2017-06-23 10:41:52  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170506_468um_36um_170506_111835/20170506_468um_36um_170506_111835.dat>
2017-06-23 10:41:52  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170506_468um_36um_170506_111835/8/20170506_468um_36um_170506_111835_sh8',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 5,
 'pca_nwaveforms_max': 20000,
 'prb_file': '8.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170506_468um_36um_170506_111835/20170506_468um_36um_170506_111835.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 5.0,
 'threshold_weak_std_factor': 2.5,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-06-23 10:42:20  main:200                Threshold: DoubleThreshold(strong=array([ 290.95014486,  293.93369923,  302.78161716,  181.0368355 ,
        303.97261618,  313.64726565,  303.78652814,  275.53090052,
        289.4151892 ,  284.24633366,  282.69188954,  286.0888843 ,
        284.1166717 ,  297.41718344,  297.36030104,  305.76159664,
        290.73341747,  288.76999968,  264.932764  ,  261.91033521,
        276.43241846,  273.93616925,  288.75902526,  271.18343923,
        251.29253657,  287.0526081 ,  299.72383224,  291.05377064,
        253.96714553,  265.12499945,  267.11414013,  276.52249409,
        256.8036795 ,  273.98473477,  286.52672206,  294.33913031,
        299.35487159,  294.9514665 ,  297.25918128,  284.56783634,
        290.32702507,  295.83688617,  297.90447243,  304.79839069,
        300.38927044,  292.5186561 ,  298.75219487,  296.12289307,
        265.84026303,  283.41136788,  267.50217036,  278.16536894,
        250.11097296,  285.56986017,  218.37338563,  221.22771164,
        219.97436906,  280.09576335,  277.20863202,  244.02771041,
        217.83538023,  258.73606883,  231.61021561,  225.38949973,
        334.53538155,  303.24841529,  284.94174111,  294.25747406,
        274.0169985 ,  266.14607046,  276.24727661,  283.20581398,
        277.8524096 ,  299.50205008,  306.40844901,  270.38995124,
        293.52514038,  284.48461372,  267.85735151,  271.69777747,
        300.62712889,  319.67460309,  254.86593707,  289.62628222,
        276.19835009,  246.24982975,  305.60821909,  295.40233596,
        284.22483665,  305.09124171,  282.28576477,  279.33172666,
        277.24744971,  271.19749307,  276.17727489,  276.0759283 ]), weak=array([ 145.47507243,  146.96684961,  151.39080858,   90.51841775,
        151.98630809,  156.82363283,  151.89326407,  137.76545026,
        144.7075946 ,  142.12316683,  141.34594477,  143.04444215,
        142.05833585,  148.70859172,  148.68015052,  152.88079832,
        145.36670873,  144.38499984,  132.466382  ,  130.9551676 ,
        138.21620923,  136.96808463,  144.37951263,  135.59171961,
        125.64626828,  143.52630405,  149.86191612,  145.52688532,
        126.98357276,  132.56249973,  133.55707006,  138.26124704,
        128.40183975,  136.99236739,  143.26336103,  147.16956515,
        149.67743579,  147.47573325,  148.62959064,  142.28391817,
        145.16351254,  147.91844308,  148.95223621,  152.39919535,
        150.19463522,  146.25932805,  149.37609744,  148.06144653,
        132.92013152,  141.70568394,  133.75108518,  139.08268447,
        125.05548648,  142.78493009,  109.18669282,  110.61385582,
        109.98718453,  140.04788168,  138.60431601,  122.0138552 ,
        108.91769012,  129.36803441,  115.8051078 ,  112.69474986,
        167.26769078,  151.62420764,  142.47087055,  147.12873703,
        137.00849925,  133.07303523,  138.1236383 ,  141.60290699,
        138.9262048 ,  149.75102504,  153.2042245 ,  135.19497562,
        146.76257019,  142.24230686,  133.92867576,  135.84888874,
        150.31356444,  159.83730155,  127.43296854,  144.81314111,
        138.09917505,  123.12491488,  152.80410954,  147.70116798,
        142.11241832,  152.54562086,  141.14288238,  139.66586333,
        138.62372486,  135.59874654,  138.08863745,  138.03796415]))
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2017-06-23 12:37:50  progressbar:97          53% complete, 1h 55m 30s elapsed, 1h 41m 12s remaining. 569610 spikes found.
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2017-06-23 12:42:26  progressbar:97          54% complete, 2h 0m 5s elapsed, 1h 40m 39s remaining. 602540 spikes found.
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2017-06-23 12:43:57  progressbar:97          54% complete, 2h 1m 37s elapsed, 1h 40m 20s remaining. 613191 spikes found.
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2017-06-23 12:44:28  progressbar:97          54% complete, 2h 2m 8s elapsed, 1h 40m 14s remaining. 616906 spikes found.
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2017-06-23 12:44:58  progressbar:97          55% complete, 2h 2m 38s elapsed, 1h 40m 9s remaining. 620778 spikes found.
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2017-06-23 12:45:28  progressbar:97          55% complete, 2h 3m 8s elapsed, 1h 39m 59s remaining. 624302 spikes found.
2017-06-23 12:45:28  main:222                Processing chunk <Chunk (292091900/529278480), recording 0>...
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2017-06-23 12:45:58  progressbar:97          55% complete, 2h 3m 38s elapsed, 1h 39m 54s remaining. 627938 spikes found.
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2017-06-23 12:47:30  progressbar:97          55% complete, 2h 5m 10s elapsed, 1h 39m 34s remaining. 638668 spikes found.
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2017-06-23 12:48:00  progressbar:97          55% complete, 2h 5m 40s elapsed, 1h 39m 28s remaining. 642340 spikes found.
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2017-06-23 12:49:02  progressbar:97          56% complete, 2h 6m 42s elapsed, 1h 39m 17s remaining. 650121 spikes found.
2017-06-23 12:49:02  main:222                Processing chunk <Chunk (296741100/529278480), recording 0>...
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2017-06-23 12:50:03  progressbar:97          56% complete, 2h 7m 43s elapsed, 1h 39m 5s remaining. 657733 spikes found.
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2017-06-23 12:51:04  progressbar:97          56% complete, 2h 8m 44s elapsed, 1h 38m 55s remaining. 665230 spikes found.
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2017-06-23 12:51:35  progressbar:97          56% complete, 2h 9m 15s elapsed, 1h 38m 48s remaining. 669102 spikes found.
2017-06-23 12:51:35  main:222                Processing chunk <Chunk (299971900/529278480), recording 0>...
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2017-06-23 12:52:06  progressbar:97          56% complete, 2h 9m 46s elapsed, 1h 38m 40s remaining. 673028 spikes found.
2017-06-23 12:52:06  main:222                Processing chunk <Chunk (300661400/529278480), recording 0>...
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2017-06-23 12:52:36  progressbar:97          56% complete, 2h 10m 16s elapsed, 1h 38m 31s remaining. 676746 spikes found.
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2017-06-23 12:53:07  progressbar:97          57% complete, 2h 10m 47s elapsed, 1h 38m 23s remaining. 680378 spikes found.
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2017-06-23 12:53:38  progressbar:97          57% complete, 2h 11m 18s elapsed, 1h 38m 13s remaining. 684178 spikes found.
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2017-06-23 12:54:08  progressbar:97          57% complete, 2h 11m 48s elapsed, 1h 38m 2s remaining. 687929 spikes found.
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2017-06-23 12:54:38  progressbar:97          57% complete, 2h 12m 18s elapsed, 1h 37m 52s remaining. 691820 spikes found.
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2017-06-23 12:55:09  progressbar:97          57% complete, 2h 12m 49s elapsed, 1h 37m 44s remaining. 695756 spikes found.
2017-06-23 12:55:09  main:222                Processing chunk <Chunk (304896900/529278480), recording 0>...
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2017-06-23 12:55:39  progressbar:97          57% complete, 2h 13m 19s elapsed, 1h 37m 34s remaining. 699315 spikes found.
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2017-06-23 12:58:12  progressbar:97          58% complete, 2h 15m 52s elapsed, 1h 36m 49s remaining. 716833 spikes found.
2017-06-23 12:58:12  main:222                Processing chunk <Chunk (309033900/529278480), recording 0>...
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2017-06-23 12:58:42  progressbar:97          58% complete, 2h 16m 22s elapsed, 1h 36m 40s remaining. 720363 spikes found.
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2017-06-23 13:00:13  progressbar:97          58% complete, 2h 17m 53s elapsed, 1h 36m 3s remaining. 731225 spikes found.
2017-06-23 13:00:13  main:222                Processing chunk <Chunk (311969200/529278480), recording 0>...
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2017-06-23 13:00:43  progressbar:97          59% complete, 2h 18m 23s elapsed, 1h 35m 53s remaining. 734814 spikes found.
2017-06-23 13:00:43  main:222                Processing chunk <Chunk (312658700/529278480), recording 0>...
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2017-06-23 13:01:14  progressbar:97          59% complete, 2h 18m 54s elapsed, 1h 35m 43s remaining. 738472 spikes found.
2017-06-23 13:01:14  main:222                Processing chunk <Chunk (313328500/529278480), recording 0>...
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2017-06-23 13:01:44  progressbar:97          59% complete, 2h 19m 24s elapsed, 1h 35m 32s remaining. 741921 spikes found.
2017-06-23 13:01:44  main:222                Processing chunk <Chunk (314037700/529278480), recording 0>...
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2017-06-23 13:02:14  progressbar:97          59% complete, 2h 19m 54s elapsed, 1h 35m 24s remaining. 745448 spikes found.
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2017-06-23 14:33:48  progressbar:97          100% complete, 3h 51m 28s elapsed, 0s remaining. 1345196 spikes found.