2017-05-24 17:49:03  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT8/20170307_540um_2088um_merge/20170307_540um_2088um_merge.dat>
2017-05-24 17:49:03  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT8/20170307_540um_2088um_merge/8/20170307_540um_2088um_merge_sh8',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '8.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT8/20170307_540um_2088um_merge/20170307_540um_2088um_merge.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-05-24 17:49:53  main:200                Threshold: DoubleThreshold(strong=array([ 212.17743885,  236.07987372,  250.42982943,  254.72494733,
        255.20170986,  256.23735671,  250.81767731,  253.98404457,
        249.93978713,  219.59346394,  225.45814058,  241.96023382,
        258.7705066 ,  224.4420796 ,  229.71366876,  240.59408728,
        282.45084368,  287.86649761,  286.38223631,  199.130967  ,
        272.57250811,  279.95625634,  283.29751783,  193.78655112,
        251.58264429,  224.61122991,  181.84366738,  181.12517646,
        187.5654975 ,  185.26120216,  269.46469626,  270.41101599,
        230.52131116,  236.46352912,  240.06408613,  243.1652659 ,
        243.60248304,  240.85987587,  238.21381311,  226.78208066,
        248.02450574,  245.55443784,  258.16895477,  256.85707908,
        238.03700469,  249.24672697,  251.14982118,  260.31516612,
         91.8841445 ,   93.52633158,   93.51967893,   93.11260385,
         95.69793134,   91.44830638,  224.49963435,  223.21660269,
        225.09430135,   97.21242057,  230.37226875,  216.5618082 ,
        243.01103527,  104.50869206,  240.38565976,  253.78862354,
         96.94639803,  105.35388706,  110.87940254,  109.56577766,
        104.83505887,  105.44494355,  105.09821622,  102.21857759,
        103.18872773,  101.81978057,  100.85110745,   98.98838968,
         97.71737928,   98.11587246,   95.68940756,   96.54930421,
        102.96444437,  101.48722082,  106.41614027,  110.37420493,
        102.78872741,  103.44191795,  103.55634559,  103.12558119,
        103.11670209,  104.71045696,  105.29838497,  107.44124619,
        104.07824571,  105.59892718,   91.57694359,  106.06541865]), weak=array([  94.30108393,  104.92438832,  111.30214642,  113.2110877 ,
        113.42298216,  113.88326965,  111.47452325,  112.88179759,
        111.08434983,   97.59709508,  100.20361804,  107.5378817 ,
        115.00911405,   99.75203538,  102.09496389,  106.93070546,
        125.5337083 ,  127.94066561,  127.28099391,   88.502652  ,
        121.14333694,  124.42500282,  125.91000792,   86.12735605,
        111.81450857,   99.82721329,   80.81940773,   80.50007843,
         83.36244333,   82.33831207,  119.76208723,  120.18267377,
        102.45391607,  105.09490183,  106.69514939,  108.07345151,
        108.26777024,  107.04883372,  105.87280583,  100.79203585,
        110.23311366,  109.13530571,  114.74175768,  114.15870181,
        105.79422431,  110.7763231 ,  111.62214275,  115.69562939,
         40.83739756,   41.56725848,   41.56430175,   41.38337949,
         42.53241393,   40.64369173,   99.77761527,   99.20737897,
        100.04191171,   43.20552025,  102.387675  ,   96.24969253,
        108.00490457,   46.44830758,  106.83807101,  112.7949438 ,
         43.08728801,   46.8239498 ,   49.27973446,   48.69590118,
         46.5933595 ,   46.86441935,   46.71031832,   45.43047893,
         45.86165677,   45.25323581,   44.82271442,   43.99483986,
         43.42994635,   43.60705443,   42.52862558,   42.91080187,
         45.76197528,   45.10543147,   47.29606234,   49.05520219,
         45.68387885,   45.97418575,   46.02504248,   45.83359164,
         45.82964537,   46.53798087,   46.79928221,   47.75166497,
         46.25699809,   46.93285653,   40.70086382,   47.14018607]))
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2017-05-24 18:10:33  progressbar:97          12% complete, 20m 40s elapsed, 2h 29m 38s remaining. 13865 spikes found.
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2017-05-24 18:11:04  progressbar:97          12% complete, 21m 11s elapsed, 2h 30m 36s remaining. 13895 spikes found.
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2017-05-24 18:13:37  progressbar:97          13% complete, 23m 43s elapsed, 2h 35m 8s remaining. 16304 spikes found.
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2017-05-24 18:36:49  progressbar:97          25% complete, 46m 55s elapsed, 2h 16m 26s remaining. 30339 spikes found.
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2017-05-24 18:41:22  progressbar:97          27% complete, 51m 28s elapsed, 2h 18m 23s remaining. 31361 spikes found.
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2017-05-24 18:48:55  progressbar:97          29% complete, 59m 2s elapsed, 2h 20m 40s remaining. 37409 spikes found.
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2017-05-24 18:49:25  progressbar:97          29% complete, 59m 32s elapsed, 2h 20m 56s remaining. 37829 spikes found.
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2017-05-24 18:49:56  progressbar:97          29% complete, 1h 0m 2s elapsed, 2h 21m 4s remaining. 38076 spikes found.
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2017-05-24 18:53:28  progressbar:97          30% complete, 1h 3m 35s elapsed, 2h 21m 40s remaining. 40003 spikes found.
2017-05-24 18:53:28  main:222                Processing chunk <Chunk (163647900/528229440), recording 0>...
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2017-05-24 18:53:59  progressbar:97          31% complete, 1h 4m 6s elapsed, 2h 21m 52s remaining. 40972 spikes found.
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2017-05-24 18:54:30  progressbar:97          31% complete, 1h 4m 36s elapsed, 2h 21m 57s remaining. 41213 spikes found.
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2017-05-24 18:55:00  progressbar:97          31% complete, 1h 5m 7s elapsed, 2h 22m 15s remaining. 42922 spikes found.
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2017-05-24 18:55:30  progressbar:97          31% complete, 1h 5m 37s elapsed, 2h 22m 41s remaining. 44974 spikes found.
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2017-05-24 19:01:04  progressbar:97          33% complete, 1h 11m 11s elapsed, 2h 23m 2s remaining. 51181 spikes found.
2017-05-24 19:01:04  main:222                Processing chunk <Chunk (175527000/528229440), recording 0>...
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2017-05-24 19:01:34  progressbar:97          33% complete, 1h 11m 41s elapsed, 2h 23m 25s remaining. 54020 spikes found.
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2017-05-24 19:02:04  progressbar:97          33% complete, 1h 12m 11s elapsed, 2h 23m 49s remaining. 56800 spikes found.
2017-05-24 19:02:04  main:222                Processing chunk <Chunk (176531700/528229440), recording 0>...
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2017-05-24 19:02:35  progressbar:97          33% complete, 1h 12m 42s elapsed, 2h 24m 6s remaining. 59219 spikes found.
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2017-05-24 19:03:05  progressbar:97          33% complete, 1h 13m 12s elapsed, 2h 24m 5s remaining. 59641 spikes found.
2017-05-24 19:03:05  main:222                Processing chunk <Chunk (177950100/528229440), recording 0>...
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2017-05-24 19:03:36  progressbar:97          33% complete, 1h 13m 42s elapsed, 2h 23m 59s remaining. 59945 spikes found.
2017-05-24 19:03:36  main:222                Processing chunk <Chunk (178856300/528229440), recording 0>...
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2017-05-24 19:13:44  progressbar:97          37% complete, 1h 23m 50s elapsed, 2h 21m 54s remaining. 66862 spikes found.
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2017-05-24 19:34:59  progressbar:97          44% complete, 1h 45m 5s elapsed, 2h 11m 10s remaining. 70563 spikes found.
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2017-05-24 19:35:29  progressbar:97          44% complete, 1h 45m 36s elapsed, 2h 10m 44s remaining. 71070 spikes found.
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2017-05-24 19:58:48  progressbar:97          52% complete, 2h 8m 55s elapsed, 1h 55m 19s remaining. 114689 spikes found.
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2017-05-24 20:00:51  progressbar:97          53% complete, 2h 10m 57s elapsed, 1h 54m 32s remaining. 119232 spikes found.
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2017-05-24 20:01:51  progressbar:97          53% complete, 2h 11m 58s elapsed, 1h 54m 5s remaining. 122807 spikes found.
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2017-05-24 20:11:31  progressbar:97          55% complete, 2h 21m 38s elapsed, 1h 51m 18s remaining. 159208 spikes found.
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2017-05-24 20:12:02  progressbar:97          56% complete, 2h 22m 8s elapsed, 1h 51m 10s remaining. 160864 spikes found.
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2017-05-24 21:23:09  progressbar:97          99% complete, 3h 33m 15s elapsed, 1m 1s remaining. 224720 spikes found.
2017-05-24 21:23:09  main:222                Processing chunk <Chunk (525714200/528229440), recording 0>...
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2017-05-24 21:23:39  progressbar:97          99% complete, 3h 33m 46s elapsed, 42s remaining. 225895 spikes found.
2017-05-24 21:23:39  main:222                Processing chunk <Chunk (526482500/528229440), recording 0>...
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2017-05-24 21:24:09  progressbar:97          99% complete, 3h 34m 16s elapsed, 24s remaining. 226615 spikes found.
2017-05-24 21:24:09  main:222                Processing chunk <Chunk (527231100/528229440), recording 0>...
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2017-05-24 21:24:40  progressbar:97          99% complete, 3h 34m 46s elapsed, 3s remaining. 226674 spikes found.
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2017-05-24 21:24:44  progressbar:97          100% complete, 3h 34m 51s elapsed, 0s remaining. 226679 spikes found.