2017-04-27 12:16:20  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170426_0um_0um_merge/20170426_0um_0um_merge.dat>
2017-04-27 12:16:20  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170426_0um_0um_merge/1/20170426_0um_0um_merge_sh1',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '1.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170426_0um_0um_merge/20170426_0um_0um_merge.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-04-27 12:16:41  main:200                Threshold: DoubleThreshold(strong=array([ 172.05641915,  171.26926653,  182.71656958,  190.53309577,
        184.28456121,  179.02050801,  187.12634795,  172.01663123,
        170.0780716 ,  164.9405266 ,  167.71843252,  173.56976457,
        168.65405376,  175.88335018,  183.11695809,  175.19676196,
        237.81343794,  236.49471521,  167.38011066,  165.31879783,
        167.40023278,  163.40807648,  164.67025402,  170.41400109,
        178.60393566,  237.36915863,  200.57106654,  172.63449344,
        190.75695896,  239.35289012,  237.18500393,  232.77697577,
        233.95860366,  234.21799101,  237.34984503,  244.88732568,
        250.46653024,  244.56717087,  245.68159236,  246.07371259,
        240.12401659,  241.21544167,  255.79305581,  269.42788796,
        262.21996447,  254.1133659 ,  261.1026871 ,  255.44504249,
        233.28816501,  229.21694794,  220.72435399,  226.98037939,
        226.89160215,  229.85595036,  243.46095463,  247.96975243,
        239.12460827,  234.92909691,  245.47336419,  238.32473771,
        241.73150234,  251.62194476,  251.99515864,  249.04266828,
        241.97685426,  240.02272534,  241.50668264,  241.33571358,
        246.64403737,  255.62388747,  242.06193731,  231.57498385,
        232.02432008,  231.94948831,  241.29113728,  222.54190365,
        233.0596618 ,  217.29577471,  221.14622477,  234.98970205,
        251.91055793,  254.6133972 ,  270.59385064,  274.94343575,
        259.13411508,  261.20734705,  240.9572095 ,  244.44998809,
        249.84821303,  245.07288386,  271.48772893,  248.79641656,
        258.21832237,  268.94167138,  218.75791709,  240.76579223]), weak=array([  76.46951962,   76.11967401,   81.20736426,   84.6813759 ,
         81.90424942,   79.56467023,   83.16726575,   76.4518361 ,
         75.59025404,   73.30690071,   74.54152556,   77.14211759,
         74.95735722,   78.17037786,   81.38531471,   77.86522754,
        105.69486131,  105.10876232,   74.39116029,   73.47502126,
         74.40010346,   72.62581177,   73.18677957,   75.73955604,
         79.37952696,  105.49740384,   89.14269624,   76.72644153,
         84.78087065,  106.37906227,  105.4155573 ,  103.45643367,
        103.98160163,  104.09688489,  105.48882001,  108.83881141,
        111.31845789,  108.69652039,  109.19181883,  109.36609448,
        106.72178515,  107.20686296,  113.68580258,  119.74572798,
        116.54220643,  112.93927373,  116.04563871,  113.53112999,
        103.68362889,  101.87419908,   98.09971288,  100.88016862,
        100.84071207,  102.15820016,  108.20486872,  110.20877886,
        106.27760368,  104.41293196,  109.09927297,  105.92210565,
        107.43622326,  111.83197545,  111.99784828,  110.68563034,
        107.54526856,  106.67676682,  107.33630339,  107.26031715,
        109.61957216,  113.61061665,  107.58308325,  102.92221504,
        103.12192003,  103.08866147,  107.24050546,   98.90751273,
        103.58207191,   96.57589987,   98.28721101,  104.43986758,
        111.96024797,  113.16150987,  120.26393362,  122.19708256,
        115.17071781,  116.09215424,  107.09209311,  108.64443915,
        111.04365024,  108.92128172,  120.66121286,  110.57618514,
        114.76369883,  119.52963172,   97.22574093,  107.00701877]))
2017-04-27 12:16:41  main:222                Processing chunk <Chunk (0/298573200), recording 0>...
2017-04-27 12:16:41  progressbar:97          0% complete, 0s elapsed. 36 spikes found.
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2017-04-27 12:17:12  progressbar:97          0% complete, 31s elapsed, 3h 33m 44s remaining. 1495 spikes found.
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2017-04-27 12:17:42  progressbar:97          0% complete, 1m 1s elapsed, 3h 15m 40s remaining. 3297 spikes found.
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2017-04-27 12:18:13  progressbar:97          0% complete, 1m 32s elapsed, 3h 0m 1s remaining. 5117 spikes found.
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2017-04-27 12:31:53  progressbar:97          9% complete, 15m 12s elapsed, 2h 22m 48s remaining. 59566 spikes found.
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2017-04-27 12:32:23  progressbar:97          9% complete, 15m 42s elapsed, 2h 21m 46s remaining. 62823 spikes found.
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2017-04-27 12:53:04  progressbar:97          25% complete, 36m 23s elapsed, 1h 43m 48s remaining. 122656 spikes found.
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2017-04-27 12:55:07  progressbar:97          26% complete, 38m 26s elapsed, 1h 44m 22s remaining. 129874 spikes found.
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2017-04-27 12:55:38  progressbar:97          27% complete, 38m 57s elapsed, 1h 44m 32s remaining. 131708 spikes found.
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2017-04-27 12:56:08  progressbar:97          27% complete, 39m 27s elapsed, 1h 44m 42s remaining. 133514 spikes found.
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2017-04-27 13:00:41  progressbar:97          30% complete, 44m 0s elapsed, 1h 38m 59s remaining. 156598 spikes found.
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2017-04-27 13:01:12  progressbar:97          31% complete, 44m 30s elapsed, 1h 38m 54s remaining. 158678 spikes found.
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2017-04-27 13:01:42  progressbar:97          31% complete, 45m 1s elapsed, 1h 39m 1s remaining. 160325 spikes found.
2017-04-27 13:01:42  main:222                Processing chunk <Chunk (93318900/298573200), recording 0>...
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2017-04-27 13:02:13  progressbar:97          31% complete, 45m 31s elapsed, 1h 39m 8s remaining. 162163 spikes found.
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2017-04-27 13:02:43  progressbar:97          31% complete, 46m 2s elapsed, 1h 39m 7s remaining. 163928 spikes found.
2017-04-27 13:02:43  main:222                Processing chunk <Chunk (94697900/298573200), recording 0>...
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2017-04-27 13:03:13  progressbar:97          31% complete, 46m 32s elapsed, 1h 39m 6s remaining. 165781 spikes found.
2017-04-27 13:03:13  main:222                Processing chunk <Chunk (95407100/298573200), recording 0>...
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2017-04-27 13:30:31  progressbar:97          52% complete, 1h 13m 50s elapsed, 1h 7m 20s remaining. 234819 spikes found.
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2017-04-27 13:32:33  progressbar:97          53% complete, 1h 15m 52s elapsed, 1h 5m 45s remaining. 238981 spikes found.
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2017-04-27 14:10:30  progressbar:97          78% complete, 1h 53m 49s elapsed, 30m 51s remaining. 341988 spikes found.
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2017-04-27 14:11:31  progressbar:97          79% complete, 1h 54m 50s elapsed, 30m 28s remaining. 347057 spikes found.
2017-04-27 14:11:31  main:222                Processing chunk <Chunk (235946900/298573200), recording 0>...
2017-04-27 14:11:32  main:222                Processing chunk <Chunk (235966600/298573200), recording 0>...
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2017-04-27 14:12:02  progressbar:97          79% complete, 1h 55m 21s elapsed, 30m 21s remaining. 349631 spikes found.
2017-04-27 14:12:02  main:222                Processing chunk <Chunk (236360600/298573200), recording 0>...
2017-04-27 14:12:03  main:222                Processing chunk <Chunk (236380300/298573200), recording 0>...
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2017-04-27 14:12:06  main:222                Processing chunk <Chunk (236439400/298573200), recording 0>...
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2017-04-27 14:12:34  progressbar:97          79% complete, 1h 55m 53s elapsed, 30m 15s remaining. 352324 spikes found.
2017-04-27 14:12:34  main:222                Processing chunk <Chunk (236754600/298573200), recording 0>...
2017-04-27 14:12:36  main:222                Processing chunk <Chunk (236774300/298573200), recording 0>...
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2017-04-27 14:12:40  main:222                Processing chunk <Chunk (236813700/298573200), recording 0>...
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2017-04-27 14:12:48  main:222                Processing chunk <Chunk (236951600/298573200), recording 0>...
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2017-04-27 14:12:54  main:222                Processing chunk <Chunk (237010700/298573200), recording 0>...
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2017-04-27 14:13:05  progressbar:97          79% complete, 1h 56m 24s elapsed, 30m 10s remaining. 354950 spikes found.
2017-04-27 14:13:05  main:222                Processing chunk <Chunk (237109200/298573200), recording 0>...
2017-04-27 14:13:07  main:222                Processing chunk <Chunk (237128900/298573200), recording 0>...
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2017-04-27 14:13:18  main:222                Processing chunk <Chunk (237385000/298573200), recording 0>...
2017-04-27 14:13:19  main:222                Processing chunk <Chunk (237404700/298573200), recording 0>...
2017-04-27 14:13:20  main:222                Processing chunk <Chunk (237424400/298573200), recording 0>...
2017-04-27 14:13:21  main:222                Processing chunk <Chunk (237444100/298573200), recording 0>...
2017-04-27 14:13:21  main:222                Processing chunk <Chunk (237463800/298573200), recording 0>...
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2017-04-27 14:13:23  main:222                Processing chunk <Chunk (237503200/298573200), recording 0>...
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2017-04-27 14:13:24  main:222                Processing chunk <Chunk (237542600/298573200), recording 0>...
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2017-04-27 14:13:35  main:222                Processing chunk <Chunk (237818400/298573200), recording 0>...
2017-04-27 14:13:36  progressbar:97          79% complete, 1h 56m 55s elapsed, 29m 51s remaining. 356532 spikes found.
2017-04-27 14:13:36  main:222                Processing chunk <Chunk (237838100/298573200), recording 0>...
2017-04-27 14:13:36  main:222                Processing chunk <Chunk (237857800/298573200), recording 0>...
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2017-04-27 14:13:39  main:222                Processing chunk <Chunk (237936600/298573200), recording 0>...
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2017-04-27 14:13:42  main:222                Processing chunk <Chunk (237995700/298573200), recording 0>...
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2017-04-27 14:13:44  main:222                Processing chunk <Chunk (238035100/298573200), recording 0>...
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2017-04-27 14:13:48  main:222                Processing chunk <Chunk (238133600/298573200), recording 0>...
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2017-04-27 14:13:53  main:222                Processing chunk <Chunk (238232100/298573200), recording 0>...
2017-04-27 14:13:54  main:222                Processing chunk <Chunk (238251800/298573200), recording 0>...
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2017-04-27 14:14:02  main:222                Processing chunk <Chunk (238310900/298573200), recording 0>...
2017-04-27 14:14:04  main:222                Processing chunk <Chunk (238330600/298573200), recording 0>...
2017-04-27 14:14:06  progressbar:97          79% complete, 1h 57m 25s elapsed, 29m 40s remaining. 358737 spikes found.
2017-04-27 14:14:06  main:222                Processing chunk <Chunk (238350300/298573200), recording 0>...
2017-04-27 14:14:07  main:222                Processing chunk <Chunk (238370000/298573200), recording 0>...
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2017-04-27 14:14:12  main:222                Processing chunk <Chunk (238507900/298573200), recording 0>...
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2017-04-27 14:14:16  main:222                Processing chunk <Chunk (238567000/298573200), recording 0>...
2017-04-27 14:14:19  main:222                Processing chunk <Chunk (238586700/298573200), recording 0>...
2017-04-27 14:14:20  main:222                Processing chunk <Chunk (238606400/298573200), recording 0>...
2017-04-27 14:14:23  main:222                Processing chunk <Chunk (238626100/298573200), recording 0>...
2017-04-27 14:14:24  main:222                Processing chunk <Chunk (238645800/298573200), recording 0>...
2017-04-27 14:14:27  main:222                Processing chunk <Chunk (238665500/298573200), recording 0>...
2017-04-27 14:14:30  main:222                Processing chunk <Chunk (238685200/298573200), recording 0>...
2017-04-27 14:14:34  main:222                Processing chunk <Chunk (238704900/298573200), recording 0>...
2017-04-27 14:14:36  progressbar:97          79% complete, 1h 57m 55s elapsed, 29m 33s remaining. 361144 spikes found.
2017-04-27 14:14:36  main:222                Processing chunk <Chunk (238724600/298573200), recording 0>...
2017-04-27 14:14:38  main:222                Processing chunk <Chunk (238744300/298573200), recording 0>...
2017-04-27 14:14:40  main:222                Processing chunk <Chunk (238764000/298573200), recording 0>...
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2017-04-27 14:14:44  main:222                Processing chunk <Chunk (238842800/298573200), recording 0>...
2017-04-27 14:14:46  main:222                Processing chunk <Chunk (238862500/298573200), recording 0>...
2017-04-27 14:14:48  main:222                Processing chunk <Chunk (238882200/298573200), recording 0>...
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2017-04-27 14:14:57  main:222                Processing chunk <Chunk (238941300/298573200), recording 0>...
2017-04-27 14:15:00  main:222                Processing chunk <Chunk (238961000/298573200), recording 0>...
2017-04-27 14:15:01  main:222                Processing chunk <Chunk (238980700/298573200), recording 0>...
2017-04-27 14:15:02  main:222                Processing chunk <Chunk (239000400/298573200), recording 0>...
2017-04-27 14:15:03  main:222                Processing chunk <Chunk (239020100/298573200), recording 0>...
2017-04-27 14:15:04  main:222                Processing chunk <Chunk (239039800/298573200), recording 0>...
2017-04-27 14:15:05  main:222                Processing chunk <Chunk (239059500/298573200), recording 0>...
2017-04-27 14:15:06  main:222                Processing chunk <Chunk (239079200/298573200), recording 0>...
2017-04-27 14:15:07  progressbar:97          80% complete, 1h 58m 26s elapsed, 29m 27s remaining. 363572 spikes found.
2017-04-27 14:15:07  main:222                Processing chunk <Chunk (239098900/298573200), recording 0>...
2017-04-27 14:15:08  main:222                Processing chunk <Chunk (239118600/298573200), recording 0>...
2017-04-27 14:15:08  main:222                Processing chunk <Chunk (239138300/298573200), recording 0>...
2017-04-27 14:15:09  main:222                Processing chunk <Chunk (239158000/298573200), recording 0>...
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2017-04-27 14:15:10  main:222                Processing chunk <Chunk (239197400/298573200), recording 0>...
2017-04-27 14:15:11  main:222                Processing chunk <Chunk (239217100/298573200), recording 0>...
2017-04-27 14:15:12  main:222                Processing chunk <Chunk (239236800/298573200), recording 0>...
2017-04-27 14:15:13  main:222                Processing chunk <Chunk (239256500/298573200), recording 0>...
2017-04-27 14:15:13  main:222                Processing chunk <Chunk (239276200/298573200), recording 0>...
2017-04-27 14:15:14  main:222                Processing chunk <Chunk (239295900/298573200), recording 0>...
2017-04-27 14:15:15  main:222                Processing chunk <Chunk (239315600/298573200), recording 0>...
2017-04-27 14:15:16  main:222                Processing chunk <Chunk (239335300/298573200), recording 0>...
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2017-04-27 14:15:18  main:222                Processing chunk <Chunk (239374700/298573200), recording 0>...
2017-04-27 14:15:18  main:222                Processing chunk <Chunk (239394400/298573200), recording 0>...
2017-04-27 14:15:19  main:222                Processing chunk <Chunk (239414100/298573200), recording 0>...
2017-04-27 14:15:20  main:222                Processing chunk <Chunk (239433800/298573200), recording 0>...
2017-04-27 14:15:21  main:222                Processing chunk <Chunk (239453500/298573200), recording 0>...
2017-04-27 14:15:24  main:222                Processing chunk <Chunk (239473200/298573200), recording 0>...
2017-04-27 14:15:26  main:222                Processing chunk <Chunk (239492900/298573200), recording 0>...
2017-04-27 14:15:30  main:222                Processing chunk <Chunk (239512600/298573200), recording 0>...
2017-04-27 14:15:31  main:222                Processing chunk <Chunk (239532300/298573200), recording 0>...
2017-04-27 14:15:33  main:222                Processing chunk <Chunk (239552000/298573200), recording 0>...
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2017-04-27 14:15:36  main:222                Processing chunk <Chunk (239591400/298573200), recording 0>...
2017-04-27 14:15:38  progressbar:97          80% complete, 1h 58m 57s elapsed, 29m 16s remaining. 365530 spikes found.
2017-04-27 14:15:38  main:222                Processing chunk <Chunk (239611100/298573200), recording 0>...
2017-04-27 14:15:41  main:222                Processing chunk <Chunk (239630800/298573200), recording 0>...
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2017-04-27 14:15:46  main:222                Processing chunk <Chunk (239670200/298573200), recording 0>...
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2017-04-27 14:15:56  main:222                Processing chunk <Chunk (239788400/298573200), recording 0>...
2017-04-27 14:15:57  main:222                Processing chunk <Chunk (239808100/298573200), recording 0>...
2017-04-27 14:15:58  main:222                Processing chunk <Chunk (239827800/298573200), recording 0>...
2017-04-27 14:15:59  main:222                Processing chunk <Chunk (239847500/298573200), recording 0>...
2017-04-27 14:16:00  main:222                Processing chunk <Chunk (239867200/298573200), recording 0>...
2017-04-27 14:16:00  main:222                Processing chunk <Chunk (239886900/298573200), recording 0>...
2017-04-27 14:16:01  main:222                Processing chunk <Chunk (239906600/298573200), recording 0>...
2017-04-27 14:16:01  main:222                Processing chunk <Chunk (239926300/298573200), recording 0>...
2017-04-27 14:16:02  main:222                Processing chunk <Chunk (239946000/298573200), recording 0>...
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2017-04-27 14:16:08  progressbar:97          80% complete, 1h 59m 27s elapsed, 29m 4s remaining. 367462 spikes found.
2017-04-27 14:16:08  main:222                Processing chunk <Chunk (240123300/298573200), recording 0>...
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2017-04-27 14:16:40  progressbar:97          80% complete, 1h 59m 59s elapsed, 28m 48s remaining. 369241 spikes found.
2017-04-27 14:16:40  main:222                Processing chunk <Chunk (240773400/298573200), recording 0>...
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2017-04-27 14:17:11  progressbar:97          80% complete, 2h 0m 30s elapsed, 28m 36s remaining. 371311 spikes found.
2017-04-27 14:17:11  main:222                Processing chunk <Chunk (241285600/298573200), recording 0>...
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2017-04-27 14:17:42  progressbar:97          81% complete, 2h 1m 1s elapsed, 28m 18s remaining. 372739 spikes found.
2017-04-27 14:17:42  main:222                Processing chunk <Chunk (241975100/298573200), recording 0>...
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2017-04-27 14:18:12  progressbar:97          81% complete, 2h 1m 31s elapsed, 28m 7s remaining. 375192 spikes found.
2017-04-27 14:18:12  main:222                Processing chunk <Chunk (242447900/298573200), recording 0>...
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2017-04-27 14:18:43  progressbar:97          81% complete, 2h 2m 2s elapsed, 27m 43s remaining. 376366 spikes found.
2017-04-27 14:18:43  main:222                Processing chunk <Chunk (243295000/298573200), recording 0>...
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2017-04-27 14:19:16  progressbar:97          81% complete, 2h 2m 35s elapsed, 27m 24s remaining. 377977 spikes found.
2017-04-27 14:19:16  main:222                Processing chunk <Chunk (244023900/298573200), recording 0>...
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2017-04-27 14:25:50  progressbar:97          85% complete, 2h 9m 9s elapsed, 22m 47s remaining. 394783 spikes found.
2017-04-27 14:25:50  main:222                Processing chunk <Chunk (253795100/298573200), recording 0>...
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2017-04-27 14:26:21  progressbar:97          85% complete, 2h 9m 40s elapsed, 22m 27s remaining. 396310 spikes found.
2017-04-27 14:26:21  main:222                Processing chunk <Chunk (254504300/298573200), recording 0>...
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2017-04-27 14:26:52  progressbar:97          85% complete, 2h 10m 11s elapsed, 22m 9s remaining. 397865 spikes found.
2017-04-27 14:26:52  main:222                Processing chunk <Chunk (255134700/298573200), recording 0>...
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2017-04-27 14:27:23  progressbar:97          85% complete, 2h 10m 41s elapsed, 21m 51s remaining. 399215 spikes found.
2017-04-27 14:27:23  main:222                Processing chunk <Chunk (255784800/298573200), recording 0>...
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2017-04-27 14:27:53  progressbar:97          85% complete, 2h 11m 12s elapsed, 21m 34s remaining. 400785 spikes found.
2017-04-27 14:27:53  main:222                Processing chunk <Chunk (256415200/298573200), recording 0>...
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2017-04-27 14:28:23  progressbar:97          86% complete, 2h 11m 42s elapsed, 21m 14s remaining. 402033 spikes found.
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2017-04-27 14:34:58  progressbar:97          90% complete, 2h 18m 17s elapsed, 15m 10s remaining. 418013 spikes found.
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2017-04-27 14:35:28  progressbar:97          90% complete, 2h 18m 47s elapsed, 14m 38s remaining. 419020 spikes found.
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2017-04-27 14:44:33  progressbar:97          96% complete, 2h 27m 52s elapsed, 4m 43s remaining. 440433 spikes found.
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2017-04-27 14:45:04  progressbar:97          97% complete, 2h 28m 23s elapsed, 4m 23s remaining. 441515 spikes found.
2017-04-27 14:45:04  main:222                Processing chunk <Chunk (290003700/298573200), recording 0>...
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2017-04-27 14:45:34  progressbar:97          97% complete, 2h 28m 53s elapsed, 4m 6s remaining. 442443 spikes found.
2017-04-27 14:45:34  main:222                Processing chunk <Chunk (290555300/298573200), recording 0>...
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2017-04-27 14:46:04  progressbar:97          97% complete, 2h 29m 23s elapsed, 3m 46s remaining. 443482 spikes found.
2017-04-27 14:46:04  main:222                Processing chunk <Chunk (291225100/298573200), recording 0>...
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2017-04-27 14:46:34  progressbar:97          97% complete, 2h 29m 53s elapsed, 3m 26s remaining. 444806 spikes found.
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2017-04-27 14:49:06  progressbar:97          99% complete, 2h 32m 25s elapsed, 58s remaining. 450616 spikes found.
2017-04-27 14:49:06  main:222                Processing chunk <Chunk (296662300/298573200), recording 0>...
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2017-04-27 14:49:36  progressbar:97          99% complete, 2h 32m 55s elapsed, 30s remaining. 451893 spikes found.
2017-04-27 14:49:36  main:222                Processing chunk <Chunk (297588200/298573200), recording 0>...
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2017-04-27 14:50:07  progressbar:97          99% complete, 2h 33m 25s elapsed, 10s remaining. 452487 spikes found.
2017-04-27 14:50:07  main:222                Processing chunk <Chunk (298238300/298573200), recording 0>...
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2017-04-27 14:50:21  progressbar:97          100% complete, 2h 33m 40s elapsed, 0s remaining. 452770 spikes found.