2017-05-31 11:19:12  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170515_612um_360um_170515_184034/20170515_612um_360um_170515_184034.dat>
2017-05-31 11:19:12  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170515_612um_360um_170515_184034/3/20170515_612um_360um_170515_184034_sh3',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '3.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170515_612um_360um_170515_184034/20170515_612um_360um_170515_184034.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-05-31 11:20:05  main:200                Threshold: DoubleThreshold(strong=array([ 325.02612753,  328.32729026,  345.11345208,  158.88754274,
        338.01765908,  339.52442411,  336.3290653 ,  324.65817105,
        336.95269167,  330.26624362,  324.34145794,  332.67980451,
        324.87429531,  321.0653838 ,  339.5953158 ,  339.25459097,
        318.98570756,  312.29927112,  308.47095104,  299.65231503,
        307.7817555 ,  298.11468488,  315.97445838,  308.85431954,
        302.6766745 ,  321.92264907,  335.60534009,  322.38471878,
        313.63860481,  317.04597086,  310.07663905,  310.78251267,
        267.25764252,  273.23273709,  270.46801587,  283.96000255,
        291.63808459,  276.45797467,  276.30568468,  277.8829401 ,
        276.67107479,  272.7920803 ,  273.31924551,  287.98868418,
        278.86107091,  276.04559545,  290.68684771,  286.64069583,
        264.80858348,  282.25776954,  271.04387639,  275.00381164,
        259.51693022,  269.13446258,  208.82998249,  208.71301529,
        210.3554189 ,  260.81530671,  217.28390971,  221.05032899,
        219.14093631,  269.4313277 ,  219.17962512,  220.46687562,
        280.822312  ,  275.68497325,  278.59284171,  263.5132275 ,
        280.54904247,  269.54572593,  277.33607242,  256.69960896,
        275.07287943,  271.97967558,  266.53637633,  256.94866957,
        261.68693825,  267.67862246,  262.30735924,  267.23929205,
        250.6691122 ,  243.3821321 ,  283.97086039,  272.51712619,
        281.7787668 ,  283.61324955,  275.04710358,  284.26443593,
        270.91481568,  274.92170778,  282.5813284 ,  279.66446172,
        277.79955332,  281.7697491 ,  274.73712412,  278.46435233]), weak=array([ 144.45605668,  145.92324011,  153.38375648,   70.61668566,
        150.2300707 ,  150.89974405,  149.47958458,  144.29252047,
        149.75675185,  146.78499716,  144.15175908,  147.85769089,
        144.38857569,  142.69572613,  150.93125147,  150.77981821,
        141.77142558,  138.79967606,  137.09820046,  133.17880668,
        136.79189133,  132.4954155 ,  140.43309261,  137.26858646,
        134.52296645,  143.07673292,  149.15792893,  143.28209723,
        139.39493547,  140.90932038,  137.81183958,  138.12556119,
        118.78117445,  121.43677204,  120.20800705,  126.20444558,
        129.61692648,  122.87021096,  122.80252652,  123.50352893,
        122.96492213,  121.24092458,  121.47522023,  127.99497075,
        123.93825374,  122.68693131,  129.19415454,  127.39586481,
        117.69270377,  125.44789757,  120.46394506,  122.22391629,
        115.34085788,  119.6153167 ,   92.81332555,   92.76134013,
         93.49129729,  115.91791409,   96.57062654,   98.24459066,
         97.3959717 ,  119.74725676,   97.41316672,   97.98527805,
        124.80991644,  122.52665478,  123.81904076,  117.11699   ,
        124.68846332,  119.79810042,  123.26047663,  114.08871509,
        122.25461308,  120.87985581,  118.4606117 ,  114.1994087 ,
        116.30530589,  118.96827665,  116.58104855,  118.77301869,
        111.40849431,  108.16983649,  126.20927129,  121.11872275,
        125.23500747,  126.05033314,  122.24315715,  126.3397493 ,
        120.40658475,  122.18742568,  125.59170151,  124.29531632,
        123.46646814,  125.2309996 ,  122.1053885 ,  123.76193437]))
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2017-05-31 11:20:36  progressbar:97          2% complete, 30s elapsed, 21m 59s remaining. 2015 spikes found.
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2017-05-31 11:21:07  progressbar:97          4% complete, 1m 1s elapsed, 23m 41s remaining. 5826 spikes found.
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2017-05-31 11:23:38  progressbar:97          13% complete, 3m 32s elapsed, 23m 8s remaining. 23462 spikes found.
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2017-05-31 11:24:09  progressbar:97          14% complete, 4m 3s elapsed, 23m 56s remaining. 28429 spikes found.
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2017-05-31 11:26:40  progressbar:97          21% complete, 6m 34s elapsed, 24m 3s remaining. 48931 spikes found.
2017-05-31 11:26:40  main:222                Processing chunk <Chunk (17887600/83288880), recording 0>...
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2017-05-31 11:27:11  progressbar:97          22% complete, 7m 5s elapsed, 24m 37s remaining. 52364 spikes found.
2017-05-31 11:27:11  main:222                Processing chunk <Chunk (18616500/83288880), recording 0>...
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2017-05-31 11:27:41  progressbar:97          23% complete, 7m 35s elapsed, 25m 8s remaining. 55860 spikes found.
2017-05-31 11:27:41  main:222                Processing chunk <Chunk (19325700/83288880), recording 0>...
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2017-05-31 11:28:12  progressbar:97          24% complete, 8m 6s elapsed, 25m 33s remaining. 59198 spikes found.
2017-05-31 11:28:12  main:222                Processing chunk <Chunk (20054600/83288880), recording 0>...
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2017-05-31 11:28:42  progressbar:97          24% complete, 8m 36s elapsed, 26m 2s remaining. 63298 spikes found.
2017-05-31 11:28:42  main:222                Processing chunk <Chunk (20685000/83288880), recording 0>...
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2017-05-31 11:29:13  progressbar:97          25% complete, 9m 7s elapsed, 26m 21s remaining. 66772 spikes found.
2017-05-31 11:29:13  main:222                Processing chunk <Chunk (21413900/83288880), recording 0>...
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2017-05-31 11:33:16  progressbar:97          37% complete, 13m 10s elapsed, 22m 2s remaining. 95864 spikes found.
2017-05-31 11:33:16  main:222                Processing chunk <Chunk (31145700/83288880), recording 0>...
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2017-05-31 11:33:46  progressbar:97          38% complete, 13m 40s elapsed, 21m 56s remaining. 100732 spikes found.
2017-05-31 11:33:46  main:222                Processing chunk <Chunk (31973100/83288880), recording 0>...
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2017-05-31 11:34:16  progressbar:97          39% complete, 14m 10s elapsed, 21m 49s remaining. 105386 spikes found.
2017-05-31 11:34:16  main:222                Processing chunk <Chunk (32800500/83288880), recording 0>...
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2017-05-31 11:34:47  progressbar:97          40% complete, 14m 41s elapsed, 21m 33s remaining. 109854 spikes found.
2017-05-31 11:34:47  main:222                Processing chunk <Chunk (33746100/83288880), recording 0>...
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2017-05-31 11:35:17  progressbar:97          41% complete, 15m 11s elapsed, 21m 10s remaining. 114575 spikes found.
2017-05-31 11:35:17  main:222                Processing chunk <Chunk (34790200/83288880), recording 0>...
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2017-05-31 11:49:24  progressbar:97          81% complete, 29m 18s elapsed, 6m 35s remaining. 228645 spikes found.
2017-05-31 11:49:24  main:222                Processing chunk <Chunk (68004400/83288880), recording 0>...
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2017-05-31 11:49:55  progressbar:97          82% complete, 29m 49s elapsed, 6m 18s remaining. 232743 spikes found.
2017-05-31 11:49:55  main:222                Processing chunk <Chunk (68733300/83288880), recording 0>...
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2017-05-31 11:50:25  progressbar:97          83% complete, 30m 19s elapsed, 5m 51s remaining. 236118 spikes found.
2017-05-31 11:50:25  main:222                Processing chunk <Chunk (69797100/83288880), recording 0>...
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2017-05-31 11:50:57  progressbar:97          84% complete, 30m 51s elapsed, 5m 32s remaining. 239702 spikes found.
2017-05-31 11:50:57  main:222                Processing chunk <Chunk (70604800/83288880), recording 0>...
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2017-05-31 11:51:27  progressbar:97          85% complete, 31m 21s elapsed, 5m 7s remaining. 243077 spikes found.
2017-05-31 11:51:27  main:222                Processing chunk <Chunk (71589800/83288880), recording 0>...
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2017-05-31 11:52:28  progressbar:97          88% complete, 32m 22s elapsed, 4m 23s remaining. 251258 spikes found.
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2017-05-31 11:52:58  progressbar:97          88% complete, 32m 52s elapsed, 4m 5s remaining. 255587 spikes found.
2017-05-31 11:52:58  main:222                Processing chunk <Chunk (74052300/83288880), recording 0>...
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2017-05-31 11:53:28  progressbar:97          89% complete, 33m 22s elapsed, 3m 54s remaining. 259452 spikes found.
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2017-05-31 11:53:58  progressbar:97          90% complete, 33m 52s elapsed, 3m 39s remaining. 263197 spikes found.
2017-05-31 11:53:58  main:222                Processing chunk <Chunk (75175200/83288880), recording 0>...
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2017-05-31 11:54:29  progressbar:97          91% complete, 34m 23s elapsed, 3m 23s remaining. 267078 spikes found.
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2017-05-31 11:54:59  progressbar:97          91% complete, 34m 53s elapsed, 3m 8s remaining. 270465 spikes found.
2017-05-31 11:54:59  main:222                Processing chunk <Chunk (76416300/83288880), recording 0>...
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2017-05-31 11:55:30  progressbar:97          92% complete, 35m 24s elapsed, 2m 49s remaining. 275054 spikes found.
2017-05-31 11:55:30  main:222                Processing chunk <Chunk (77145200/83288880), recording 0>...
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2017-05-31 11:56:01  progressbar:97          93% complete, 35m 55s elapsed, 2m 31s remaining. 279408 spikes found.
2017-05-31 11:56:01  main:222                Processing chunk <Chunk (77815000/83288880), recording 0>...
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2017-05-31 11:56:31  progressbar:97          94% complete, 36m 25s elapsed, 2m 14s remaining. 283415 spikes found.
2017-05-31 11:56:31  main:222                Processing chunk <Chunk (78465100/83288880), recording 0>...
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2017-05-31 11:57:01  progressbar:97          95% complete, 36m 55s elapsed, 1m 56s remaining. 287514 spikes found.
2017-05-31 11:57:01  main:222                Processing chunk <Chunk (79134900/83288880), recording 0>...
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2017-05-31 11:57:32  progressbar:97          95% complete, 37m 26s elapsed, 1m 38s remaining. 291438 spikes found.
2017-05-31 11:57:32  main:222                Processing chunk <Chunk (79804700/83288880), recording 0>...
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2017-05-31 11:58:02  progressbar:97          96% complete, 37m 56s elapsed, 1m 17s remaining. 295826 spikes found.
2017-05-31 11:58:02  main:222                Processing chunk <Chunk (80533600/83288880), recording 0>...
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