2017-04-30 14:56:00  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170429_0um_0um_merge/20170429_0um_0um_merge.dat>
2017-04-30 14:56:00  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170429_0um_0um_merge/3/20170429_0um_0um_merge_sh3',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '3.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170429_0um_0um_merge/20170429_0um_0um_merge.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-04-30 14:56:20  main:200                Threshold: DoubleThreshold(strong=array([ 247.72587981,  251.96017434,  240.79039536,  186.02024279,
        239.95270773,  246.22727583,  262.64752872,  233.74502571,
        223.46611604,  233.52812231,  238.32678856,  241.79118478,
        236.43467206,  234.43646071,  242.11390904,  247.18373278,
        247.15691457,  250.1740977 ,  232.93551851,  234.88206723,
        242.15597372,  215.63555978,  169.16325311,  229.19220281,
        230.53575385,  236.79704971,  238.36988852,  228.33020705,
        243.42915341,  242.81793246,  250.92397245,  242.45996806,
        247.35137953,  251.51798528,  255.85301244,  278.39684601,
        286.88101766,  279.26386345,  262.97866505,  251.46810964,
        265.441845  ,  270.99308015,  278.66773029,  276.67487531,
        277.82969759,  267.40404503,  270.81425483,  268.91245433,
        258.57086077,  282.03123143,  250.76267113,  277.02031462,
        235.48602952,  267.48078274,  243.42099984,  242.77366859,
        256.56899981,  251.95079714,  275.2277315 ,  271.45352188,
        260.55988146,  251.0172742 ,  243.65946775,  255.6253931 ,
        268.1531032 ,  279.45211555,  277.80798454,  252.50827991,
        252.04305425,  243.85031321,  252.88765337,  265.23438827,
        274.98460335,  263.42707521,  242.16794824,  259.26623087,
        254.8025568 ,  271.34487205,  256.71750433,  251.43854023,
        280.36198735,  288.53623729,  252.3887414 ,  277.01733897,
        256.43549919,  247.72026956,  286.55877344,  270.86074923,
        286.26322401,  273.01055655,  252.27736167,  274.44718182,
        254.56814437,  243.57827421,  272.41422381,  272.16059325]), weak=array([ 110.10039103,  111.98229971,  107.01795349,   82.67566346,
        106.64564788,  109.43434481,  116.73223499,  103.88667809,
         99.31827379,  103.79027658,  105.92301714,  107.46274879,
        105.08207647,  104.19398254,  107.6061818 ,  109.85943679,
        109.84751759,  111.18848787,  103.52689712,  104.39202988,
        107.62487721,   95.83802657,   75.18366805,  101.86320125,
        102.46033504,  105.2431332 ,  105.94217268,  101.48009202,
        108.19073485,  107.9190811 ,  111.52176554,  107.7599858 ,
        109.93394646,  111.78577124,  113.71244997,  123.73193156,
        127.50267452,  124.11727265,  116.87940669,  111.76360428,
        117.97415333,  120.44136896,  123.85232458,  122.96661125,
        123.4798656 ,  118.84624224,  120.36189104,  119.51664637,
        114.92038256,  125.34721397,  111.45007606,  123.12013983,
        104.66045757,  118.88034788,  108.18711104,  107.89940826,
        114.03066658,  111.97813206,  122.32343622,  120.64600973,
        115.80439176,  111.56323298,  108.29309678,  113.61128582,
        119.17915698,  124.20094024,  123.47021535,  112.22590218,
        112.01913522,  108.37791698,  112.39451261,  117.88195034,
        122.21537926,  117.07870009,  107.63019922,  115.22943594,
        113.2455808 ,  120.59772091,  114.09666859,  111.75046232,
        124.60532771,  128.23832768,  112.17277396,  123.11881732,
        113.97133297,  110.09789758,  127.35945486,  120.38255522,
        127.22809956,  121.33802514,  112.12327186,  121.97652525,
        113.1413975 ,  108.25701076,  121.07298836,  120.96026367]))
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2017-04-30 14:56:20  progressbar:97          0% complete, 0s elapsed. 23 spikes found.
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2017-04-30 14:56:51  progressbar:97          0% complete, 30s elapsed, 2h 10m 19s remaining. 2203 spikes found.
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2017-04-30 15:44:06  progressbar:97          44% complete, 47m 45s elapsed, 59m 48s remaining. 134870 spikes found.
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2017-04-30 15:49:08  progressbar:97          47% complete, 52m 48s elapsed, 58m 55s remaining. 155811 spikes found.
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2017-04-30 15:49:38  progressbar:97          47% complete, 53m 18s elapsed, 59m 2s remaining. 159453 spikes found.
2017-04-30 15:49:38  main:222                Processing chunk <Chunk (244555800/515426400), recording 0>...
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2017-04-30 15:50:09  progressbar:97          47% complete, 53m 48s elapsed, 59m 16s remaining. 163018 spikes found.
2017-04-30 15:50:09  main:222                Processing chunk <Chunk (245245300/515426400), recording 0>...
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2017-04-30 15:50:40  progressbar:97          47% complete, 54m 19s elapsed, 59m 31s remaining. 167395 spikes found.
2017-04-30 15:50:40  main:222                Processing chunk <Chunk (245974200/515426400), recording 0>...
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2017-04-30 15:51:11  progressbar:97          47% complete, 54m 51s elapsed, 59m 47s remaining. 171399 spikes found.
2017-04-30 15:51:11  main:222                Processing chunk <Chunk (246624300/515426400), recording 0>...
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2017-04-30 15:51:42  progressbar:97          47% complete, 55m 21s elapsed, 1h 0m 4s remaining. 176088 spikes found.
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2017-04-30 15:53:45  progressbar:97          48% complete, 57m 25s elapsed, 1h 1m 8s remaining. 195066 spikes found.
2017-04-30 15:53:45  main:222                Processing chunk <Chunk (249638400/515426400), recording 0>...
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2017-04-30 15:54:16  progressbar:97          48% complete, 57m 55s elapsed, 1h 1m 24s remaining. 200134 spikes found.
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2017-04-30 15:54:46  progressbar:97          48% complete, 58m 26s elapsed, 1h 1m 38s remaining. 204239 spikes found.
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2017-04-30 15:55:16  progressbar:97          48% complete, 58m 56s elapsed, 1h 1m 49s remaining. 208662 spikes found.
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2017-04-30 15:55:47  progressbar:97          48% complete, 59m 26s elapsed, 1h 2m 3s remaining. 213592 spikes found.
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2017-04-30 15:56:17  progressbar:97          49% complete, 59m 57s elapsed, 1h 2m 18s remaining. 218300 spikes found.
2017-04-30 15:56:17  main:222                Processing chunk <Chunk (252731300/515426400), recording 0>...
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2017-04-30 15:56:47  progressbar:97          49% complete, 1h 0m 27s elapsed, 1h 2m 32s remaining. 223076 spikes found.
2017-04-30 15:56:47  main:222                Processing chunk <Chunk (253342000/515426400), recording 0>...
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2017-04-30 15:57:18  progressbar:97          49% complete, 1h 0m 57s elapsed, 1h 2m 44s remaining. 227141 spikes found.
2017-04-30 15:57:18  main:222                Processing chunk <Chunk (254011800/515426400), recording 0>...
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2017-04-30 15:57:49  progressbar:97          49% complete, 1h 1m 29s elapsed, 1h 2m 56s remaining. 231701 spikes found.
2017-04-30 15:57:49  main:222                Processing chunk <Chunk (254701300/515426400), recording 0>...
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2017-04-30 15:58:19  progressbar:97          49% complete, 1h 1m 59s elapsed, 1h 3m 8s remaining. 235847 spikes found.
2017-04-30 15:58:19  main:222                Processing chunk <Chunk (255331700/515426400), recording 0>...
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2017-04-30 16:00:52  progressbar:97          50% complete, 1h 4m 32s elapsed, 1h 3m 41s remaining. 257789 spikes found.
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2017-04-30 16:06:29  progressbar:97          52% complete, 1h 10m 9s elapsed, 1h 4m 7s remaining. 317991 spikes found.
2017-04-30 16:06:29  main:222                Processing chunk <Chunk (269279300/515426400), recording 0>...
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2017-04-30 16:06:59  progressbar:97          52% complete, 1h 10m 39s elapsed, 1h 4m 13s remaining. 323357 spikes found.
2017-04-30 16:06:59  main:222                Processing chunk <Chunk (269988500/515426400), recording 0>...
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2017-04-30 16:07:30  progressbar:97          52% complete, 1h 11m 9s elapsed, 1h 4m 18s remaining. 328886 spikes found.
2017-04-30 16:07:30  main:222                Processing chunk <Chunk (270737100/515426400), recording 0>...
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2017-04-30 16:08:00  progressbar:97          52% complete, 1h 11m 40s elapsed, 1h 4m 11s remaining. 333750 spikes found.
2017-04-30 16:08:00  main:222                Processing chunk <Chunk (271879700/515426400), recording 0>...
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2017-04-30 16:08:31  progressbar:97          52% complete, 1h 12m 10s elapsed, 1h 4m 6s remaining. 338525 spikes found.
2017-04-30 16:08:31  main:222                Processing chunk <Chunk (272982900/515426400), recording 0>...
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2017-04-30 17:07:39  progressbar:97          86% complete, 2h 11m 18s elapsed, 19m 51s remaining. 489563 spikes found.
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2017-04-30 17:31:54  progressbar:97          99% complete, 2h 35m 34s elapsed, 0s remaining. 525266 spikes found.
2017-04-30 17:31:54  main:222                Processing chunk <Chunk (515371700/515426400), recording 0>...
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2017-04-30 17:31:55  progressbar:97          100% complete, 2h 35m 35s elapsed, 0s remaining. 525275 spikes found.