029066,
        106.36643475,  105.74638746,  110.04348935,  108.28950368]))
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2016-10-09 20:32:25  progressbar:97          20% complete, 11m 36s elapsed, 44m 51s remaining. 12134 spikes found.
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2016-10-09 20:45:09  progressbar:97          39% complete, 24m 20s elapsed, 37m 52s remaining. 23868 spikes found.
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2016-10-09 20:50:44  progressbar:97          46% complete, 29m 55s elapsed, 35m 3s remaining. 28162 spikes found.
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2016-10-09 20:51:14  progressbar:97          46% complete, 30m 25s elapsed, 35m 7s remaining. 28757 spikes found.
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2016-10-09 20:51:45  progressbar:97          46% complete, 30m 56s elapsed, 35m 15s remaining. 28998 spikes found.
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2016-10-09 20:52:24  progressbar:97          47% complete, 31m 35s elapsed, 35m 34s remaining. 29084 spikes found.
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2016-10-09 20:52:56  progressbar:97          47% complete, 32m 8s elapsed, 35m 45s remaining. 29160 spikes found.
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2016-10-09 20:53:28  progressbar:97          47% complete, 32m 40s elapsed, 35m 58s remaining. 29354 spikes found.
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2016-10-09 20:53:59  progressbar:97          47% complete, 33m 11s elapsed, 36m 5s remaining. 29763 spikes found.
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2016-10-09 21:03:08  progressbar:97          61% complete, 42m 19s elapsed, 26m 54s remaining. 41694 spikes found.
2016-10-09 21:03:08  main:222                Processing chunk <Chunk (99879000/163402560), recording 0>...
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2016-10-09 21:03:38  progressbar:97          61% complete, 42m 49s elapsed, 26m 58s remaining. 44296 spikes found.
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2016-10-09 21:04:08  progressbar:97          61% complete, 43m 19s elapsed, 26m 51s remaining. 47046 spikes found.
2016-10-09 21:04:08  main:222                Processing chunk <Chunk (100864000/163402560), recording 0>...
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2016-10-09 21:04:39  progressbar:97          62% complete, 43m 50s elapsed, 26m 47s remaining. 49499 spikes found.
2016-10-09 21:04:39  main:222                Processing chunk <Chunk (101435300/163402560), recording 0>...
2016-10-09 21:04:41  main:222                Processing chunk <Chunk (101455000/163402560), recording 0>...
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2016-10-09 21:05:10  progressbar:97          62% complete, 44m 21s elapsed, 26m 46s remaining. 52635 spikes found.
2016-10-09 21:05:10  main:222                Processing chunk <Chunk (101908100/163402560), recording 0>...
2016-10-09 21:05:11  main:222                Processing chunk <Chunk (101927800/163402560), recording 0>...
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2016-10-09 21:05:39  main:222                Processing chunk <Chunk (102380900/163402560), recording 0>...
2016-10-09 21:05:41  progressbar:97          62% complete, 44m 52s elapsed, 26m 43s remaining. 55542 spikes found.
2016-10-09 21:05:41  main:222                Processing chunk <Chunk (102400600/163402560), recording 0>...
2016-10-09 21:05:43  main:222                Processing chunk <Chunk (102420300/163402560), recording 0>...
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2016-10-09 21:06:10  main:222                Processing chunk <Chunk (102814300/163402560), recording 0>...
2016-10-09 21:06:11  progressbar:97          62% complete, 45m 22s elapsed, 26m 43s remaining. 58140 spikes found.
2016-10-09 21:06:11  main:222                Processing chunk <Chunk (102834000/163402560), recording 0>...
2016-10-09 21:06:12  main:222                Processing chunk <Chunk (102853700/163402560), recording 0>...
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2016-10-09 21:06:40  main:222                Processing chunk <Chunk (103247700/163402560), recording 0>...
2016-10-09 21:06:41  progressbar:97          63% complete, 45m 53s elapsed, 26m 43s remaining. 60628 spikes found.
2016-10-09 21:06:41  main:222                Processing chunk <Chunk (103267400/163402560), recording 0>...
2016-10-09 21:06:43  main:222                Processing chunk <Chunk (103287100/163402560), recording 0>...
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2016-10-09 21:07:09  main:222                Processing chunk <Chunk (103720500/163402560), recording 0>...
2016-10-09 21:07:12  progressbar:97          63% complete, 46m 23s elapsed, 26m 40s remaining. 63504 spikes found.
2016-10-09 21:07:12  main:222                Processing chunk <Chunk (103740200/163402560), recording 0>...
2016-10-09 21:07:14  main:222                Processing chunk <Chunk (103759900/163402560), recording 0>...
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2016-10-09 21:07:41  main:222                Processing chunk <Chunk (104193300/163402560), recording 0>...
2016-10-09 21:07:42  progressbar:97          63% complete, 46m 54s elapsed, 26m 38s remaining. 66230 spikes found.
2016-10-09 21:07:42  main:222                Processing chunk <Chunk (104213000/163402560), recording 0>...
2016-10-09 21:07:44  main:222                Processing chunk <Chunk (104232700/163402560), recording 0>...
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2016-10-09 21:08:13  progressbar:97          64% complete, 47m 24s elapsed, 26m 26s remaining. 68451 spikes found.
2016-10-09 21:08:13  main:222                Processing chunk <Chunk (104902500/163402560), recording 0>...
2016-10-09 21:08:13  main:222                Processing chunk <Chunk (104922200/163402560), recording 0>...
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2016-10-09 21:08:25  main:222                Processing chunk <Chunk (105119200/163402560), recording 0>...
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2016-10-09 21:08:44  progressbar:97          64% complete, 47m 56s elapsed, 26m 23s remaining. 71158 spikes found.
2016-10-09 21:08:44  main:222                Processing chunk <Chunk (105375300/163402560), recording 0>...
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2016-10-09 21:09:14  progressbar:97          64% complete, 48m 26s elapsed, 26m 21s remaining. 74470 spikes found.
2016-10-09 21:09:14  main:222                Processing chunk <Chunk (105808700/163402560), recording 0>...
2016-10-09 21:09:17  main:222                Processing chunk <Chunk (105828400/163402560), recording 0>...
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2016-10-09 21:09:39  main:222                Processing chunk <Chunk (106163300/163402560), recording 0>...
2016-10-09 21:09:46  progressbar:97          64% complete, 48m 57s elapsed, 26m 23s remaining. 76878 spikes found.
2016-10-09 21:09:46  main:222                Processing chunk <Chunk (106183000/163402560), recording 0>...
2016-10-09 21:09:47  main:222                Processing chunk <Chunk (106202700/163402560), recording 0>...
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2016-10-09 21:10:15  main:222                Processing chunk <Chunk (106675500/163402560), recording 0>...
2016-10-09 21:10:16  progressbar:97          65% complete, 49m 28s elapsed, 26m 17s remaining. 79706 spikes found.
2016-10-09 21:10:16  main:222                Processing chunk <Chunk (106695200/163402560), recording 0>...
2016-10-09 21:10:18  main:222                Processing chunk <Chunk (106714900/163402560), recording 0>...
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2016-10-09 21:10:39  main:222                Processing chunk <Chunk (107069500/163402560), recording 0>...
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2016-10-09 21:10:46  main:222                Processing chunk <Chunk (107207400/163402560), recording 0>...
2016-10-09 21:10:47  progressbar:97          65% complete, 49m 59s elapsed, 26m 11s remaining. 82416 spikes found.
2016-10-09 21:10:47  main:222                Processing chunk <Chunk (107227100/163402560), recording 0>...
2016-10-09 21:10:49  main:222                Processing chunk <Chunk (107246800/163402560), recording 0>...
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2016-10-09 21:11:15  main:222                Processing chunk <Chunk (107522600/163402560), recording 0>...
2016-10-09 21:11:17  progressbar:97          65% complete, 50m 29s elapsed, 26m 13s remaining. 84637 spikes found.
2016-10-09 21:11:17  main:222                Processing chunk <Chunk (107542300/163402560), recording 0>...
2016-10-09 21:11:21  main:222                Processing chunk <Chunk (107562000/163402560), recording 0>...
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2016-10-09 21:11:47  main:222                Processing chunk <Chunk (108015100/163402560), recording 0>...
2016-10-09 21:11:49  progressbar:97          66% complete, 51m 0s elapsed, 26m 8s remaining. 87374 spikes found.
2016-10-09 21:11:49  main:222                Processing chunk <Chunk (108034800/163402560), recording 0>...
2016-10-09 21:11:53  main:222                Processing chunk <Chunk (108054500/163402560), recording 0>...
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2016-10-09 21:12:19  main:222                Processing chunk <Chunk (108566700/163402560), recording 0>...
2016-10-09 21:12:19  progressbar:97          66% complete, 51m 31s elapsed, 26m 0s remaining. 90141 spikes found.
2016-10-09 21:12:19  main:222                Processing chunk <Chunk (108586400/163402560), recording 0>...
2016-10-09 21:12:20  main:222                Processing chunk <Chunk (108606100/163402560), recording 0>...
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2016-10-09 21:12:29  main:222                Processing chunk <Chunk (108862200/163402560), recording 0>...
2016-10-09 21:12:29  main:222                Processing chunk <Chunk (108881900/163402560), recording 0>...
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2016-10-09 21:12:51  progressbar:97          66% complete, 52m 2s elapsed, 25m 43s remaining. 91727 spikes found.
2016-10-09 21:12:51  main:222                Processing chunk <Chunk (109354700/163402560), recording 0>...
2016-10-09 21:12:53  main:222                Processing chunk <Chunk (109374400/163402560), recording 0>...
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2016-10-09 21:13:21  progressbar:97          67% complete, 52m 32s elapsed, 25m 35s remaining. 94577 spikes found.
2016-10-09 21:13:21  main:222                Processing chunk <Chunk (109886600/163402560), recording 0>...
2016-10-09 21:13:24  main:222                Processing chunk <Chunk (109906300/163402560), recording 0>...
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2016-10-09 21:13:50  main:222                Processing chunk <Chunk (110477600/163402560), recording 0>...
2016-10-09 21:13:51  progressbar:97          67% complete, 53m 2s elapsed, 25m 23s remaining. 97413 spikes found.
2016-10-09 21:13:51  main:222                Processing chunk <Chunk (110497300/163402560), recording 0>...
2016-10-09 21:13:52  main:222                Processing chunk <Chunk (110517000/163402560), recording 0>...
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2016-10-09 21:14:36  progressbar:97          67% complete, 53m 47s elapsed, 25m 23s remaining. 99761 spikes found.
2016-10-09 21:14:36  main:222                Processing chunk <Chunk (111009500/163402560), recording 0>...
2016-10-09 21:14:37  main:222                Processing chunk <Chunk (111029200/163402560), recording 0>...
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2016-10-09 21:15:06  progressbar:97          68% complete, 54m 17s elapsed, 25m 19s remaining. 101939 spikes found.
2016-10-09 21:15:06  main:222                Processing chunk <Chunk (111423200/163402560), recording 0>...
2016-10-09 21:15:07  main:222                Processing chunk <Chunk (111442900/163402560), recording 0>...
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2016-10-09 21:15:36  progressbar:97          68% complete, 54m 47s elapsed, 25m 15s remaining. 104347 spikes found.
2016-10-09 21:15:36  main:222                Processing chunk <Chunk (111856600/163402560), recording 0>...
2016-10-09 21:15:37  main:222                Processing chunk <Chunk (111876300/163402560), recording 0>...
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2016-10-09 21:16:07  progressbar:97          68% complete, 55m 18s elapsed, 25m 13s remaining. 106538 spikes found.
2016-10-09 21:16:07  main:222                Processing chunk <Chunk (112211200/163402560), recording 0>...
2016-10-09 21:16:07  main:222                Processing chunk <Chunk (112230900/163402560), recording 0>...
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2016-10-09 21:16:36  main:222                Processing chunk <Chunk (112743100/163402560), recording 0>...
2016-10-09 21:16:37  progressbar:97          69% complete, 55m 48s elapsed, 25m 3s remaining. 109072 spikes found.
2016-10-09 21:16:37  main:222                Processing chunk <Chunk (112762800/163402560), recording 0>...
2016-10-09 21:16:38  main:222                Processing chunk <Chunk (112782500/163402560), recording 0>...
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2016-10-09 21:17:07  main:222                Processing chunk <Chunk (113294700/163402560), recording 0>...
2016-10-09 21:17:09  progressbar:97          69% complete, 56m 20s elapsed, 24m 54s remaining. 111840 spikes found.
2016-10-09 21:17:09  main:222                Processing chunk <Chunk (113314400/163402560), recording 0>...
2016-10-09 21:17:12  main:222                Processing chunk <Chunk (113334100/163402560), recording 0>...
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2016-10-09 21:17:39  progressbar:97          69% complete, 56m 50s elapsed, 24m 47s remaining. 114286 spikes found.
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2016-10-09 21:18:09  progressbar:97          69% complete, 57m 21s elapsed, 24m 39s remaining. 116654 spikes found.
2016-10-09 21:18:09  main:222                Processing chunk <Chunk (114279700/163402560), recording 0>...
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2016-10-09 21:18:40  progressbar:97          70% complete, 57m 52s elapsed, 24m 26s remaining. 119846 spikes found.
2016-10-09 21:18:40  main:222                Processing chunk <Chunk (114890400/163402560), recording 0>...
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2016-10-09 21:19:11  progressbar:97          70% complete, 58m 22s elapsed, 24m 5s remaining. 122211 spikes found.
2016-10-09 21:19:11  main:222                Processing chunk <Chunk (115658700/163402560), recording 0>...
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2016-10-09 21:19:42  progressbar:97          71% complete, 58m 53s elapsed, 23m 31s remaining. 122677 spikes found.
2016-10-09 21:19:42  main:222                Processing chunk <Chunk (116761900/163402560), recording 0>...
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2016-10-09 21:20:13  progressbar:97          71% complete, 59m 25s elapsed, 23m 18s remaining. 126113 spikes found.
2016-10-09 21:20:13  main:222                Processing chunk <Chunk (117352900/163402560), recording 0>...
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2016-10-09 21:20:44  progressbar:97          72% complete, 59m 55s elapsed, 23m 1s remaining. 128632 spikes found.
2016-10-09 21:20:44  main:222                Processing chunk <Chunk (118042400/163402560), recording 0>...
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2016-10-09 21:21:14  progressbar:97          72% complete, 1h 0m 25s elapsed, 22m 53s remaining. 132041 spikes found.
2016-10-09 21:21:14  main:222                Processing chunk <Chunk (118515200/163402560), recording 0>...
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2016-10-09 21:21:44  progressbar:97          72% complete, 1h 0m 55s elapsed, 22m 39s remaining. 134894 spikes found.
2016-10-09 21:21:44  main:222                Processing chunk <Chunk (119106200/163402560), recording 0>...
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2016-10-09 21:22:14  progressbar:97          73% complete, 1h 1m 26s elapsed, 22m 32s remaining. 137857 spikes found.
2016-10-09 21:22:14  main:222                Processing chunk <Chunk (119539600/163402560), recording 0>...
2016-10-09 21:22:15  main:222                Processing chunk <Chunk (119559300/163402560), recording 0>...
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2016-10-09 21:22:45  progressbar:97          73% complete, 1h 1m 56s elapsed, 22m 20s remaining. 140849 spikes found.
2016-10-09 21:22:45  main:222                Processing chunk <Chunk (120091200/163402560), recording 0>...
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2016-10-09 21:23:15  progressbar:97          73% complete, 1h 2m 26s elapsed, 22m 4s remaining. 143984 spikes found.
2016-10-09 21:23:15  main:222                Processing chunk <Chunk (120721600/163402560), recording 0>...
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2016-10-09 21:23:47  progressbar:97          74% complete, 1h 2m 58s elapsed, 21m 53s remaining. 146879 spikes found.
2016-10-09 21:23:47  main:222                Processing chunk <Chunk (121253500/163402560), recording 0>...
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2016-10-09 21:24:17  progressbar:97          74% complete, 1h 3m 28s elapsed, 21m 38s remaining. 149721 spikes found.
2016-10-09 21:24:17  main:222                Processing chunk <Chunk (121844500/163402560), recording 0>...
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2016-10-09 21:25:50  progressbar:97          75% complete, 1h 5m 1s elapsed, 20m 56s remaining. 157799 spikes found.
2016-10-09 21:25:50  main:222                Processing chunk <Chunk (123597800/163402560), recording 0>...
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2016-10-09 21:26:20  progressbar:97          76% complete, 1h 5m 31s elapsed, 20m 22s remaining. 159247 spikes found.
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2016-10-09 21:26:50  progressbar:97          76% complete, 1h 6m 1s elapsed, 20m 3s remaining. 161718 spikes found.
2016-10-09 21:26:50  main:222                Processing chunk <Chunk (125331400/163402560), recording 0>...
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2016-10-09 21:27:20  progressbar:97          77% complete, 1h 6m 31s elapsed, 19m 48s remaining. 164787 spikes found.
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2016-10-09 21:27:50  progressbar:97          77% complete, 1h 7m 2s elapsed, 19m 32s remaining. 167443 spikes found.
2016-10-09 21:27:50  main:222                Processing chunk <Chunk (126513400/163402560), recording 0>...
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2016-10-09 21:28:22  progressbar:97          77% complete, 1h 7m 33s elapsed, 19m 18s remaining. 170404 spikes found.
2016-10-09 21:28:22  main:222                Processing chunk <Chunk (127084700/163402560), recording 0>...
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2016-10-09 21:28:53  progressbar:97          78% complete, 1h 8m 4s elapsed, 19m 4s remaining. 172979 spikes found.
2016-10-09 21:28:53  main:222                Processing chunk <Chunk (127636300/163402560), recording 0>...
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2016-10-09 21:29:24  progressbar:97          78% complete, 1h 8m 35s elapsed, 18m 50s remaining. 175219 spikes found.
2016-10-09 21:29:24  main:222                Processing chunk <Chunk (128187900/163402560), recording 0>...
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2016-10-09 21:29:54  progressbar:97          78% complete, 1h 9m 6s elapsed, 18m 33s remaining. 178083 spikes found.
2016-10-09 21:29:54  main:222                Processing chunk <Chunk (128818300/163402560), recording 0>...
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2016-10-09 21:30:25  progressbar:97          79% complete, 1h 9m 36s elapsed, 18m 18s remaining. 180806 spikes found.
2016-10-09 21:30:25  main:222                Processing chunk <Chunk (129369900/163402560), recording 0>...
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2016-10-09 21:30:56  progressbar:97          79% complete, 1h 10m 7s elapsed, 17m 59s remaining. 183735 spikes found.
2016-10-09 21:30:56  main:222                Processing chunk <Chunk (130039700/163402560), recording 0>...
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2016-10-09 21:31:26  progressbar:97          79% complete, 1h 10m 37s elapsed, 17m 41s remaining. 186670 spikes found.
2016-10-09 21:31:26  main:222                Processing chunk <Chunk (130670100/163402560), recording 0>...
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2016-10-09 21:34:58  progressbar:97          84% complete, 1h 14m 9s elapsed, 13m 45s remaining. 194914 spikes found.
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2016-10-09 21:35:28  progressbar:97          85% complete, 1h 14m 40s elapsed, 13m 4s remaining. 195239 spikes found.
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2016-10-09 21:46:22  progressbar:97          100% complete, 1h 25m 34s elapsed, 0s remaining. 204668 spikes found.