2017-06-04 11:48:18  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170508_468um_36um_170508_102251/20170508_468um_36um_170508_102251.dat>
2017-06-04 11:48:18  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170508_468um_36um_170508_102251/2/20170508_468um_36um_170508_102251_sh2',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '2.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170508_468um_36um_170508_102251/20170508_468um_36um_170508_102251.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-06-04 11:49:12  main:200                Threshold: DoubleThreshold(strong=array([ 261.00708033,  269.8668507 ,  276.1777946 ,  107.71916161,
        276.96703879,  285.37546097,  279.44708533,  251.62697889,
        271.14879568,  265.3379891 ,  260.73654826,  260.04387935,
        256.45087093,  259.6457187 ,  279.61843834,  284.81250836,
        266.22425128,  267.14252537,  227.16713738,  254.15720081,
        252.18335592,  239.35804899,  260.13365428,  239.16187047,
        238.12739263,  266.38940857,  269.02930875,  276.08324608,
        241.79823435,  268.43072534,  250.51951446,  267.15779211,
        210.8734451 ,  216.94607333,  220.55219931,  229.2281487 ,
        223.20827398,  232.64412204,  240.22650157,  228.09020947,
        259.09845755,  264.57390677,  268.12723992,  262.67960739,
        260.77839182,  260.41697749,  266.33958068,  265.95678981,
        241.13442996,  260.45445601,  244.54499508,  253.7312693 ,
        243.19363662,  264.59641985,  207.74940688,  221.0472494 ,
        196.91927021,  259.33345263,  188.62839112,  185.47655643,
        205.30884547,  236.71408522,  243.03256726,  207.91104736,
        288.85584388,  294.16942668,  261.0672859 ,  257.62337385,
        247.44705802,  240.13896614,  251.46014021,  246.82970967,
        264.59804548,  282.58166443,  246.88293487,  231.39862417,
        263.56720488,  240.74675471,  236.8122865 ,  244.7320855 ,
        271.37743354,  276.58111516,  257.71239334,  264.11091134,
        258.48477839,  254.40069073,  266.50604496,  261.00568395,
        286.53099783,  300.88977222,  251.42141956,  269.70473954,
        259.6654006 ,  246.51216717,  279.84673688,  267.82972543]), weak=array([ 116.00314681,  119.94082253,  122.74568649,   47.87518294,
        123.09646169,  126.83353821,  124.19870459,  111.83421284,
        120.51057586,  117.92799516,  115.88291034,  115.57505749,
        113.97816486,  115.3980972 ,  124.27486148,  126.58333705,
        118.32188946,  118.73001128,  100.96317217,  112.95875592,
        112.08149152,  106.38135511,  115.61495746,  106.29416465,
        105.83439672,  118.3952927 ,  119.56858166,  122.70366493,
        107.46588193,  119.30254459,  111.34200643,  118.73679649,
         93.72153115,   96.42047703,   98.02319969,  101.8791772 ,
         99.20367732,  103.39738757,  106.76733403,  101.37342643,
        115.15487002,  117.58840301,  119.16766219,  116.74649217,
        115.90150748,  115.74087888,  118.37314697,  118.20301769,
        107.17085776,  115.75753601,  108.68666448,  112.76945302,
        108.08606072,  117.59840882,   92.33306972,   98.24322195,
         87.51967565,  115.25931228,   83.8348405 ,   82.43402508,
         91.24837576,  105.2062601 ,  108.01447434,   92.40490994,
        128.38037506,  130.74196741,  116.02990485,  114.49927727,
        109.97647023,  106.7284294 ,  111.76006231,  109.70209319,
        117.59913133,  125.59185086,  109.72574883,  102.84383296,
        117.14097994,  106.99855765,  105.24990511,  108.76981578,
        120.61219269,  122.92494007,  114.53884148,  117.38262726,
        114.88212373,  113.06697366,  118.44713109,  116.0025262 ,
        127.34711015,  133.72878765,  111.74285314,  119.86877313,
        115.40684471,  109.56096319,  124.3763275 ,  119.03543352]))
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2017-06-04 11:49:43  progressbar:97          0% complete, 31s elapsed, 3h 45m 39s remaining. 6112 spikes found.
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2017-06-04 13:16:53  progressbar:97          37% complete, 1h 27m 40s elapsed, 2h 28m 40s remaining. 668370 spikes found.
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2017-06-04 13:17:23  progressbar:97          37% complete, 1h 28m 10s elapsed, 2h 28m 31s remaining. 671215 spikes found.
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2017-06-04 13:33:00  progressbar:97          42% complete, 1h 43m 47s elapsed, 2h 19m 40s remaining. 786413 spikes found.
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2017-06-04 13:33:30  progressbar:97          42% complete, 1h 44m 17s elapsed, 2h 19m 36s remaining. 789997 spikes found.
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2017-06-04 13:35:32  progressbar:97          43% complete, 1h 46m 19s elapsed, 2h 19m 54s remaining. 811019 spikes found.
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2017-06-04 13:36:02  progressbar:97          43% complete, 1h 46m 49s elapsed, 2h 19m 42s remaining. 814542 spikes found.
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