2017-01-21 00:46:50  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT6/20170120_1008um_540um_170120_130827/20170120_1008um_540um_170120_130827.dat>
2017-01-21 00:46:50  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT6/20170120_1008um_540um_170120_130827/5/20170120_1008um_540um_170120_130827_sh5',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 500.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '5.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT6/20170120_1008um_540um_170120_130827/20170120_1008um_540um_170120_130827.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-01-21 00:47:06  main:200                Threshold: DoubleThreshold(strong=array([ 258.75221603,  296.53076244,  225.64644102,  240.78134313,
        218.80154689,  221.91117372,  252.69337626,  243.65459788,
        263.81429944,  284.00558984,  284.51270896,  284.31812983,
        245.28607301,  287.5045398 ,  280.69820898,  288.87539704,
        368.59162947,  317.91997515,  305.93555498,  301.81694928,
        283.46140165,  283.31874598,  289.2201243 ,  274.90554668,
        268.71959531,  263.67872658,  273.8798258 ,  285.1378183 ,
        270.20187   ,  324.89649847,  314.13974367,  309.81659821,
        220.55898339,  230.07985726,  264.31506825,  249.35129639,
        251.56296414,  266.56991553,  283.87349157,  285.97305272,
        306.51973563,  318.1248806 ,  321.41874681,  310.8626526 ,
        272.64602848,  265.6776415 ,  278.96163877,  307.42869368,
        223.87219162,  222.54066398,  231.01884719,  234.49759186,
        230.34114998,  231.87239687,  233.74487698,  239.14779654,
        213.71931863,  237.90893283,  232.8116564 ,  210.78027037,
        285.1334317 ,  253.7131139 ,  288.63110052,  284.70640857,
        269.21101794,  273.48422241,  246.07917074,  254.55213096,
        244.88922078,  241.03698136,  247.47038401,  254.92330871,
        256.45361831,  241.52131815,  244.61743177,  246.35403105,
        242.32586654,  236.46184206,  231.69394786,  245.956528  ,
        322.39310285,  346.10058901,  310.09575321,  320.94786133,
        310.94155657,  320.76578641,  310.9911712 ,  303.41302144,
        308.39247378,  308.02161074,  265.48434441,  282.32226398,
        269.34902892,  262.28659904,  260.30744383,  269.1947851 ]), weak=array([ 115.0009849 ,  131.79144997,  100.28730712,  107.01393028,
         97.24513195,   98.62718832,  112.30816723,  108.29093239,
        117.25079975,  126.22470659,  126.45009287,  126.36361326,
        109.01603245,  127.77979547,  124.75475955,  128.38906535,
        163.81850198,  141.29776673,  135.97135777,  134.14086635,
        125.98284518,  125.91944266,  128.54227747,  122.18024297,
        119.43093125,  117.19054515,  121.72436702,  126.72791924,
        120.08972   ,  144.39844377,  139.61766386,  137.69626587,
         98.02621484,  102.25771434,  117.47336367,  110.82279839,
        111.80576184,  118.47551801,  126.16599625,  127.09913454,
        136.23099362,  141.38883582,  142.85277636,  138.16117893,
        121.17601266,  118.07895178,  123.98295056,  136.63497497,
         99.49875183,   98.90696177,  102.67504319,  104.22115194,
        102.37384444,  103.05439861,  103.88661199,  106.28790957,
         94.98636383,  105.73730348,  103.47184729,   93.68012016,
        126.72596964,  112.76138396,  128.28048912,  126.53618158,
        119.6493413 ,  121.54854329,  109.36852033,  113.13428042,
        108.83965368,  107.12754727,  109.98683734,  113.29924832,
        113.97938591,  107.34280807,  108.71885857,  109.49068047,
        107.70038513,  105.09415203,  102.97508794,  109.31401245,
        143.28582349,  153.822484  ,  137.82033476,  142.64349392,
        138.19624736,  142.56257174,  138.21829831,  134.85023175,
        137.06332168,  136.89849366,  117.99304196,  125.47656177,
        119.71067952,  116.5718218 ,  115.69219726,  119.64212671]))
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2017-01-21 01:31:25  progressbar:97          42% complete, 44m 19s elapsed, 59m 18s remaining. 256934 spikes found.
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2017-01-21 01:31:56  progressbar:97          43% complete, 44m 49s elapsed, 59m 11s remaining. 261874 spikes found.
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2017-01-21 01:44:35  main:222                Processing chunk <Chunk (163214500/323954640), recording 0>...
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2017-01-21 01:45:06  progressbar:97          50% complete, 57m 59s elapsed, 56m 34s remaining. 382490 spikes found.
2017-01-21 01:45:06  main:222                Processing chunk <Chunk (163982800/323954640), recording 0>...
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2017-01-21 01:45:36  progressbar:97          50% complete, 58m 29s elapsed, 56m 30s remaining. 386857 spikes found.
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2017-01-21 01:46:07  progressbar:97          51% complete, 59m 0s elapsed, 56m 33s remaining. 390599 spikes found.
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2017-01-21 01:46:37  progressbar:97          51% complete, 59m 31s elapsed, 56m 37s remaining. 394015 spikes found.
2017-01-21 01:46:37  main:222                Processing chunk <Chunk (166011900/323954640), recording 0>...
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2017-01-21 01:47:08  progressbar:97          51% complete, 1h 0m 2s elapsed, 56m 38s remaining. 397164 spikes found.
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2017-01-21 01:51:12  progressbar:97          53% complete, 1h 4m 6s elapsed, 56m 34s remaining. 420775 spikes found.
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2017-01-21 01:52:14  progressbar:97          53% complete, 1h 5m 8s elapsed, 56m 33s remaining. 426344 spikes found.
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2017-01-21 01:52:45  progressbar:97          53% complete, 1h 5m 38s elapsed, 56m 30s remaining. 428983 spikes found.
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2017-01-21 01:53:15  progressbar:97          53% complete, 1h 6m 9s elapsed, 56m 28s remaining. 431801 spikes found.
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2017-01-21 02:04:55  progressbar:97          59% complete, 1h 17m 49s elapsed, 53m 50s remaining. 491675 spikes found.
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2017-01-21 02:06:56  progressbar:97          60% complete, 1h 19m 50s elapsed, 53m 6s remaining. 500513 spikes found.
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2017-01-21 02:07:57  progressbar:97          60% complete, 1h 20m 50s elapsed, 52m 47s remaining. 505136 spikes found.
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