2017-06-22 21:42:25  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170506_468um_36um_170506_111835/20170506_468um_36um_170506_111835.dat>
2017-06-22 21:42:25  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170506_468um_36um_170506_111835/5/20170506_468um_36um_170506_111835_sh5',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 5,
 'pca_nwaveforms_max': 20000,
 'prb_file': '5.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170506_468um_36um_170506_111835/20170506_468um_36um_170506_111835.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 5.0,
 'threshold_weak_std_factor': 2.5,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-06-22 21:43:09  main:200                Threshold: DoubleThreshold(strong=array([ 290.95014486,  293.93369923,  302.78161716,  181.0368355 ,
        303.97261618,  313.64726565,  303.78652814,  275.53090052,
        289.4151892 ,  284.24633366,  282.69188954,  286.0888843 ,
        284.1166717 ,  297.41718344,  297.36030104,  305.76159664,
        290.73341747,  288.76999968,  264.932764  ,  261.91033521,
        276.43241846,  273.93616925,  288.75902526,  271.18343923,
        251.29253657,  287.0526081 ,  299.72383224,  291.05377064,
        253.96714553,  265.12499945,  267.11414013,  276.52249409,
        256.8036795 ,  273.98473477,  286.52672206,  294.33913031,
        299.35487159,  294.9514665 ,  297.25918128,  284.56783634,
        290.32702507,  295.83688617,  297.90447243,  304.79839069,
        300.38927044,  292.5186561 ,  298.75219487,  296.12289307,
        265.84026303,  283.41136788,  267.50217036,  278.16536894,
        250.11097296,  285.56986017,  218.37338563,  221.22771164,
        219.97436906,  280.09576335,  277.20863202,  244.02771041,
        217.83538023,  258.73606883,  231.61021561,  225.38949973,
        334.53538155,  303.24841529,  284.94174111,  294.25747406,
        274.0169985 ,  266.14607046,  276.24727661,  283.20581398,
        277.8524096 ,  299.50205008,  306.40844901,  270.38995124,
        293.52514038,  284.48461372,  267.85735151,  271.69777747,
        300.62712889,  319.67460309,  254.86593707,  289.62628222,
        276.19835009,  246.24982975,  305.60821909,  295.40233596,
        284.22483665,  305.09124171,  282.28576477,  279.33172666,
        277.24744971,  271.19749307,  276.17727489,  276.0759283 ]), weak=array([ 145.47507243,  146.96684961,  151.39080858,   90.51841775,
        151.98630809,  156.82363283,  151.89326407,  137.76545026,
        144.7075946 ,  142.12316683,  141.34594477,  143.04444215,
        142.05833585,  148.70859172,  148.68015052,  152.88079832,
        145.36670873,  144.38499984,  132.466382  ,  130.9551676 ,
        138.21620923,  136.96808463,  144.37951263,  135.59171961,
        125.64626828,  143.52630405,  149.86191612,  145.52688532,
        126.98357276,  132.56249973,  133.55707006,  138.26124704,
        128.40183975,  136.99236739,  143.26336103,  147.16956515,
        149.67743579,  147.47573325,  148.62959064,  142.28391817,
        145.16351254,  147.91844308,  148.95223621,  152.39919535,
        150.19463522,  146.25932805,  149.37609744,  148.06144653,
        132.92013152,  141.70568394,  133.75108518,  139.08268447,
        125.05548648,  142.78493009,  109.18669282,  110.61385582,
        109.98718453,  140.04788168,  138.60431601,  122.0138552 ,
        108.91769012,  129.36803441,  115.8051078 ,  112.69474986,
        167.26769078,  151.62420764,  142.47087055,  147.12873703,
        137.00849925,  133.07303523,  138.1236383 ,  141.60290699,
        138.9262048 ,  149.75102504,  153.2042245 ,  135.19497562,
        146.76257019,  142.24230686,  133.92867576,  135.84888874,
        150.31356444,  159.83730155,  127.43296854,  144.81314111,
        138.09917505,  123.12491488,  152.80410954,  147.70116798,
        142.11241832,  152.54562086,  141.14288238,  139.66586333,
        138.62372486,  135.59874654,  138.08863745,  138.03796415]))
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2017-06-22 21:43:40  progressbar:97          0% complete, 30s elapsed, 3h 42m 40s remaining. 743 spikes found.
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2017-06-22 21:44:10  progressbar:97          0% complete, 1m 1s elapsed, 3h 56m 49s remaining. 1708 spikes found.
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2017-06-22 21:44:40  progressbar:97          0% complete, 1m 31s elapsed, 4h 22m 57s remaining. 3100 spikes found.
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2017-06-22 22:03:56  progressbar:97          7% complete, 20m 46s elapsed, 4h 3m 56s remaining. 41758 spikes found.
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2017-06-22 22:04:26  progressbar:97          7% complete, 21m 17s elapsed, 4h 5m 10s remaining. 42616 spikes found.
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2017-06-22 23:54:04  progressbar:97          51% complete, 2h 10m 55s elapsed, 2h 1m 4s remaining. 184445 spikes found.
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2017-06-22 23:55:04  main:222                Processing chunk <Chunk (276016700/529278480), recording 0>...
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2017-06-22 23:55:35  progressbar:97          52% complete, 2h 12m 25s elapsed, 2h 1m 3s remaining. 189177 spikes found.
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2017-06-22 23:56:07  progressbar:97          52% complete, 2h 12m 57s elapsed, 2h 1m 2s remaining. 190685 spikes found.
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2017-06-22 23:56:38  progressbar:97          52% complete, 2h 13m 28s elapsed, 2h 1m 1s remaining. 192209 spikes found.
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2017-06-22 23:57:08  progressbar:97          52% complete, 2h 13m 58s elapsed, 2h 0m 50s remaining. 193543 spikes found.
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2017-06-22 23:57:38  progressbar:97          52% complete, 2h 14m 29s elapsed, 2h 0m 35s remaining. 194670 spikes found.
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2017-06-23 00:05:49  progressbar:97          54% complete, 2h 22m 39s elapsed, 1h 58m 25s remaining. 217136 spikes found.
2017-06-23 00:05:49  main:222                Processing chunk <Chunk (289215700/529278480), recording 0>...
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2017-06-23 00:06:19  progressbar:97          54% complete, 2h 23m 10s elapsed, 1h 58m 12s remaining. 218436 spikes found.
2017-06-23 00:06:19  main:222                Processing chunk <Chunk (289905200/529278480), recording 0>...
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2017-06-23 00:06:50  progressbar:97          54% complete, 2h 23m 40s elapsed, 1h 58m 2s remaining. 219913 spikes found.
2017-06-23 00:06:50  main:222                Processing chunk <Chunk (290555300/529278480), recording 0>...
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2017-06-23 00:07:20  progressbar:97          55% complete, 2h 24m 10s elapsed, 1h 57m 52s remaining. 221212 spikes found.
2017-06-23 00:07:20  main:222                Processing chunk <Chunk (291205400/529278480), recording 0>...
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2017-06-23 00:07:50  progressbar:97          55% complete, 2h 24m 41s elapsed, 1h 57m 36s remaining. 222450 spikes found.
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2017-06-23 00:09:22  progressbar:97          55% complete, 2h 26m 12s elapsed, 1h 56m 57s remaining. 226576 spikes found.
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2017-06-23 00:10:23  progressbar:97          55% complete, 2h 27m 14s elapsed, 1h 56m 35s remaining. 229052 spikes found.
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2017-06-23 00:10:54  progressbar:97          55% complete, 2h 27m 45s elapsed, 1h 56m 28s remaining. 230346 spikes found.
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2017-06-23 00:11:24  progressbar:97          56% complete, 2h 28m 15s elapsed, 1h 56m 19s remaining. 231594 spikes found.
2017-06-23 00:11:24  main:222                Processing chunk <Chunk (296583500/529278480), recording 0>...
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2017-06-23 00:11:55  progressbar:97          56% complete, 2h 28m 45s elapsed, 1h 56m 9s remaining. 232826 spikes found.
2017-06-23 00:11:55  main:222                Processing chunk <Chunk (297213900/529278480), recording 0>...
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2017-06-23 00:12:25  progressbar:97          56% complete, 2h 29m 16s elapsed, 1h 56m 2s remaining. 234369 spikes found.
2017-06-23 00:12:25  main:222                Processing chunk <Chunk (297785200/529278480), recording 0>...
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2017-06-23 00:12:56  progressbar:97          56% complete, 2h 29m 46s elapsed, 1h 55m 59s remaining. 235843 spikes found.
2017-06-23 00:12:56  main:222                Processing chunk <Chunk (298277700/529278480), recording 0>...
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2017-06-23 00:13:26  progressbar:97          56% complete, 2h 30m 16s elapsed, 1h 55m 51s remaining. 237472 spikes found.
2017-06-23 00:13:26  main:222                Processing chunk <Chunk (298868700/529278480), recording 0>...
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2017-06-23 00:13:57  progressbar:97          56% complete, 2h 30m 48s elapsed, 1h 55m 42s remaining. 239083 spikes found.
2017-06-23 00:13:57  main:222                Processing chunk <Chunk (299479400/529278480), recording 0>...
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2017-06-23 00:14:28  progressbar:97          56% complete, 2h 31m 19s elapsed, 1h 55m 38s remaining. 240525 spikes found.
2017-06-23 00:14:28  main:222                Processing chunk <Chunk (300011300/529278480), recording 0>...
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2017-06-23 00:15:28  progressbar:97          56% complete, 2h 32m 19s elapsed, 1h 55m 8s remaining. 243131 spikes found.
2017-06-23 00:15:28  main:222                Processing chunk <Chunk (301429700/529278480), recording 0>...
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2017-06-23 00:15:59  progressbar:97          57% complete, 2h 32m 50s elapsed, 1h 54m 58s remaining. 244595 spikes found.
2017-06-23 00:15:59  main:222                Processing chunk <Chunk (302060100/529278480), recording 0>...
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2017-06-23 00:16:30  progressbar:97          57% complete, 2h 33m 21s elapsed, 1h 54m 44s remaining. 246035 spikes found.
2017-06-23 00:16:30  main:222                Processing chunk <Chunk (302749600/529278480), recording 0>...
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2017-06-23 00:17:00  progressbar:97          57% complete, 2h 33m 51s elapsed, 1h 54m 28s remaining. 247369 spikes found.
2017-06-23 00:17:00  main:222                Processing chunk <Chunk (303478500/529278480), recording 0>...
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2017-06-23 00:17:31  progressbar:97          57% complete, 2h 34m 22s elapsed, 1h 54m 13s remaining. 248808 spikes found.
2017-06-23 00:17:31  main:222                Processing chunk <Chunk (304187700/529278480), recording 0>...
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2017-06-23 00:18:02  progressbar:97          57% complete, 2h 34m 52s elapsed, 1h 54m 1s remaining. 250371 spikes found.
2017-06-23 00:18:02  main:222                Processing chunk <Chunk (304837800/529278480), recording 0>...
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2017-06-23 00:18:32  progressbar:97          57% complete, 2h 35m 23s elapsed, 1h 53m 51s remaining. 251816 spikes found.
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2017-06-23 00:19:02  progressbar:97          57% complete, 2h 35m 53s elapsed, 1h 53m 36s remaining. 253354 spikes found.
2017-06-23 00:19:02  main:222                Processing chunk <Chunk (306157700/529278480), recording 0>...
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2017-06-23 00:19:33  progressbar:97          57% complete, 2h 36m 24s elapsed, 1h 53m 20s remaining. 254891 spikes found.
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2017-06-23 00:20:04  progressbar:97          58% complete, 2h 36m 54s elapsed, 1h 53m 4s remaining. 256338 spikes found.
2017-06-23 00:20:04  main:222                Processing chunk <Chunk (307615500/529278480), recording 0>...
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2017-06-23 00:20:34  progressbar:97          58% complete, 2h 37m 24s elapsed, 1h 52m 48s remaining. 257868 spikes found.
2017-06-23 00:20:34  main:222                Processing chunk <Chunk (308324700/529278480), recording 0>...
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2017-06-23 00:21:04  progressbar:97          58% complete, 2h 37m 55s elapsed, 1h 52m 36s remaining. 259501 spikes found.
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2017-06-23 01:37:27  progressbar:97          91% complete, 3h 54m 17s elapsed, 20m 38s remaining. 349273 spikes found.
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2017-06-23 01:37:57  progressbar:97          92% complete, 3h 54m 47s elapsed, 20m 4s remaining. 349448 spikes found.
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