2017-05-28 04:30:44  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170509_468um_36um_170509_103451/20170509_468um_36um_170509_103451.dat>
2017-05-28 04:30:44  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170509_468um_36um_170509_103451/12/20170509_468um_36um_170509_103451_sh12',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '12.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170509_468um_36um_170509_103451/20170509_468um_36um_170509_103451.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-05-28 04:32:53  main:200                Threshold: DoubleThreshold(strong=array([ 256.07395074,  260.98719311,  272.26971225,  106.72317935,
        271.71313422,  275.05380554,  264.90526655,  229.79807242,
        256.92400439,  251.25029573,  246.4575686 ,  245.66900306,
        245.46251559,  248.68995584,  261.11759977,  266.51275723,
        255.92783255,  256.78810831,  235.87826188,  229.20499404,
        231.07161842,  224.52746675,  242.06601552,  232.47606954,
        229.40131822,  242.48579865,  252.85802647,  242.54588185,
        231.78760925,  223.35627971,  212.87372067,  252.085533  ,
        208.02348798,  215.12656401,  219.49833343,  229.73250809,
        231.21754678,  236.79089059,  245.71860632,  236.60168919,
        253.34159404,  252.05856065,  263.79278454,  260.22331745,
        258.58902273,  250.18971727,  257.61354695,  258.61550447,
        238.92659021,  257.20844581,  237.14691992,  259.51340591,
        226.64451709,  259.59556476,  231.21201859,  207.06148051,
        239.66193376,  247.09407374,  200.63306826,  212.16354382,
        232.56032906,  217.48443303,  228.52452977,  253.33858463,
        265.12644468,  272.16674769,  256.33670302,  235.60621949,
        242.29338934,  237.85483182,  244.26993371,  233.79257034,
        258.43793351,  256.66023018,  217.85227165,  231.22778974,
        230.75152295,  244.01937253,  239.82615276,  238.87662689,
        253.18419909,  262.79273495,  239.99119378,  261.00450105,
        245.77944546,  239.50900085,  238.0408853 ,  250.96562776,
        292.90923378,  267.06497437,  249.71914568,  273.54693448,
        255.2981118 ,  240.78440748,  273.78440968,  275.41020908]), weak=array([ 113.81064477,  115.99430805,  121.008761  ,   47.43252416,
        120.76139299,  122.24613579,  117.73567402,  102.13247663,
        114.18844639,  111.6667981 ,  109.53669715,  109.18622358,
        109.09445137,  110.52886926,  116.05226656,  118.45011432,
        113.74570336,  114.12804814,  104.83478306,  101.86888624,
        102.69849708,   99.78998522,  107.58489579,  103.32269757,
        101.95614143,  107.77146607,  112.3813451 ,  107.79816971,
        103.01671522,   99.26945765,   94.61054252,  112.03801467,
         92.45488355,   95.61180623,   97.55481486,  102.10333693,
        102.76335413,  105.24039582,  109.20826947,  105.1563063 ,
        112.59626402,  112.02602696,  117.24123757,  115.65480776,
        114.92845455,  111.1954299 ,  114.49490976,  114.94022421,
        106.18959565,  114.31486481,  105.39863107,  115.33929152,
        100.73089648,  115.37580656,  102.76089715,   92.02732467,
        106.516415  ,  109.81958833,   89.17025256,   94.29490836,
        103.36014625,   96.65974801,  101.56645768,  112.5949265 ,
        117.83397541,  120.96299897,  113.92742357,  104.71387533,
        107.68595082,  105.71325859,  108.56441498,  103.90780904,
        114.86130378,  114.07121341,   96.82323184,  102.76790655,
        102.55623242,  108.45305446,  106.58940123,  106.16738973,
        112.52631071,  116.79677109,  106.66275279,  116.00200046,
        109.23530909,  106.44844482,  105.79594902,  111.540279  ,
        130.18188168,  118.69554416,  110.98628697,  121.57641532,
        113.46582747,  107.01529222,  121.68195986,  122.40453737]))
2017-05-28 04:32:53  main:222                Processing chunk <Chunk (0/528686640), recording 0>...
2017-05-28 04:32:54  progressbar:97          0% complete, 0s elapsed. 9 spikes found.
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2017-05-28 04:33:26  progressbar:97          0% complete, 31s elapsed, 5h 21m 49s remaining. 502 spikes found.
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2017-05-28 04:33:56  progressbar:97          0% complete, 1m 2s elapsed, 5h 18m 34s remaining. 846 spikes found.
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2017-05-28 04:34:26  progressbar:97          0% complete, 1m 32s elapsed, 5h 15m 56s remaining. 1269 spikes found.
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2017-05-28 04:40:59  progressbar:97          2% complete, 8m 6s elapsed, 4h 22m 39s remaining. 6017 spikes found.
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2017-05-28 04:42:30  progressbar:97          3% complete, 9m 37s elapsed, 4h 27m 13s remaining. 6731 spikes found.
2017-05-28 04:42:30  main:222                Processing chunk <Chunk (18380100/528686640), recording 0>...
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2017-05-28 04:43:00  progressbar:97          3% complete, 10m 7s elapsed, 4h 25m 28s remaining. 6895 spikes found.
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2017-05-28 04:43:31  progressbar:97          3% complete, 10m 38s elapsed, 4h 25m 29s remaining. 7002 spikes found.
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2017-05-28 05:14:28  progressbar:97          14% complete, 41m 34s elapsed, 4h 9m 23s remaining. 26782 spikes found.
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2017-05-28 05:15:00  progressbar:97          14% complete, 42m 5s elapsed, 4h 9m 5s remaining. 26987 spikes found.
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2017-05-28 05:15:29  progressbar:97          14% complete, 42m 35s elapsed, 4h 8m 56s remaining. 27148 spikes found.
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2017-05-28 05:15:59  progressbar:97          14% complete, 43m 5s elapsed, 4h 8m 58s remaining. 27398 spikes found.
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2017-05-28 05:23:06  progressbar:97          17% complete, 50m 11s elapsed, 4h 1m 17s remaining. 32509 spikes found.
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2017-05-28 05:26:37  progressbar:97          18% complete, 53m 44s elapsed, 3h 57m 19s remaining. 36900 spikes found.
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2017-05-28 05:27:09  progressbar:97          18% complete, 54m 14s elapsed, 3h 57m 15s remaining. 38265 spikes found.
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2017-05-28 05:27:38  progressbar:97          18% complete, 54m 45s elapsed, 3h 57m 16s remaining. 39878 spikes found.
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2017-05-28 05:28:10  progressbar:97          18% complete, 55m 15s elapsed, 3h 57m 25s remaining. 42104 spikes found.
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2017-05-28 05:28:40  progressbar:97          19% complete, 55m 46s elapsed, 3h 57m 44s remaining. 44396 spikes found.
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2017-05-28 05:29:10  progressbar:97          19% complete, 56m 16s elapsed, 3h 57m 17s remaining. 45794 spikes found.
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2017-05-28 05:29:40  progressbar:97          19% complete, 56m 46s elapsed, 3h 57m 30s remaining. 47770 spikes found.
2017-05-28 05:29:40  main:222                Processing chunk <Chunk (102006600/528686640), recording 0>...
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2017-05-28 05:30:11  progressbar:97          19% complete, 57m 18s elapsed, 3h 57m 44s remaining. 50711 spikes found.
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2017-05-28 05:30:42  progressbar:97          19% complete, 57m 48s elapsed, 3h 58m 13s remaining. 55835 spikes found.
2017-05-28 05:30:42  main:222                Processing chunk <Chunk (103247700/528686640), recording 0>...
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2017-05-28 05:31:13  progressbar:97          19% complete, 58m 19s elapsed, 3h 58m 32s remaining. 60975 spikes found.
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2017-05-28 05:31:42  progressbar:97          19% complete, 58m 49s elapsed, 3h 58m 51s remaining. 66347 spikes found.
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2017-05-28 05:32:13  progressbar:97          19% complete, 59m 19s elapsed, 3h 59m 6s remaining. 70707 spikes found.
2017-05-28 05:32:13  main:222                Processing chunk <Chunk (105099500/528686640), recording 0>...
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2017-05-28 05:32:43  progressbar:97          20% complete, 59m 49s elapsed, 3h 59m 14s remaining. 75339 spikes found.
2017-05-28 05:32:43  main:222                Processing chunk <Chunk (105769300/528686640), recording 0>...
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2017-05-28 05:33:13  progressbar:97          20% complete, 1h 0m 20s elapsed, 3h 59m 9s remaining. 80156 spikes found.
2017-05-28 05:33:13  main:222                Processing chunk <Chunk (106517900/528686640), recording 0>...
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2017-05-28 05:33:43  progressbar:97          20% complete, 1h 0m 50s elapsed, 3h 59m 22s remaining. 87109 spikes found.
2017-05-28 05:33:43  main:222                Processing chunk <Chunk (107148300/528686640), recording 0>...
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2017-05-28 05:34:14  progressbar:97          20% complete, 1h 1m 20s elapsed, 3h 59m 38s remaining. 94421 spikes found.
2017-05-28 05:34:14  main:222                Processing chunk <Chunk (107759000/528686640), recording 0>...
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2017-05-28 05:34:44  progressbar:97          20% complete, 1h 1m 51s elapsed, 4h 0m 5s remaining. 99927 spikes found.
2017-05-28 05:34:44  main:222                Processing chunk <Chunk (108310600/528686640), recording 0>...
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2017-05-28 06:03:04  progressbar:97          31% complete, 1h 30m 11s elapsed, 3h 12m 33s remaining. 130621 spikes found.
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2017-05-28 06:03:34  progressbar:97          32% complete, 1h 30m 41s elapsed, 3h 11m 46s remaining. 131239 spikes found.
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2017-05-28 06:12:41  main:222                Processing chunk <Chunk (191818900/528686640), recording 0>...
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2017-05-28 06:13:11  progressbar:97          36% complete, 1h 40m 17s elapsed, 2h 54m 41s remaining. 138576 spikes found.
2017-05-28 06:13:11  main:222                Processing chunk <Chunk (192823600/528686640), recording 0>...
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2017-05-28 06:13:41  progressbar:97          36% complete, 1h 40m 48s elapsed, 2h 53m 53s remaining. 138925 spikes found.
2017-05-28 06:13:41  main:222                Processing chunk <Chunk (194005600/528686640), recording 0>...
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2017-05-28 06:14:12  progressbar:97          36% complete, 1h 41m 18s elapsed, 2h 53m 24s remaining. 139084 spikes found.
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2017-05-28 06:15:43  progressbar:97          37% complete, 1h 42m 50s elapsed, 2h 51m 38s remaining. 139619 spikes found.
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2017-05-28 06:16:13  progressbar:97          37% complete, 1h 43m 20s elapsed, 2h 50m 48s remaining. 140036 spikes found.
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2017-05-28 06:16:46  progressbar:97          37% complete, 1h 43m 51s elapsed, 2h 50m 7s remaining. 140194 spikes found.
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2017-05-28 06:36:28  progressbar:97          45% complete, 2h 3m 35s elapsed, 2h 25m 23s remaining. 154935 spikes found.
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2017-05-28 06:39:01  progressbar:97          46% complete, 2h 6m 7s elapsed, 2h 23m 38s remaining. 162962 spikes found.
2017-05-28 06:39:01  main:222                Processing chunk <Chunk (247175900/528686640), recording 0>...
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2017-05-28 06:40:32  progressbar:97          47% complete, 2h 7m 38s elapsed, 2h 22m 48s remaining. 169369 spikes found.
2017-05-28 06:40:32  main:222                Processing chunk <Chunk (249520200/528686640), recording 0>...
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2017-05-28 06:41:02  progressbar:97          47% complete, 2h 8m 8s elapsed, 2h 22m 45s remaining. 171321 spikes found.
2017-05-28 06:41:02  main:222                Processing chunk <Chunk (250091500/528686640), recording 0>...
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2017-05-28 06:41:33  progressbar:97          47% complete, 2h 8m 39s elapsed, 2h 22m 39s remaining. 173311 spikes found.
2017-05-28 06:41:33  main:222                Processing chunk <Chunk (250702200/528686640), recording 0>...
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2017-05-28 06:42:04  progressbar:97          47% complete, 2h 9m 10s elapsed, 2h 22m 27s remaining. 174883 spikes found.
2017-05-28 06:42:04  main:222                Processing chunk <Chunk (251431100/528686640), recording 0>...
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2017-05-28 06:42:34  progressbar:97          47% complete, 2h 9m 41s elapsed, 2h 22m 20s remaining. 176601 spikes found.
2017-05-28 06:42:34  main:222                Processing chunk <Chunk (252041800/528686640), recording 0>...
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2017-05-28 06:43:05  progressbar:97          47% complete, 2h 10m 11s elapsed, 2h 22m 10s remaining. 178847 spikes found.
2017-05-28 06:43:05  main:222                Processing chunk <Chunk (252711600/528686640), recording 0>...
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2017-05-28 06:45:07  progressbar:97          48% complete, 2h 12m 13s elapsed, 2h 21m 9s remaining. 188138 spikes found.
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2017-05-28 07:31:35  progressbar:97          66% complete, 2h 58m 42s elapsed, 1h 29m 35s remaining. 327626 spikes found.
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2017-05-28 07:35:38  progressbar:97          68% complete, 3h 2m 45s elapsed, 1h 25m 21s remaining. 330331 spikes found.
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2017-05-28 08:16:03  progressbar:97          86% complete, 3h 43m 10s elapsed, 35m 5s remaining. 352940 spikes found.
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2017-05-28 08:47:20  main:222                Processing chunk <Chunk (527979700/528686640), recording 0>...
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2017-05-28 08:47:21  main:222                Processing chunk <Chunk (528038800/528686640), recording 0>...
2017-05-28 08:47:21  main:222                Processing chunk <Chunk (528058500/528686640), recording 0>...
2017-05-28 08:47:22  main:222                Processing chunk <Chunk (528078200/528686640), recording 0>...
2017-05-28 08:47:22  main:222                Processing chunk <Chunk (528097900/528686640), recording 0>...
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2017-05-28 08:47:25  progressbar:97          99% complete, 4h 14m 31s elapsed, 13s remaining. 379602 spikes found.
2017-05-28 08:47:25  main:222                Processing chunk <Chunk (528216100/528686640), recording 0>...
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2017-05-28 08:47:28  main:222                Processing chunk <Chunk (528354000/528686640), recording 0>...
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2017-05-28 08:47:34  main:222                Processing chunk <Chunk (528570700/528686640), recording 0>...
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2017-05-28 08:47:35  main:222                Processing chunk <Chunk (528649500/528686640), recording 0>...
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2017-05-28 08:47:35  progressbar:97          100% complete, 4h 14m 42s elapsed, 0s remaining. 379678 spikes found.