2017-02-08 19:12:59  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT6/20170207_2268um_1476um_170207_232846/20170207_2268um_1476um_170207_232846.dat>
2017-02-08 19:12:59  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT6/20170207_2268um_1476um_170207_232846/7/20170207_2268um_1476um_170207_232846_sh7',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 500.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '7.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT6/20170207_2268um_1476um_170207_232846/20170207_2268um_1476um_170207_232846.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-02-08 19:13:36  main:200                Threshold: DoubleThreshold(strong=array([ 252.70047018,  262.68575525,  267.18116844,  254.74043991,
        262.93502992,  257.81565088,  255.1921133 ,  259.2429552 ,
        260.77795267,  275.55461525,  278.82301708,  277.30357048,
        271.40719657,  281.19887305,  279.59584755,  270.44887864,
        290.60262724,  295.33368234,  290.96611256,  267.47062896,
        275.83379492,  277.36236068,  274.3715736 ,  273.9857133 ,
        261.61737846,  250.5402136 ,  265.00640834,  272.44361248,
        256.32034888,  243.03022119,  275.15113419,  281.35342698,
        208.19647706,  217.57979334,  220.15066185,  209.60501188,
        222.22049905,  250.39014715,  248.66626562,  155.0992036 ,
        210.72361593,  222.79030815,  224.85152973,  238.98915572,
        244.12037418,  210.05672227,  202.32036484,  224.85816786,
        209.09923103,  203.56981203,  228.52672775,  224.37597134,
        241.89437587,  236.26021962,  251.96674939,  249.05296791,
        229.33494528,  239.75229642,  227.09398379,  224.8803643 ,
        253.39640622,  233.40164181,  267.94844511,  274.40857145,
        150.99599681,  184.71964801,  276.50850709,  258.4072985 ,
        243.36664114,  238.86525386,  252.79024588,  258.4067713 ,
        259.96085407,  257.83239781,  231.42158361,  233.16776385,
        233.36158867,  223.80892283,  214.3575507 ,  223.62491663,
        269.79060406,  269.22510953,  269.42728791,  257.48870505,
        271.92055647,  271.79106535,  269.25657596,  275.81064098,
        266.25848886,  264.64238803,  222.76531914,  242.3411503 ,
        254.74760001,  242.63172715,  249.47194063,  253.5364941 ]), weak=array([ 112.31132008,  116.74922456,  118.74718597,  113.21797329,
        116.8600133 ,  114.58473373,  113.41871702,  115.2190912 ,
        115.9013123 ,  122.46871789,  123.92134093,  123.24603132,
        120.6254207 ,  124.97727691,  124.26482114,  120.19950162,
        129.15672322,  131.25941437,  129.31827225,  118.87583509,
        122.59279774,  123.2721603 ,  121.9429216 ,  121.77142813,
        116.27439043,  111.35120605,  117.78062593,  121.08604999,
        113.92015506,  108.01343164,  122.28939297,  125.04596755,
         92.53176758,   96.70213037,   97.8447386 ,   93.15778306,
         98.76466625,  111.28450984,  110.51834028,   68.93297938,
         93.65494041,   99.01791473,   99.93401321,  106.21740254,
        108.49794408,   93.35854323,   89.92016215,   99.9369635 ,
         92.93299157,   90.47547202,  101.56743456,   99.72265393,
        107.5086115 ,  105.00454205,  111.98522195,  110.69020796,
        101.92664235,  106.55657618,  100.93065946,   99.94682858,
        112.62062499,  103.73406303,  119.08819782,  121.95936509,
         67.10933192,   82.09762134,  122.89266982,  114.84768822,
        108.16295162,  106.16233505,  112.35122039,  114.84745391,
        115.53815737,  114.59217681,  102.85403716,  103.63011726,
        103.71626163,   99.47063237,   95.27002253,   99.38885183,
        119.90693514,  119.65560424,  119.74546129,  114.43942447,
        120.85358065,  120.79602904,  119.66958932,  122.5825071 ,
        118.33710616,  117.61883912,   99.00680851,  107.70717791,
        113.22115556,  107.83632318,  110.87641806,  112.68288627]))
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2017-02-08 19:14:07  progressbar:97          1% complete, 30s elapsed, 33m 21s remaining. 379 spikes found.
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2017-02-08 19:14:37  progressbar:97          2% complete, 1m 0s elapsed, 34m 57s remaining. 860 spikes found.
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2017-02-08 19:20:12  progressbar:97          18% complete, 6m 34s elapsed, 29m 0s remaining. 4891 spikes found.
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2017-02-08 19:26:45  progressbar:97          36% complete, 13m 8s elapsed, 22m 50s remaining. 8126 spikes found.
2017-02-08 19:26:45  main:222                Processing chunk <Chunk (30594100/83743200), recording 0>...
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2017-02-08 19:27:16  progressbar:97          37% complete, 13m 39s elapsed, 22m 47s remaining. 8336 spikes found.
2017-02-08 19:27:16  main:222                Processing chunk <Chunk (31382100/83743200), recording 0>...
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2017-02-08 19:27:46  progressbar:97          38% complete, 14m 9s elapsed, 22m 40s remaining. 8549 spikes found.
2017-02-08 19:27:46  main:222                Processing chunk <Chunk (32189800/83743200), recording 0>...
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2017-02-08 19:28:17  progressbar:97          39% complete, 14m 40s elapsed, 22m 33s remaining. 8725 spikes found.
2017-02-08 19:28:17  main:222                Processing chunk <Chunk (32997500/83743200), recording 0>...
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2017-02-08 19:28:47  progressbar:97          40% complete, 15m 10s elapsed, 22m 27s remaining. 8880 spikes found.
2017-02-08 19:28:47  main:222                Processing chunk <Chunk (33765800/83743200), recording 0>...
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2017-02-08 19:29:18  progressbar:97          41% complete, 15m 41s elapsed, 22m 27s remaining. 9041 spikes found.
2017-02-08 19:29:18  main:222                Processing chunk <Chunk (34435600/83743200), recording 0>...
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2017-02-08 19:29:48  progressbar:97          41% complete, 16m 11s elapsed, 22m 27s remaining. 9178 spikes found.
2017-02-08 19:29:48  main:222                Processing chunk <Chunk (35085700/83743200), recording 0>...
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2017-02-08 19:30:18  progressbar:97          43% complete, 16m 41s elapsed, 21m 55s remaining. 9417 spikes found.
2017-02-08 19:30:18  main:222                Processing chunk <Chunk (36208600/83743200), recording 0>...
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2017-02-08 19:30:49  progressbar:97          44% complete, 17m 12s elapsed, 21m 23s remaining. 9685 spikes found.
2017-02-08 19:30:49  main:222                Processing chunk <Chunk (37331500/83743200), recording 0>...
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2017-02-08 19:31:19  progressbar:97          45% complete, 17m 42s elapsed, 20m 47s remaining. 10010 spikes found.
2017-02-08 19:31:19  main:222                Processing chunk <Chunk (38513500/83743200), recording 0>...
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2017-02-08 19:33:51  progressbar:97          53% complete, 20m 14s elapsed, 17m 41s remaining. 13666 spikes found.
2017-02-08 19:33:51  main:222                Processing chunk <Chunk (44679600/83743200), recording 0>...
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2017-02-08 19:34:21  progressbar:97          54% complete, 20m 44s elapsed, 17m 18s remaining. 14956 spikes found.
2017-02-08 19:34:21  main:222                Processing chunk <Chunk (45644900/83743200), recording 0>...
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2017-02-08 19:34:51  progressbar:97          55% complete, 21m 14s elapsed, 16m 47s remaining. 16253 spikes found.
2017-02-08 19:34:51  main:222                Processing chunk <Chunk (46767800/83743200), recording 0>...
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2017-02-08 19:35:21  progressbar:97          56% complete, 21m 44s elapsed, 16m 33s remaining. 17605 spikes found.
2017-02-08 19:35:21  main:222                Processing chunk <Chunk (47536100/83743200), recording 0>...
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2017-02-08 19:35:51  progressbar:97          57% complete, 22m 14s elapsed, 16m 30s remaining. 18906 spikes found.
2017-02-08 19:35:51  main:222                Processing chunk <Chunk (48068000/83743200), recording 0>...
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2017-02-08 19:36:22  progressbar:97          58% complete, 22m 45s elapsed, 16m 22s remaining. 19897 spikes found.
2017-02-08 19:36:22  main:222                Processing chunk <Chunk (48698400/83743200), recording 0>...
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2017-02-08 19:36:52  progressbar:97          58% complete, 23m 15s elapsed, 16m 9s remaining. 20739 spikes found.
2017-02-08 19:36:52  main:222                Processing chunk <Chunk (49407600/83743200), recording 0>...
2017-02-08 19:36:52  main:222                Processing chunk <Chunk (49427300/83743200), recording 0>...
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2017-02-08 19:37:22  progressbar:97          59% complete, 23m 45s elapsed, 15m 56s remaining. 21771 spikes found.
2017-02-08 19:37:22  main:222                Processing chunk <Chunk (50116800/83743200), recording 0>...
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2017-02-08 19:37:53  progressbar:97          60% complete, 24m 16s elapsed, 15m 44s remaining. 23099 spikes found.
2017-02-08 19:37:53  main:222                Processing chunk <Chunk (50806300/83743200), recording 0>...
2017-02-08 19:37:54  main:222                Processing chunk <Chunk (50826000/83743200), recording 0>...
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2017-02-08 19:38:23  progressbar:97          61% complete, 24m 46s elapsed, 15m 34s remaining. 24378 spikes found.
2017-02-08 19:38:23  main:222                Processing chunk <Chunk (51417000/83743200), recording 0>...
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2017-02-08 19:38:53  main:222                Processing chunk <Chunk (52086800/83743200), recording 0>...
2017-02-08 19:38:54  progressbar:97          62% complete, 25m 17s elapsed, 15m 21s remaining. 25501 spikes found.
2017-02-08 19:38:54  main:222                Processing chunk <Chunk (52106500/83743200), recording 0>...
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2017-02-08 19:39:24  progressbar:97          62% complete, 25m 47s elapsed, 15m 11s remaining. 27028 spikes found.
2017-02-08 19:39:24  main:222                Processing chunk <Chunk (52697500/83743200), recording 0>...
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2017-02-08 19:39:55  progressbar:97          63% complete, 26m 18s elapsed, 14m 58s remaining. 28193 spikes found.
2017-02-08 19:39:55  main:222                Processing chunk <Chunk (53367300/83743200), recording 0>...
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2017-02-08 19:40:25  progressbar:97          64% complete, 26m 48s elapsed, 14m 43s remaining. 29784 spikes found.
2017-02-08 19:40:25  main:222                Processing chunk <Chunk (54056800/83743200), recording 0>...
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2017-02-08 19:40:55  progressbar:97          65% complete, 27m 18s elapsed, 14m 21s remaining. 31031 spikes found.
2017-02-08 19:40:55  main:222                Processing chunk <Chunk (54884200/83743200), recording 0>...
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2017-02-08 19:41:26  progressbar:97          66% complete, 27m 49s elapsed, 13m 58s remaining. 32272 spikes found.
2017-02-08 19:41:26  main:222                Processing chunk <Chunk (55751000/83743200), recording 0>...
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2017-02-08 19:41:57  progressbar:97          67% complete, 28m 20s elapsed, 13m 31s remaining. 33347 spikes found.
2017-02-08 19:41:57  main:222                Processing chunk <Chunk (56696600/83743200), recording 0>...
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2017-02-08 19:42:27  progressbar:97          68% complete, 28m 50s elapsed, 13m 13s remaining. 35216 spikes found.
2017-02-08 19:42:27  main:222                Processing chunk <Chunk (57405800/83743200), recording 0>...
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2017-02-08 19:42:57  progressbar:97          69% complete, 29m 20s elapsed, 12m 50s remaining. 36425 spikes found.
2017-02-08 19:42:57  main:222                Processing chunk <Chunk (58252900/83743200), recording 0>...
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2017-02-08 19:43:27  progressbar:97          70% complete, 29m 50s elapsed, 12m 30s remaining. 38167 spikes found.
2017-02-08 19:43:27  main:222                Processing chunk <Chunk (59001500/83743200), recording 0>...
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2017-02-08 19:43:58  progressbar:97          71% complete, 30m 21s elapsed, 12m 9s remaining. 39968 spikes found.
2017-02-08 19:43:58  main:222                Processing chunk <Chunk (59789500/83743200), recording 0>...
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2017-02-08 19:44:28  progressbar:97          72% complete, 30m 51s elapsed, 11m 37s remaining. 41034 spikes found.
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