2016-10-16 14:54:42  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /zpool/tingley/DT5/20161016_1368um_1476um_merge/20161016_1368um_1476um_merge.dat>
2016-10-16 14:54:42  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/zpool/tingley/DT5/20161016_1368um_1476um_merge/4/20161016_1368um_1476um_merge_sh4',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 500.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '4.prb',
 'raw_data_files': ['/zpool/tingley/DT5/20161016_1368um_1476um_merge/20161016_1368um_1476um_merge.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2016-10-16 14:55:57  main:200                Threshold: DoubleThreshold(strong=array([ 326.34323899,  324.44558139,  323.38428519,  301.63855531,
        326.87401684,  325.87961074,  316.58614053,  287.31242424,
        301.70327311,  299.15507695,  301.81250105,  309.68866316,
        306.51799314,  312.68019306,  310.35502726,  305.11199524,
        311.2168193 ,  323.06935637,  315.31805322,  302.33003849,
        310.70955764,  306.9470832 ,  304.77691873,  313.12439524,
        304.26986856,  307.2858512 ,  318.93131253,  323.98802273,
        314.66239716,  322.05635435,  316.79880601,  317.13789561,
        235.39715035,  226.5137843 ,  225.63041338,  284.76111294,
        230.00184318,  232.05548943,  232.34087034,  235.78076733,
        233.26791659,  231.91487762,  238.57092204,  228.25809709,
        238.41502261,  243.75812041,  237.91142034,  238.44288264,
        312.88563789,  300.15928435,  351.42725427,  324.7973166 ,
        287.68214688,  289.77240205,  296.87137304,  294.42280455,
        321.55062687,  347.82585626,  289.48853135,  299.93675095,
        269.56396004,  255.96891183,  240.10616591,  264.94273839,
        278.73692131,  290.60125355,  290.10718935,  283.08765643,
        262.28301865,  260.88804525,  263.16626954,  259.10994435,
        264.08772378,  262.4284301 ,  263.08464003,  269.49091394,
        259.36240552,  267.42812478,  264.44779619,  275.42376172,
        235.3439456 ,  260.019575  ,  238.76969526,  244.0699676 ,
        237.98844265,  258.62996889,  275.55629903,  268.88261534,
        275.97187565,  269.78364986,  263.76090881,  269.93020519,
        257.15531854,  238.59979872,  269.79125185,  261.08641822]), weak=array([ 145.04143955,  144.19803617,  143.72634897,  134.06158014,
        145.27734082,  144.83538255,  140.70495134,  127.69441077,
        134.09034361,  132.95781198,  134.13888935,  137.63940585,
        136.23021917,  138.9689747 ,  137.93556767,  135.60533122,
        138.31858636,  143.58638061,  140.14135699,  134.368906  ,
        138.09313673,  136.42092587,  135.45640832,  139.16639788,
        135.23105269,  136.57148942,  141.74725001,  143.99467677,
        139.84995429,  143.13615749,  140.79946934,  140.95017583,
        104.62095571,  100.67279302,  100.28018372,  126.56049464,
        102.22304141,  103.13577308,  103.26260904,  104.79145215,
        103.6746296 ,  103.07327894,  106.03152091,  101.44804315,
        105.96223227,  108.3369424 ,  105.73840904,  105.97461451,
        139.06028351,  133.40412638,  156.18989079,  144.35436293,
        127.85873195,  128.78773425,  131.94283246,  130.8545798 ,
        142.91138972,  154.58926945,  128.66156949,  133.30522265,
        119.80620446,  113.76396081,  106.71385152,  117.75232817,
        123.88307614,  129.15611269,  128.9365286 ,  125.81673619,
        116.57023051,  115.95024233,  116.96278646,  115.15997527,
        117.37232168,  116.63485782,  116.92650668,  119.77373953,
        115.27218023,  118.85694435,  117.53235386,  122.41056076,
        104.59730916,  115.56425556,  106.11986456,  108.47554116,
        105.77264118,  114.94665284,  122.46946624,  119.5033846 ,
        122.65416696,  119.90384438,  117.22707058,  119.96898008,
        114.29125268,  106.04435499,  119.90722304,  116.0384081 ]))
2016-10-16 14:55:57  main:222                Processing chunk <Chunk (0/63745920), recording 0>...
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2016-10-16 14:57:59  progressbar:97          7% complete, 2m 1s elapsed, 23m 54s remaining. 20483 spikes found.
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2016-10-16 14:59:00  progressbar:97          11% complete, 3m 2s elapsed, 23m 28s remaining. 28427 spikes found.
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2016-10-16 15:01:35  progressbar:97          21% complete, 5m 37s elapsed, 20m 46s remaining. 49424 spikes found.
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2016-10-16 15:02:06  progressbar:97          23% complete, 6m 8s elapsed, 20m 21s remaining. 53035 spikes found.
2016-10-16 15:02:06  main:222                Processing chunk <Chunk (14775000/63745920), recording 0>...
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2016-10-16 15:02:37  progressbar:97          24% complete, 6m 38s elapsed, 20m 9s remaining. 56598 spikes found.
2016-10-16 15:02:37  main:222                Processing chunk <Chunk (15799400/63745920), recording 0>...
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2016-10-16 15:03:07  progressbar:97          26% complete, 7m 9s elapsed, 19m 43s remaining. 59854 spikes found.
2016-10-16 15:03:07  main:222                Processing chunk <Chunk (16961700/63745920), recording 0>...
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2016-10-16 15:08:44  progressbar:97          49% complete, 12m 46s elapsed, 13m 16s remaining. 105691 spikes found.
2016-10-16 15:08:44  main:222                Processing chunk <Chunk (31263900/63745920), recording 0>...
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2016-10-16 15:09:15  progressbar:97          50% complete, 13m 17s elapsed, 13m 11s remaining. 109982 spikes found.
2016-10-16 15:09:15  main:222                Processing chunk <Chunk (31992800/63745920), recording 0>...
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2016-10-16 15:09:45  progressbar:97          51% complete, 13m 47s elapsed, 13m 2s remaining. 113403 spikes found.
2016-10-16 15:09:45  main:222                Processing chunk <Chunk (32761100/63745920), recording 0>...
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2016-10-16 15:10:16  progressbar:97          52% complete, 14m 17s elapsed, 13m 2s remaining. 117862 spikes found.
2016-10-16 15:10:16  main:222                Processing chunk <Chunk (33332400/63745920), recording 0>...
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2016-10-16 15:10:46  progressbar:97          53% complete, 14m 48s elapsed, 12m 56s remaining. 120363 spikes found.
2016-10-16 15:10:46  main:222                Processing chunk <Chunk (34021900/63745920), recording 0>...
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2016-10-16 15:11:16  progressbar:97          55% complete, 15m 18s elapsed, 12m 31s remaining. 124452 spikes found.
2016-10-16 15:11:16  main:222                Processing chunk <Chunk (35066000/63745920), recording 0>...
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2016-10-16 15:12:17  progressbar:97          58% complete, 16m 19s elapsed, 11m 22s remaining. 131762 spikes found.
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2016-10-16 15:16:23  progressbar:97          73% complete, 20m 25s elapsed, 7m 28s remaining. 159353 spikes found.
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2016-10-16 15:16:54  progressbar:97          74% complete, 20m 56s elapsed, 7m 19s remaining. 163096 spikes found.
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2016-10-16 15:17:26  progressbar:97          74% complete, 21m 28s elapsed, 7m 11s remaining. 166535 spikes found.
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2016-10-16 15:17:57  progressbar:97          75% complete, 21m 59s elapsed, 7m 5s remaining. 170035 spikes found.
2016-10-16 15:17:57  main:222                Processing chunk <Chunk (48186200/63745920), recording 0>...
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2016-10-16 15:18:27  progressbar:97          76% complete, 22m 29s elapsed, 6m 58s remaining. 173244 spikes found.
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2016-10-16 15:18:58  progressbar:97          77% complete, 23m 0s elapsed, 6m 47s remaining. 177468 spikes found.
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2016-10-16 15:19:29  progressbar:97          78% complete, 23m 31s elapsed, 6m 37s remaining. 181596 spikes found.
2016-10-16 15:19:29  main:222                Processing chunk <Chunk (49742500/63745920), recording 0>...
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2016-10-16 15:19:59  progressbar:97          79% complete, 24m 1s elapsed, 6m 21s remaining. 186175 spikes found.
2016-10-16 15:19:59  main:222                Processing chunk <Chunk (50392600/63745920), recording 0>...
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2016-10-16 15:20:30  progressbar:97          80% complete, 24m 31s elapsed, 6m 7s remaining. 190738 spikes found.
2016-10-16 15:20:30  main:222                Processing chunk <Chunk (51023000/63745920), recording 0>...
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2016-10-16 15:21:00  progressbar:97          81% complete, 25m 2s elapsed, 5m 38s remaining. 194759 spikes found.
2016-10-16 15:21:00  main:222                Processing chunk <Chunk (52027700/63745920), recording 0>...
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2016-10-16 15:21:30  progressbar:97          82% complete, 25m 32s elapsed, 5m 22s remaining. 197653 spikes found.
2016-10-16 15:21:30  main:222                Processing chunk <Chunk (52658100/63745920), recording 0>...
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2016-10-16 15:22:01  progressbar:97          83% complete, 26m 2s elapsed, 5m 2s remaining. 200614 spikes found.
2016-10-16 15:22:01  main:222                Processing chunk <Chunk (53406700/63745920), recording 0>...
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2016-10-16 15:22:31  progressbar:97          84% complete, 26m 33s elapsed, 4m 53s remaining. 203330 spikes found.
2016-10-16 15:22:31  main:222                Processing chunk <Chunk (53840100/63745920), recording 0>...
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2016-10-16 15:23:02  progressbar:97          85% complete, 27m 4s elapsed, 4m 35s remaining. 207164 spikes found.
2016-10-16 15:23:02  main:222                Processing chunk <Chunk (54490200/63745920), recording 0>...
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2016-10-16 15:23:32  progressbar:97          86% complete, 27m 34s elapsed, 4m 25s remaining. 210913 spikes found.
2016-10-16 15:23:32  main:222                Processing chunk <Chunk (54943300/63745920), recording 0>...
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2016-10-16 15:24:04  progressbar:97          87% complete, 28m 6s elapsed, 4m 10s remaining. 214651 spikes found.
2016-10-16 15:24:04  main:222                Processing chunk <Chunk (55494900/63745920), recording 0>...
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2016-10-16 15:24:35  progressbar:97          88% complete, 28m 37s elapsed, 3m 49s remaining. 219674 spikes found.
2016-10-16 15:24:35  main:222                Processing chunk <Chunk (56223800/63745920), recording 0>...
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2016-10-16 15:25:07  progressbar:97          89% complete, 29m 9s elapsed, 3m 35s remaining. 223651 spikes found.
2016-10-16 15:25:07  main:222                Processing chunk <Chunk (56755700/63745920), recording 0>...
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2016-10-16 15:25:37  progressbar:97          90% complete, 29m 39s elapsed, 3m 14s remaining. 227008 spikes found.
2016-10-16 15:25:37  main:222                Processing chunk <Chunk (57464900/63745920), recording 0>...
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2016-10-16 15:26:09  progressbar:97          91% complete, 30m 11s elapsed, 2m 50s remaining. 229428 spikes found.
2016-10-16 15:26:09  main:222                Processing chunk <Chunk (58252900/63745920), recording 0>...
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2016-10-16 15:26:39  progressbar:97          93% complete, 30m 41s elapsed, 2m 16s remaining. 232632 spikes found.
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2016-10-16 15:27:09  progressbar:97          94% complete, 31m 11s elapsed, 1m 56s remaining. 234669 spikes found.
2016-10-16 15:27:09  main:222                Processing chunk <Chunk (60006200/63745920), recording 0>...
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2016-10-16 15:27:39  progressbar:97          95% complete, 31m 41s elapsed, 1m 27s remaining. 237819 spikes found.
2016-10-16 15:27:39  main:222                Processing chunk <Chunk (60932100/63745920), recording 0>...
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2016-10-16 15:28:12  progressbar:97          96% complete, 32m 14s elapsed, 1m 18s remaining. 240762 spikes found.
2016-10-16 15:28:12  main:222                Processing chunk <Chunk (61247300/63745920), recording 0>...
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2016-10-16 15:28:43  progressbar:97          97% complete, 32m 45s elapsed, 59s remaining. 243496 spikes found.
2016-10-16 15:28:43  main:222                Processing chunk <Chunk (61877700/63745920), recording 0>...
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2016-10-16 15:29:15  progressbar:97          98% complete, 33m 17s elapsed, 35s remaining. 245748 spikes found.
2016-10-16 15:29:15  main:222                Processing chunk <Chunk (62626300/63745920), recording 0>...
2016-10-16 15:29:15  main:222                Processing chunk <Chunk (62646000/63745920), recording 0>...
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2016-10-16 15:29:18  main:222                Processing chunk <Chunk (62744500/63745920), recording 0>...
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2016-10-16 15:29:23  main:222                Processing chunk <Chunk (62902100/63745920), recording 0>...
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2016-10-16 15:29:24  main:222                Processing chunk <Chunk (62941500/63745920), recording 0>...
2016-10-16 15:29:25  main:222                Processing chunk <Chunk (62961200/63745920), recording 0>...
2016-10-16 15:29:25  main:222                Processing chunk <Chunk (62980900/63745920), recording 0>...
2016-10-16 15:29:26  main:222                Processing chunk <Chunk (63000600/63745920), recording 0>...
2016-10-16 15:29:26  main:222                Processing chunk <Chunk (63020300/63745920), recording 0>...
2016-10-16 15:29:27  main:222                Processing chunk <Chunk (63040000/63745920), recording 0>...
2016-10-16 15:29:27  main:222                Processing chunk <Chunk (63059700/63745920), recording 0>...
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2016-10-16 15:29:28  main:222                Processing chunk <Chunk (63099100/63745920), recording 0>...
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2016-10-16 15:29:29  main:222                Processing chunk <Chunk (63177900/63745920), recording 0>...
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2016-10-16 15:29:45  progressbar:97          99% complete, 33m 47s elapsed, 7s remaining. 248432 spikes found.
2016-10-16 15:29:45  main:222                Processing chunk <Chunk (63512800/63745920), recording 0>...
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2016-10-16 15:29:50  progressbar:97          100% complete, 33m 52s elapsed, 0s remaining. 249121 spikes found.