2017-01-30 15:46:09  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT8/20160130_0um_144um_170130_143246/20160130_0um_144um_170130_143246.dat>
2017-01-30 15:46:09  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT8/20160130_0um_144um_170130_143246/10/20160130_0um_144um_170130_143246_sh10',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 500.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '10.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT8/20160130_0um_144um_170130_143246/20160130_0um_144um_170130_143246.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-01-30 15:46:47  main:200                Threshold: DoubleThreshold(strong=array([ 284.50307127,  284.91128873,  259.00355189,  253.33785447,
        255.15882609,  258.78136446,  257.95376623,  254.50672119,
        260.24534919,  289.05184212,  294.90036588,  296.5655923 ,
        275.40402159,  292.2579579 ,  313.09158071,  292.75385903,
        294.43450137,  288.65427791,  288.55431415,  281.95104211,
        283.66232539,  288.83157926,  272.03239434,  265.0644062 ,
        278.70360266,  271.33321518,  277.90363699,  273.3702271 ,
        264.90533226,  276.19333902,  268.21070629,  267.72373349,
        282.16347492,  278.95928811,  272.5227615 ,  266.25054705,
        264.15946808,  260.87199471,  263.61924428,  262.72913031,
        271.14294608,  290.16763949,  288.63044849,  286.45194928,
        268.72915511,  270.93291998,  273.07464553,  282.12243185,
        263.19165616,  254.01899783,  253.32154299,  263.54680025,
        247.10709371,  254.44672992,  273.74100072,  264.46285075,
        274.62644714,  277.34159005,  260.21664455,  277.02971639,
        257.89265652,  279.44000436,  261.59788133,  266.16286827,
         99.57182615,  114.39938669,  116.78270605,  282.57878298,
        111.71862694,  110.30535491,  112.23647939,  284.55060802,
        111.19629765,  110.02362787,  243.81048155,  244.22823941,
        253.92330673,  259.39875309,  253.88644691,  248.33289926,
        282.60627138,  296.74082673,  281.05603476,  276.72818895,
        286.71312112,  282.48067898,  284.10551616,  289.25952701,
        275.53833038,  277.06647671,  278.36068033,  283.3959847 ,
        108.54377819,  111.02872014,  107.81822529,  107.03586354]), weak=array([ 126.44580946,  126.62723944,  115.11268973,  112.59460199,
        113.40392271,  115.01393976,  114.64611833,  113.11409831,
        115.66459964,  128.46748538,  131.06682928,  131.80692991,
        122.40178737,  129.89242573,  139.15181365,  130.11282623,
        130.85977839,  128.29079018,  128.24636184,  125.31157427,
        126.07214462,  128.36959078,  120.90328637,  117.80640276,
        123.86826785,  120.59254008,  123.51272755,  121.49787871,
        117.73570323,  122.75259512,  119.20475835,  118.98832599,
        125.40598885,  123.98190583,  121.12122733,  118.33357646,
        117.40420803,  115.94310876,  117.16410857,  116.76850236,
        120.50797604,  128.96339533,  128.28019933,  127.31197746,
        119.43518005,  120.4146311 ,  121.36650912,  125.38774749,
        116.9740694 ,  112.89733237,  112.58735244,  117.13191122,
        109.82537498,  113.08743552,  121.66266699,  117.53904478,
        122.05619873,  123.26292891,  115.65184202,  123.1243184 ,
        114.61895845,  124.19555749,  116.26572504,  118.29460812,
         44.25414495,   50.84417186,   51.90342491,  125.59057021,
         49.65272308,   49.02460218,   49.88287973,  126.4669369 ,
         49.42057673,   48.89939016,  108.36021402,  108.54588418,
        112.85480299,  115.28833471,  112.83842085,  110.37017745,
        125.60278728,  131.88481188,  124.91379323,  122.9903062 ,
        127.42805383,  125.54696844,  126.26911829,  128.55978978,
        122.46148017,  123.14065631,  123.71585792,  125.95377098,
         48.24167919,   49.34609784,   47.91921124,   47.57149491]))
2017-01-30 15:46:47  main:222                Processing chunk <Chunk (0/57355200), recording 0>...
2017-01-30 15:46:48  progressbar:97          0% complete, 0s elapsed. 50 spikes found.
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2017-01-30 15:47:18  progressbar:97          0% complete, 30s elapsed, 55m 8s remaining. 1308 spikes found.
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2017-01-30 15:47:48  progressbar:97          2% complete, 1m 1s elapsed, 49m 20s remaining. 1939 spikes found.
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2017-01-30 15:48:19  progressbar:97          3% complete, 1m 32s elapsed, 45m 31s remaining. 2669 spikes found.
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2017-01-30 15:49:20  progressbar:97          6% complete, 2m 33s elapsed, 39m 27s remaining. 3498 spikes found.
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2017-01-30 15:49:50  progressbar:97          7% complete, 3m 3s elapsed, 38m 8s remaining. 3856 spikes found.
2017-01-30 15:49:50  main:222                Processing chunk <Chunk (4255200/57355200), recording 0>...
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2017-01-30 15:50:20  progressbar:97          8% complete, 3m 33s elapsed, 36m 45s remaining. 4268 spikes found.
2017-01-30 15:50:20  main:222                Processing chunk <Chunk (5062900/57355200), recording 0>...
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2017-01-30 15:50:51  progressbar:97          10% complete, 4m 3s elapsed, 36m 19s remaining. 4585 spikes found.
2017-01-30 15:50:51  main:222                Processing chunk <Chunk (5772100/57355200), recording 0>...
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2017-01-30 15:51:21  progressbar:97          11% complete, 4m 34s elapsed, 34m 56s remaining. 4844 spikes found.
2017-01-30 15:51:21  main:222                Processing chunk <Chunk (6638900/57355200), recording 0>...
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2017-01-30 15:51:52  progressbar:97          13% complete, 5m 5s elapsed, 33m 52s remaining. 5138 spikes found.
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2017-01-30 15:54:23  progressbar:97          20% complete, 7m 36s elapsed, 29m 30s remaining. 6050 spikes found.
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2017-01-30 15:54:54  progressbar:97          22% complete, 8m 6s elapsed, 28m 40s remaining. 6279 spikes found.
2017-01-30 15:54:54  main:222                Processing chunk <Chunk (12647400/57355200), recording 0>...
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2017-01-30 15:55:24  progressbar:97          23% complete, 8m 37s elapsed, 28m 0s remaining. 6526 spikes found.
2017-01-30 15:55:24  main:222                Processing chunk <Chunk (13494500/57355200), recording 0>...
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2017-01-30 15:55:54  progressbar:97          24% complete, 9m 7s elapsed, 27m 27s remaining. 6716 spikes found.
2017-01-30 15:55:54  main:222                Processing chunk <Chunk (14302200/57355200), recording 0>...
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2017-01-30 15:56:25  progressbar:97          26% complete, 9m 37s elapsed, 26m 55s remaining. 7024 spikes found.
2017-01-30 15:56:25  main:222                Processing chunk <Chunk (15109900/57355200), recording 0>...
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2017-01-30 15:56:55  progressbar:97          27% complete, 10m 8s elapsed, 26m 15s remaining. 7226 spikes found.
2017-01-30 15:56:55  main:222                Processing chunk <Chunk (15976700/57355200), recording 0>...
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2017-01-30 15:57:26  progressbar:97          29% complete, 10m 38s elapsed, 25m 46s remaining. 7433 spikes found.
2017-01-30 15:57:26  main:222                Processing chunk <Chunk (16764700/57355200), recording 0>...
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2017-01-30 15:57:56  progressbar:97          30% complete, 11m 9s elapsed, 25m 3s remaining. 7670 spikes found.
2017-01-30 15:57:56  main:222                Processing chunk <Chunk (17670900/57355200), recording 0>...
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2017-01-30 15:58:27  progressbar:97          32% complete, 11m 39s elapsed, 24m 32s remaining. 7975 spikes found.
2017-01-30 15:58:27  main:222                Processing chunk <Chunk (18478600/57355200), recording 0>...
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2017-01-30 15:58:57  progressbar:97          33% complete, 12m 10s elapsed, 23m 59s remaining. 8313 spikes found.
2017-01-30 15:58:57  main:222                Processing chunk <Chunk (19306000/57355200), recording 0>...
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2017-01-30 15:59:27  progressbar:97          34% complete, 12m 40s elapsed, 23m 34s remaining. 8665 spikes found.
2017-01-30 15:59:27  main:222                Processing chunk <Chunk (20054600/57355200), recording 0>...
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2017-01-30 15:59:57  progressbar:97          36% complete, 13m 10s elapsed, 23m 4s remaining. 8961 spikes found.
2017-01-30 15:59:57  main:222                Processing chunk <Chunk (20842600/57355200), recording 0>...
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2017-01-30 16:00:28  progressbar:97          37% complete, 13m 41s elapsed, 22m 30s remaining. 9256 spikes found.
2017-01-30 16:00:28  main:222                Processing chunk <Chunk (21689700/57355200), recording 0>...
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2017-01-30 16:00:59  progressbar:97          39% complete, 14m 11s elapsed, 21m 57s remaining. 9557 spikes found.
2017-01-30 16:00:59  main:222                Processing chunk <Chunk (22517100/57355200), recording 0>...
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2017-01-30 16:01:29  progressbar:97          40% complete, 14m 42s elapsed, 21m 25s remaining. 9863 spikes found.
2017-01-30 16:01:29  main:222                Processing chunk <Chunk (23344500/57355200), recording 0>...
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2017-01-30 16:01:59  progressbar:97          42% complete, 15m 12s elapsed, 20m 43s remaining. 10025 spikes found.
2017-01-30 16:01:59  main:222                Processing chunk <Chunk (24270400/57355200), recording 0>...
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2017-01-30 16:02:30  progressbar:97          43% complete, 15m 42s elapsed, 20m 13s remaining. 10234 spikes found.
2017-01-30 16:02:30  main:222                Processing chunk <Chunk (25078100/57355200), recording 0>...
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2017-01-30 16:03:00  progressbar:97          44% complete, 16m 13s elapsed, 19m 49s remaining. 10368 spikes found.
2017-01-30 16:03:00  main:222                Processing chunk <Chunk (25807000/57355200), recording 0>...
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2017-01-30 16:03:30  progressbar:97          46% complete, 16m 43s elapsed, 19m 22s remaining. 10544 spikes found.
2017-01-30 16:03:30  main:222                Processing chunk <Chunk (26575300/57355200), recording 0>...
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2017-01-30 16:04:01  progressbar:97          47% complete, 17m 13s elapsed, 18m 57s remaining. 10715 spikes found.
2017-01-30 16:04:01  main:222                Processing chunk <Chunk (27304200/57355200), recording 0>...
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2017-01-30 16:04:31  progressbar:97          48% complete, 17m 44s elapsed, 18m 37s remaining. 10917 spikes found.
2017-01-30 16:04:31  main:222                Processing chunk <Chunk (27974000/57355200), recording 0>...
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2017-01-30 16:05:01  progressbar:97          50% complete, 18m 14s elapsed, 18m 14s remaining. 11194 spikes found.
2017-01-30 16:05:01  main:222                Processing chunk <Chunk (28683200/57355200), recording 0>...
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2017-01-30 16:05:31  progressbar:97          51% complete, 18m 44s elapsed, 17m 49s remaining. 11416 spikes found.
2017-01-30 16:05:31  main:222                Processing chunk <Chunk (29392400/57355200), recording 0>...
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2017-01-30 16:06:02  progressbar:97          52% complete, 19m 14s elapsed, 17m 26s remaining. 11680 spikes found.
2017-01-30 16:06:02  main:222                Processing chunk <Chunk (30081900/57355200), recording 0>...
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2017-01-30 16:06:32  progressbar:97          53% complete, 19m 44s elapsed, 17m 0s remaining. 11940 spikes found.
2017-01-30 16:06:32  main:222                Processing chunk <Chunk (30810800/57355200), recording 0>...
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2017-01-30 16:07:03  progressbar:97          55% complete, 20m 15s elapsed, 16m 33s remaining. 12274 spikes found.
2017-01-30 16:07:03  main:222                Processing chunk <Chunk (31559400/57355200), recording 0>...
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2017-01-30 16:07:33  progressbar:97          56% complete, 20m 46s elapsed, 16m 8s remaining. 12679 spikes found.
2017-01-30 16:07:33  main:222                Processing chunk <Chunk (32268600/57355200), recording 0>...
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2017-01-30 16:08:03  progressbar:97          57% complete, 21m 16s elapsed, 15m 32s remaining. 13115 spikes found.
2017-01-30 16:08:03  main:222                Processing chunk <Chunk (33135400/57355200), recording 0>...
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2017-01-30 16:08:34  progressbar:97          59% complete, 21m 46s elapsed, 15m 2s remaining. 13457 spikes found.
2017-01-30 16:08:34  main:222                Processing chunk <Chunk (33923400/57355200), recording 0>...
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2017-01-30 16:09:04  progressbar:97          60% complete, 22m 17s elapsed, 14m 28s remaining. 13827 spikes found.
2017-01-30 16:09:04  main:222                Processing chunk <Chunk (34770500/57355200), recording 0>...
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2017-01-30 16:10:05  progressbar:97          63% complete, 23m 18s elapsed, 13m 19s remaining. 14542 spikes found.
2017-01-30 16:10:05  main:222                Processing chunk <Chunk (36484400/57355200), recording 0>...
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2017-01-30 16:10:36  progressbar:97          65% complete, 23m 48s elapsed, 12m 46s remaining. 14825 spikes found.
2017-01-30 16:10:36  main:222                Processing chunk <Chunk (37331500/57355200), recording 0>...
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2017-01-30 16:11:06  progressbar:97          66% complete, 24m 19s elapsed, 12m 16s remaining. 15141 spikes found.
2017-01-30 16:11:06  main:222                Processing chunk <Chunk (38119500/57355200), recording 0>...
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2017-01-30 16:11:36  progressbar:97          67% complete, 24m 49s elapsed, 11m 41s remaining. 15425 spikes found.
2017-01-30 16:11:36  main:222                Processing chunk <Chunk (38986300/57355200), recording 0>...
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2017-01-30 16:12:06  progressbar:97          69% complete, 25m 19s elapsed, 11m 9s remaining. 15719 spikes found.
2017-01-30 16:12:06  main:222                Processing chunk <Chunk (39813700/57355200), recording 0>...
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2017-01-30 16:12:36  progressbar:97          70% complete, 25m 49s elapsed, 10m 33s remaining. 15936 spikes found.
2017-01-30 16:12:36  main:222                Processing chunk <Chunk (40719900/57355200), recording 0>...
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2017-01-30 16:13:07  progressbar:97          72% complete, 26m 19s elapsed, 9m 56s remaining. 16154 spikes found.
2017-01-30 16:13:07  main:222                Processing chunk <Chunk (41626100/57355200), recording 0>...
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2017-01-30 16:13:37  progressbar:97          74% complete, 26m 49s elapsed, 9m 22s remaining. 16387 spikes found.
2017-01-30 16:13:37  main:222                Processing chunk <Chunk (42512600/57355200), recording 0>...
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2017-01-30 16:14:07  progressbar:97          75% complete, 27m 19s elapsed, 8m 54s remaining. 16590 spikes found.
2017-01-30 16:14:07  main:222                Processing chunk <Chunk (43261200/57355200), recording 0>...
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2017-01-30 16:14:38  progressbar:97          76% complete, 27m 50s elapsed, 8m 33s remaining. 16992 spikes found.
2017-01-30 16:14:38  main:222                Processing chunk <Chunk (43871900/57355200), recording 0>...
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2017-01-30 16:15:08  progressbar:97          77% complete, 28m 21s elapsed, 8m 9s remaining. 17322 spikes found.
2017-01-30 16:15:08  main:222                Processing chunk <Chunk (44541700/57355200), recording 0>...
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2017-01-30 16:15:38  progressbar:97          78% complete, 28m 51s elapsed, 7m 45s remaining. 17450 spikes found.
2017-01-30 16:15:38  main:222                Processing chunk <Chunk (45211500/57355200), recording 0>...
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2017-01-30 16:16:09  progressbar:97          80% complete, 29m 22s elapsed, 7m 15s remaining. 17611 spikes found.
2017-01-30 16:16:09  main:222                Processing chunk <Chunk (45979800/57355200), recording 0>...
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2017-01-30 16:16:39  progressbar:97          81% complete, 29m 52s elapsed, 6m 52s remaining. 17832 spikes found.
2017-01-30 16:16:39  main:222                Processing chunk <Chunk (46629900/57355200), recording 0>...
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2017-01-30 16:17:10  progressbar:97          82% complete, 30m 22s elapsed, 6m 27s remaining. 18029 spikes found.
2017-01-30 16:17:10  main:222                Processing chunk <Chunk (47299700/57355200), recording 0>...
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2017-01-30 16:17:40  progressbar:97          83% complete, 30m 53s elapsed, 6m 2s remaining. 18221 spikes found.
2017-01-30 16:17:40  main:222                Processing chunk <Chunk (47969500/57355200), recording 0>...
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2017-01-30 16:18:10  progressbar:97          84% complete, 31m 23s elapsed, 5m 35s remaining. 18364 spikes found.
2017-01-30 16:18:10  main:222                Processing chunk <Chunk (48678700/57355200), recording 0>...
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2017-01-30 16:18:41  progressbar:97          86% complete, 31m 53s elapsed, 5m 10s remaining. 18547 spikes found.
2017-01-30 16:18:41  main:222                Processing chunk <Chunk (49348500/57355200), recording 0>...
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2017-01-30 16:19:11  progressbar:97          87% complete, 32m 24s elapsed, 4m 46s remaining. 18667 spikes found.
2017-01-30 16:19:11  main:222                Processing chunk <Chunk (49998600/57355200), recording 0>...
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2017-01-30 16:19:41  progressbar:97          88% complete, 32m 54s elapsed, 4m 15s remaining. 18860 spikes found.
2017-01-30 16:19:41  main:222                Processing chunk <Chunk (50786600/57355200), recording 0>...
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2017-01-30 16:20:12  progressbar:97          89% complete, 33m 25s elapsed, 3m 43s remaining. 19082 spikes found.
2017-01-30 16:20:12  main:222                Processing chunk <Chunk (51614000/57355200), recording 0>...
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2017-01-30 16:20:43  progressbar:97          91% complete, 33m 55s elapsed, 3m 17s remaining. 19229 spikes found.
2017-01-30 16:20:43  main:222                Processing chunk <Chunk (52283800/57355200), recording 0>...
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2017-01-30 16:21:13  progressbar:97          92% complete, 34m 26s elapsed, 2m 50s remaining. 19452 spikes found.
2017-01-30 16:21:13  main:222                Processing chunk <Chunk (52993000/57355200), recording 0>...
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2017-01-30 16:22:44  progressbar:97          96% complete, 35m 56s elapsed, 1m 24s remaining. 20957 spikes found.
2017-01-30 16:22:44  main:222                Processing chunk <Chunk (55199400/57355200), recording 0>...
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2017-01-30 16:23:14  progressbar:97          97% complete, 36m 27s elapsed, 47s remaining. 21310 spikes found.
2017-01-30 16:23:14  main:222                Processing chunk <Chunk (56125300/57355200), recording 0>...
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2017-01-30 16:23:44  main:222                Processing chunk <Chunk (57031500/57355200), recording 0>...
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