2017-05-23 16:48:54  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170522_900um_936um_170522_151132/20170522_900um_936um_170522_151132.dat>
2017-05-23 16:48:54  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170522_900um_936um_170522_151132/1/20170522_900um_936um_170522_151132_sh1',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '1.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170522_900um_936um_170522_151132/20170522_900um_936um_170522_151132.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-05-23 16:50:02  main:200                Threshold: DoubleThreshold(strong=array([ 314.11462418,  327.8224857 ,  330.05635286,  168.21665718,
        320.10846043,  328.15277595,  315.19487207,  321.8912068 ,
        327.68522583,  326.5835509 ,  330.23741774,  350.91743359,
        325.06846579,  326.467039  ,  311.85589556,  328.53732945,
        306.64317453,  310.08749359,  303.66862296,  311.36230702,
        297.13386999,  295.60901241,  297.29116125,  295.70696339,
        303.00718613,  310.05168991,  313.53157853,  314.74693515,
        303.12764303,  323.89328472,  314.94961971,  299.20789983,
        273.8819567 ,  288.80836748,  286.11135081,  298.06700589,
        300.07166341,  285.33627522,  283.19093034,  279.37086256,
        275.91586756,  263.8562697 ,  257.74809917,  256.14686083,
        263.95854789,  252.59037528,  268.15334953,  274.9059475 ,
        284.71280405,  300.30723605,  284.09199762,  291.99552277,
        275.0474266 ,  291.45711141,  227.05541186,  222.89813356,
        236.43453904,  298.06805992,  283.30520275,  281.33283859,
        264.38149504,  288.0526095 ,  240.17544836,  238.04166039,
        296.68615685,  286.13069114,  286.13593514,  275.86905022,
        278.3263923 ,  275.0675086 ,  276.26952486,  271.70009369,
        279.96735022,  281.1986893 ,  278.32490015,  270.76811166,
        276.43488508,  274.10143611,  272.86867791,  276.04961463,
        222.11427956,  238.07134739,  251.98184466,  231.36720176,
        240.01479704,  271.63104944,  225.60143714,  223.54829933,
        288.48238452,  290.60890892,  283.80835002,  289.67232643,
        282.81300472,  279.90831627,  288.17556596,  284.99397615]), weak=array([ 139.60649964,  145.69888253,  146.69171238,   74.76295875,
        142.27042686,  145.8456782 ,  140.08660981,  143.06275858,
        145.63787815,  145.14824484,  146.77218566,  155.96330382,
        144.47487368,  145.09646178,  138.60262025,  146.01659087,
        136.28585535,  137.81666382,  134.96383243,  138.38324757,
        132.05949777,  131.38178329,  132.129405  ,  131.42531706,
        134.6698605 ,  137.80075107,  139.34736823,  139.88752673,
        134.7233969 ,  143.95257098,  139.97760876,  132.98128881,
        121.72531409,  128.35927444,  127.16060036,  132.47422484,
        133.36518374,  126.81612232,  125.86263571,  124.1648278 ,
        122.62927447,  117.2694532 ,  114.55471074,  113.84304926,
        117.31491017,  112.26238901,  119.17926646,  122.18042111,
        126.53902402,  133.46988269,  126.26311005,  129.7757879 ,
        122.24330071,  129.53649396,  100.91351638,   99.06583714,
        105.08201735,  132.4746933 ,  125.91342345,  125.03681715,
        117.50288668,  128.023382  ,  106.74464371,  105.79629351,
        131.86051416,  127.16919606,  127.17152673,  122.60846676,
        123.7006188 ,  122.25222604,  122.78645549,  120.75559719,
        124.42993343,  124.97719525,  123.69995562,  120.34138296,
        122.85994892,  121.82286049,  121.27496796,  122.68871761,
         98.71745758,  105.80948773,  111.99193096,  102.82986745,
        106.67324313,  120.72491086,  100.2673054 ,   99.3547997 ,
        128.21439312,  129.15951507,  126.13704445,  128.74325619,
        125.69466876,  124.40369612,  128.07802932,  126.6639894 ]))
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2017-05-23 16:50:32  progressbar:97          1% complete, 30s elapsed, 36m 38s remaining. 1984 spikes found.
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2017-05-23 17:02:08  progressbar:97          25% complete, 12m 6s elapsed, 34m 33s remaining. 62490 spikes found.
2017-05-23 17:02:08  main:222                Processing chunk <Chunk (34967500/134804880), recording 0>...
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2017-05-23 17:02:39  progressbar:97          26% complete, 12m 37s elapsed, 35m 9s remaining. 67964 spikes found.
2017-05-23 17:02:39  main:222                Processing chunk <Chunk (35597900/134804880), recording 0>...
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2017-05-23 17:03:09  progressbar:97          26% complete, 13m 7s elapsed, 35m 35s remaining. 73149 spikes found.
2017-05-23 17:03:09  main:222                Processing chunk <Chunk (36326800/134804880), recording 0>...
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2017-05-23 17:03:40  progressbar:97          27% complete, 13m 38s elapsed, 35m 55s remaining. 78199 spikes found.
2017-05-23 17:03:40  main:222                Processing chunk <Chunk (37095100/134804880), recording 0>...
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2017-05-23 17:04:10  progressbar:97          28% complete, 14m 8s elapsed, 36m 10s remaining. 83018 spikes found.
2017-05-23 17:04:10  main:222                Processing chunk <Chunk (37883100/134804880), recording 0>...
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2017-05-23 17:05:10  progressbar:97          29% complete, 15m 8s elapsed, 35m 51s remaining. 90879 spikes found.
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2017-05-23 17:05:40  progressbar:97          30% complete, 15m 38s elapsed, 35m 42s remaining. 94602 spikes found.
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2017-05-23 17:06:12  progressbar:97          31% complete, 16m 9s elapsed, 35m 19s remaining. 98320 spikes found.
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2017-05-23 17:06:42  progressbar:97          31% complete, 16m 40s elapsed, 35m 32s remaining. 102935 spikes found.
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2017-05-23 17:08:15  progressbar:97          33% complete, 18m 12s elapsed, 35m 57s remaining. 117542 spikes found.
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2017-05-23 17:08:45  progressbar:97          34% complete, 18m 43s elapsed, 35m 35s remaining. 121011 spikes found.
2017-05-23 17:08:45  main:222                Processing chunk <Chunk (46472300/134804880), recording 0>...
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2017-05-23 17:09:16  progressbar:97          35% complete, 19m 14s elapsed, 35m 42s remaining. 125628 spikes found.
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2017-05-23 17:09:46  progressbar:97          35% complete, 19m 44s elapsed, 35m 43s remaining. 130118 spikes found.
2017-05-23 17:09:46  main:222                Processing chunk <Chunk (47969500/134804880), recording 0>...
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2017-05-23 17:10:17  progressbar:97          36% complete, 20m 14s elapsed, 35m 45s remaining. 135217 spikes found.
2017-05-23 17:10:17  main:222                Processing chunk <Chunk (48737800/134804880), recording 0>...
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2017-05-23 17:10:47  progressbar:97          36% complete, 20m 45s elapsed, 35m 43s remaining. 140098 spikes found.
2017-05-23 17:10:47  main:222                Processing chunk <Chunk (49525800/134804880), recording 0>...
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2017-05-23 17:11:17  progressbar:97          37% complete, 21m 15s elapsed, 35m 42s remaining. 144969 spikes found.
2017-05-23 17:11:17  main:222                Processing chunk <Chunk (50313800/134804880), recording 0>...
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2017-05-23 17:11:48  progressbar:97          37% complete, 21m 46s elapsed, 35m 45s remaining. 149824 spikes found.
2017-05-23 17:11:48  main:222                Processing chunk <Chunk (51023000/134804880), recording 0>...
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2017-05-23 17:12:18  progressbar:97          38% complete, 22m 16s elapsed, 35m 29s remaining. 154073 spikes found.
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2017-05-23 17:12:49  progressbar:97          39% complete, 22m 46s elapsed, 35m 10s remaining. 157898 spikes found.
2017-05-23 17:12:49  main:222                Processing chunk <Chunk (52993000/134804880), recording 0>...
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2017-05-23 17:13:19  progressbar:97          39% complete, 23m 17s elapsed, 35m 6s remaining. 162359 spikes found.
2017-05-23 17:13:19  main:222                Processing chunk <Chunk (53761300/134804880), recording 0>...
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2017-05-23 17:13:49  progressbar:97          40% complete, 23m 47s elapsed, 35m 4s remaining. 167325 spikes found.
2017-05-23 17:13:49  main:222                Processing chunk <Chunk (54490200/134804880), recording 0>...
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2017-05-23 17:14:20  progressbar:97          41% complete, 24m 18s elapsed, 34m 57s remaining. 172105 spikes found.
2017-05-23 17:14:20  main:222                Processing chunk <Chunk (55278200/134804880), recording 0>...
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2017-05-23 17:14:50  progressbar:97          41% complete, 24m 48s elapsed, 34m 51s remaining. 176885 spikes found.
2017-05-23 17:14:50  main:222                Processing chunk <Chunk (56046500/134804880), recording 0>...
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2017-05-23 17:15:20  progressbar:97          42% complete, 25m 18s elapsed, 34m 39s remaining. 181363 spikes found.
2017-05-23 17:15:20  main:222                Processing chunk <Chunk (56893600/134804880), recording 0>...
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2017-05-23 17:15:50  progressbar:97          42% complete, 25m 48s elapsed, 34m 31s remaining. 185968 spikes found.
2017-05-23 17:15:50  main:222                Processing chunk <Chunk (57661900/134804880), recording 0>...
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2017-05-23 17:16:20  progressbar:97          43% complete, 26m 18s elapsed, 34m 28s remaining. 190791 spikes found.
2017-05-23 17:16:20  main:222                Processing chunk <Chunk (58351400/134804880), recording 0>...
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2017-05-23 17:16:51  progressbar:97          43% complete, 26m 49s elapsed, 34m 19s remaining. 195789 spikes found.
2017-05-23 17:16:51  main:222                Processing chunk <Chunk (59139400/134804880), recording 0>...
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2017-05-23 17:17:21  progressbar:97          44% complete, 27m 19s elapsed, 34m 5s remaining. 200254 spikes found.
2017-05-23 17:17:21  main:222                Processing chunk <Chunk (59986500/134804880), recording 0>...
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2017-05-23 17:17:52  progressbar:97          45% complete, 27m 50s elapsed, 33m 56s remaining. 205010 spikes found.
2017-05-23 17:17:52  main:222                Processing chunk <Chunk (60735100/134804880), recording 0>...
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2017-05-23 17:24:26  progressbar:97          53% complete, 34m 24s elapsed, 29m 41s remaining. 262919 spikes found.
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2017-05-23 17:24:56  progressbar:97          54% complete, 34m 54s elapsed, 29m 27s remaining. 267570 spikes found.
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2017-05-23 17:25:26  progressbar:97          54% complete, 35m 24s elapsed, 29m 3s remaining. 271674 spikes found.
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2017-05-23 17:26:57  progressbar:97          56% complete, 36m 55s elapsed, 28m 8s remaining. 285156 spikes found.
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2017-05-23 17:27:27  progressbar:97          57% complete, 37m 25s elapsed, 27m 51s remaining. 289862 spikes found.
2017-05-23 17:27:27  main:222                Processing chunk <Chunk (77283100/134804880), recording 0>...
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2017-05-23 17:27:57  progressbar:97          58% complete, 37m 55s elapsed, 27m 23s remaining. 294032 spikes found.
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2017-05-23 17:31:29  progressbar:97          62% complete, 41m 27s elapsed, 24m 55s remaining. 325697 spikes found.
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2017-05-23 17:32:00  progressbar:97          63% complete, 41m 57s elapsed, 24m 33s remaining. 330434 spikes found.
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2017-05-23 17:32:30  progressbar:97          63% complete, 42m 27s elapsed, 23m 55s remaining. 334226 spikes found.
2017-05-23 17:32:30  main:222                Processing chunk <Chunk (86226900/134804880), recording 0>...
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2017-05-23 17:33:00  progressbar:97          64% complete, 42m 57s elapsed, 23m 41s remaining. 339327 spikes found.
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2017-05-23 17:33:30  progressbar:97          65% complete, 43m 28s elapsed, 23m 24s remaining. 344318 spikes found.
2017-05-23 17:33:30  main:222                Processing chunk <Chunk (87625600/134804880), recording 0>...
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2017-05-23 17:34:00  progressbar:97          65% complete, 43m 58s elapsed, 23m 7s remaining. 349406 spikes found.
2017-05-23 17:34:00  main:222                Processing chunk <Chunk (88334800/134804880), recording 0>...
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2017-05-23 17:34:30  progressbar:97          66% complete, 44m 28s elapsed, 22m 50s remaining. 354480 spikes found.
2017-05-23 17:34:30  main:222                Processing chunk <Chunk (89063700/134804880), recording 0>...
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2017-05-23 17:35:01  progressbar:97          66% complete, 44m 58s elapsed, 22m 33s remaining. 359426 spikes found.
2017-05-23 17:35:01  main:222                Processing chunk <Chunk (89772900/134804880), recording 0>...
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2017-05-23 17:35:31  progressbar:97          67% complete, 45m 29s elapsed, 22m 17s remaining. 364586 spikes found.
2017-05-23 17:35:31  main:222                Processing chunk <Chunk (90482100/134804880), recording 0>...
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2017-05-23 17:36:02  progressbar:97          67% complete, 45m 59s elapsed, 21m 59s remaining. 369570 spikes found.
2017-05-23 17:36:02  main:222                Processing chunk <Chunk (91191300/134804880), recording 0>...
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