2017-05-25 00:39:50  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170522_900um_936um_170522_151132/20170522_900um_936um_170522_151132.dat>
2017-05-25 00:39:50  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170522_900um_936um_170522_151132/6/20170522_900um_936um_170522_151132_sh6',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '6.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170522_900um_936um_170522_151132/20170522_900um_936um_170522_151132.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-05-25 00:40:08  main:200                Threshold: DoubleThreshold(strong=array([ 314.11462418,  327.8224857 ,  330.05635286,  168.21665718,
        320.10846043,  328.15277595,  315.19487207,  321.8912068 ,
        327.68522583,  326.5835509 ,  330.23741774,  350.91743359,
        325.06846579,  326.467039  ,  311.85589556,  328.53732945,
        306.64317453,  310.08749359,  303.66862296,  311.36230702,
        297.13386999,  295.60901241,  297.29116125,  295.70696339,
        303.00718613,  310.05168991,  313.53157853,  314.74693515,
        303.12764303,  323.89328472,  314.94961971,  299.20789983,
        273.8819567 ,  288.80836748,  286.11135081,  298.06700589,
        300.07166341,  285.33627522,  283.19093034,  279.37086256,
        275.91586756,  263.8562697 ,  257.74809917,  256.14686083,
        263.95854789,  252.59037528,  268.15334953,  274.9059475 ,
        284.71280405,  300.30723605,  284.09199762,  291.99552277,
        275.0474266 ,  291.45711141,  227.05541186,  222.89813356,
        236.43453904,  298.06805992,  283.30520275,  281.33283859,
        264.38149504,  288.0526095 ,  240.17544836,  238.04166039,
        296.68615685,  286.13069114,  286.13593514,  275.86905022,
        278.3263923 ,  275.0675086 ,  276.26952486,  271.70009369,
        279.96735022,  281.1986893 ,  278.32490015,  270.76811166,
        276.43488508,  274.10143611,  272.86867791,  276.04961463,
        222.11427956,  238.07134739,  251.98184466,  231.36720176,
        240.01479704,  271.63104944,  225.60143714,  223.54829933,
        288.48238452,  290.60890892,  283.80835002,  289.67232643,
        282.81300472,  279.90831627,  288.17556596,  284.99397615]), weak=array([ 139.60649964,  145.69888253,  146.69171238,   74.76295875,
        142.27042686,  145.8456782 ,  140.08660981,  143.06275858,
        145.63787815,  145.14824484,  146.77218566,  155.96330382,
        144.47487368,  145.09646178,  138.60262025,  146.01659087,
        136.28585535,  137.81666382,  134.96383243,  138.38324757,
        132.05949777,  131.38178329,  132.129405  ,  131.42531706,
        134.6698605 ,  137.80075107,  139.34736823,  139.88752673,
        134.7233969 ,  143.95257098,  139.97760876,  132.98128881,
        121.72531409,  128.35927444,  127.16060036,  132.47422484,
        133.36518374,  126.81612232,  125.86263571,  124.1648278 ,
        122.62927447,  117.2694532 ,  114.55471074,  113.84304926,
        117.31491017,  112.26238901,  119.17926646,  122.18042111,
        126.53902402,  133.46988269,  126.26311005,  129.7757879 ,
        122.24330071,  129.53649396,  100.91351638,   99.06583714,
        105.08201735,  132.4746933 ,  125.91342345,  125.03681715,
        117.50288668,  128.023382  ,  106.74464371,  105.79629351,
        131.86051416,  127.16919606,  127.17152673,  122.60846676,
        123.7006188 ,  122.25222604,  122.78645549,  120.75559719,
        124.42993343,  124.97719525,  123.69995562,  120.34138296,
        122.85994892,  121.82286049,  121.27496796,  122.68871761,
         98.71745758,  105.80948773,  111.99193096,  102.82986745,
        106.67324313,  120.72491086,  100.2673054 ,   99.3547997 ,
        128.21439312,  129.15951507,  126.13704445,  128.74325619,
        125.69466876,  124.40369612,  128.07802932,  126.6639894 ]))
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2017-05-25 00:44:11  progressbar:97          7% complete, 4m 2s elapsed, 50m 37s remaining. 12363 spikes found.
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2017-05-25 00:44:41  progressbar:97          8% complete, 4m 32s elapsed, 50m 49s remaining. 13871 spikes found.
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2017-05-25 00:46:11  progressbar:97          10% complete, 6m 3s elapsed, 50m 3s remaining. 18714 spikes found.
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2017-05-25 00:47:43  progressbar:97          13% complete, 7m 35s elapsed, 49m 45s remaining. 23298 spikes found.
2017-05-25 00:47:43  main:222                Processing chunk <Chunk (17828500/134804880), recording 0>...
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2017-05-25 00:48:14  progressbar:97          13% complete, 8m 5s elapsed, 49m 44s remaining. 24584 spikes found.
2017-05-25 00:48:14  main:222                Processing chunk <Chunk (18852900/134804880), recording 0>...
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2017-05-25 00:48:44  progressbar:97          14% complete, 8m 35s elapsed, 50m 14s remaining. 26093 spikes found.
2017-05-25 00:48:44  main:222                Processing chunk <Chunk (19680300/134804880), recording 0>...
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2017-05-25 00:49:14  progressbar:97          15% complete, 9m 5s elapsed, 50m 15s remaining. 27444 spikes found.
2017-05-25 00:49:14  main:222                Processing chunk <Chunk (20645600/134804880), recording 0>...
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2017-05-25 00:50:15  progressbar:97          16% complete, 10m 6s elapsed, 49m 51s remaining. 30195 spikes found.
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2017-05-25 00:51:16  progressbar:97          18% complete, 11m 7s elapsed, 48m 45s remaining. 33019 spikes found.
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2017-05-25 00:52:16  progressbar:97          20% complete, 12m 7s elapsed, 48m 11s remaining. 35354 spikes found.
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2017-05-25 00:52:46  progressbar:97          20% complete, 12m 37s elapsed, 47m 38s remaining. 36452 spikes found.
2017-05-25 00:52:46  main:222                Processing chunk <Chunk (28249800/134804880), recording 0>...
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2017-05-25 00:53:16  progressbar:97          21% complete, 13m 7s elapsed, 47m 15s remaining. 37351 spikes found.
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2017-05-25 00:54:17  progressbar:97          23% complete, 14m 8s elapsed, 45m 44s remaining. 40071 spikes found.
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2017-05-25 00:54:47  progressbar:97          24% complete, 14m 38s elapsed, 45m 14s remaining. 41830 spikes found.
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2017-05-25 00:55:17  progressbar:97          25% complete, 15m 8s elapsed, 45m 12s remaining. 44301 spikes found.
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2017-05-25 00:55:47  progressbar:97          25% complete, 15m 38s elapsed, 45m 20s remaining. 46687 spikes found.
2017-05-25 00:55:47  main:222                Processing chunk <Chunk (34593200/134804880), recording 0>...
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2017-05-25 00:56:18  progressbar:97          26% complete, 16m 9s elapsed, 45m 38s remaining. 49098 spikes found.
2017-05-25 00:56:18  main:222                Processing chunk <Chunk (35243300/134804880), recording 0>...
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2017-05-25 00:56:48  progressbar:97          26% complete, 16m 39s elapsed, 45m 39s remaining. 51928 spikes found.
2017-05-25 00:56:48  main:222                Processing chunk <Chunk (36031300/134804880), recording 0>...
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2017-05-25 00:57:18  progressbar:97          27% complete, 17m 9s elapsed, 45m 39s remaining. 54707 spikes found.
2017-05-25 00:57:18  main:222                Processing chunk <Chunk (36819300/134804880), recording 0>...
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2017-05-25 00:57:49  progressbar:97          27% complete, 17m 40s elapsed, 45m 47s remaining. 57314 spikes found.
2017-05-25 00:57:49  main:222                Processing chunk <Chunk (37548200/134804880), recording 0>...
2017-05-25 00:57:50  main:222                Processing chunk <Chunk (37567900/134804880), recording 0>...
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2017-05-25 00:58:20  progressbar:97          28% complete, 18m 11s elapsed, 45m 37s remaining. 59147 spikes found.
2017-05-25 00:58:20  main:222                Processing chunk <Chunk (38434700/134804880), recording 0>...
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2017-05-25 00:59:21  progressbar:97          29% complete, 19m 12s elapsed, 45m 11s remaining. 62463 spikes found.
2017-05-25 00:59:21  main:222                Processing chunk <Chunk (40207700/134804880), recording 0>...
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2017-05-25 00:59:51  progressbar:97          30% complete, 19m 42s elapsed, 44m 59s remaining. 64192 spikes found.
2017-05-25 00:59:51  main:222                Processing chunk <Chunk (41074500/134804880), recording 0>...
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2017-05-25 01:00:21  progressbar:97          31% complete, 20m 13s elapsed, 44m 36s remaining. 65351 spikes found.
2017-05-25 01:00:21  main:222                Processing chunk <Chunk (42039800/134804880), recording 0>...
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2017-05-25 01:00:52  progressbar:97          31% complete, 20m 44s elapsed, 44m 26s remaining. 68141 spikes found.
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2017-05-25 01:01:23  progressbar:97          32% complete, 21m 14s elapsed, 44m 7s remaining. 70457 spikes found.
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2017-05-25 01:01:53  progressbar:97          33% complete, 21m 44s elapsed, 44m 7s remaining. 72760 spikes found.
2017-05-25 01:01:53  main:222                Processing chunk <Chunk (44502300/134804880), recording 0>...
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2017-05-25 01:02:23  progressbar:97          33% complete, 22m 15s elapsed, 44m 14s remaining. 74979 spikes found.
2017-05-25 01:02:23  main:222                Processing chunk <Chunk (45113000/134804880), recording 0>...
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2017-05-25 01:02:54  progressbar:97          34% complete, 22m 45s elapsed, 44m 2s remaining. 76871 spikes found.
2017-05-25 01:02:54  main:222                Processing chunk <Chunk (45920700/134804880), recording 0>...
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2017-05-25 01:03:24  progressbar:97          34% complete, 23m 15s elapsed, 43m 47s remaining. 78632 spikes found.
2017-05-25 01:03:24  main:222                Processing chunk <Chunk (46767800/134804880), recording 0>...
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2017-05-25 01:03:55  progressbar:97          35% complete, 23m 46s elapsed, 43m 40s remaining. 80751 spikes found.
2017-05-25 01:03:55  main:222                Processing chunk <Chunk (47516400/134804880), recording 0>...
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2017-05-25 01:04:26  progressbar:97          35% complete, 24m 17s elapsed, 43m 36s remaining. 83005 spikes found.
2017-05-25 01:04:26  main:222                Processing chunk <Chunk (48225600/134804880), recording 0>...
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2017-05-25 01:04:56  progressbar:97          36% complete, 24m 47s elapsed, 43m 26s remaining. 85868 spikes found.
2017-05-25 01:04:56  main:222                Processing chunk <Chunk (48993900/134804880), recording 0>...
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2017-05-25 01:05:27  progressbar:97          36% complete, 25m 18s elapsed, 43m 8s remaining. 88521 spikes found.
2017-05-25 01:05:27  main:222                Processing chunk <Chunk (49841000/134804880), recording 0>...
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2017-05-25 01:05:57  progressbar:97          37% complete, 25m 49s elapsed, 42m 52s remaining. 91354 spikes found.
2017-05-25 01:05:57  main:222                Processing chunk <Chunk (50668400/134804880), recording 0>...
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2017-05-25 01:06:28  progressbar:97          38% complete, 26m 19s elapsed, 42m 49s remaining. 93763 spikes found.
2017-05-25 01:06:28  main:222                Processing chunk <Chunk (51318500/134804880), recording 0>...
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2017-05-25 01:06:58  progressbar:97          38% complete, 26m 49s elapsed, 42m 35s remaining. 95473 spikes found.
2017-05-25 01:06:58  main:222                Processing chunk <Chunk (52086800/134804880), recording 0>...
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2017-05-25 01:07:28  progressbar:97          39% complete, 27m 19s elapsed, 42m 16s remaining. 97469 spikes found.
2017-05-25 01:07:28  main:222                Processing chunk <Chunk (52933900/134804880), recording 0>...
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2017-05-25 01:07:58  progressbar:97          39% complete, 27m 50s elapsed, 42m 7s remaining. 99645 spikes found.
2017-05-25 01:07:58  main:222                Processing chunk <Chunk (53643100/134804880), recording 0>...
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2017-05-25 01:08:29  progressbar:97          40% complete, 28m 20s elapsed, 42m 4s remaining. 101817 spikes found.
2017-05-25 01:08:29  main:222                Processing chunk <Chunk (54253800/134804880), recording 0>...
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2017-05-25 01:08:59  progressbar:97          40% complete, 28m 51s elapsed, 41m 53s remaining. 104016 spikes found.
2017-05-25 01:08:59  main:222                Processing chunk <Chunk (54982700/134804880), recording 0>...
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2017-05-25 01:09:30  progressbar:97          41% complete, 29m 21s elapsed, 41m 33s remaining. 106723 spikes found.
2017-05-25 01:09:30  main:222                Processing chunk <Chunk (55810100/134804880), recording 0>...
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2017-05-25 01:10:00  progressbar:97          42% complete, 29m 51s elapsed, 41m 10s remaining. 109313 spikes found.
2017-05-25 01:10:00  main:222                Processing chunk <Chunk (56676900/134804880), recording 0>...
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2017-05-25 01:10:31  progressbar:97          42% complete, 30m 22s elapsed, 40m 51s remaining. 112072 spikes found.
2017-05-25 01:10:31  main:222                Processing chunk <Chunk (57484600/134804880), recording 0>...
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2017-05-25 01:11:01  progressbar:97          43% complete, 30m 52s elapsed, 40m 41s remaining. 114423 spikes found.
2017-05-25 01:11:01  main:222                Processing chunk <Chunk (58154400/134804880), recording 0>...
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2017-05-25 01:11:32  progressbar:97          43% complete, 31m 23s elapsed, 40m 31s remaining. 116608 spikes found.
2017-05-25 01:11:32  main:222                Processing chunk <Chunk (58843900/134804880), recording 0>...
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2017-05-25 01:12:02  progressbar:97          44% complete, 31m 53s elapsed, 40m 17s remaining. 118681 spikes found.
2017-05-25 01:12:02  main:222                Processing chunk <Chunk (59553100/134804880), recording 0>...
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2017-05-25 01:12:33  progressbar:97          44% complete, 32m 24s elapsed, 39m 58s remaining. 120910 spikes found.
2017-05-25 01:12:33  main:222                Processing chunk <Chunk (60360800/134804880), recording 0>...
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2017-05-25 01:15:05  progressbar:97          48% complete, 34m 56s elapsed, 36m 59s remaining. 133399 spikes found.
2017-05-25 01:15:05  main:222                Processing chunk <Chunk (65482800/134804880), recording 0>...
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2017-05-25 01:15:36  progressbar:97          49% complete, 35m 28s elapsed, 36m 29s remaining. 136297 spikes found.
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2017-05-25 01:16:07  progressbar:97          49% complete, 35m 59s elapsed, 36m 9s remaining. 138431 spikes found.
2017-05-25 01:16:07  main:222                Processing chunk <Chunk (67236100/134804880), recording 0>...
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2017-05-25 01:16:39  progressbar:97          50% complete, 36m 30s elapsed, 35m 52s remaining. 140528 spikes found.
2017-05-25 01:16:39  main:222                Processing chunk <Chunk (67984700/134804880), recording 0>...
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2017-05-25 01:17:09  progressbar:97          50% complete, 37m 0s elapsed, 35m 34s remaining. 142677 spikes found.
2017-05-25 01:17:09  main:222                Processing chunk <Chunk (68733300/134804880), recording 0>...
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2017-05-25 01:17:40  progressbar:97          51% complete, 37m 31s elapsed, 35m 18s remaining. 144835 spikes found.
2017-05-25 01:17:40  main:222                Processing chunk <Chunk (69462200/134804880), recording 0>...
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2017-05-25 01:19:12  progressbar:97          53% complete, 39m 3s elapsed, 33m 58s remaining. 152305 spikes found.
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2017-05-25 01:19:42  progressbar:97          54% complete, 39m 34s elapsed, 33m 35s remaining. 154995 spikes found.
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2017-05-25 01:20:13  progressbar:97          54% complete, 40m 4s elapsed, 33m 15s remaining. 157086 spikes found.
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2017-05-25 01:21:14  progressbar:97          55% complete, 41m 5s elapsed, 32m 44s remaining. 161300 spikes found.
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2017-05-25 01:21:44  progressbar:97          56% complete, 41m 35s elapsed, 32m 25s remaining. 163214 spikes found.
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2017-05-25 01:22:15  progressbar:97          56% complete, 42m 6s elapsed, 32m 8s remaining. 165294 spikes found.
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2017-05-25 01:22:45  progressbar:97          57% complete, 42m 36s elapsed, 31m 47s remaining. 167421 spikes found.
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2017-05-25 01:23:15  progressbar:97          57% complete, 43m 6s elapsed, 31m 18s remaining. 169422 spikes found.
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2017-05-25 01:23:46  main:222                Processing chunk <Chunk (78918200/134804880), recording 0>...
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2017-05-25 01:24:16  progressbar:97          59% complete, 44m 7s elapsed, 30m 30s remaining. 173729 spikes found.
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2017-05-25 01:24:46  progressbar:97          59% complete, 44m 37s elapsed, 30m 5s remaining. 175923 spikes found.
2017-05-25 01:24:46  main:222                Processing chunk <Chunk (80513900/134804880), recording 0>...
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2017-05-25 01:25:16  progressbar:97          60% complete, 45m 8s elapsed, 29m 38s remaining. 178240 spikes found.
2017-05-25 01:25:16  main:222                Processing chunk <Chunk (81361000/134804880), recording 0>...
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2017-05-25 01:25:47  progressbar:97          60% complete, 45m 38s elapsed, 29m 12s remaining. 180449 spikes found.
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2017-05-25 01:29:52  progressbar:97          66% complete, 49m 43s elapsed, 25m 14s remaining. 200049 spikes found.
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2017-05-25 01:36:25  progressbar:97          76% complete, 56m 16s elapsed, 17m 46s remaining. 225242 spikes found.
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2017-05-25 01:36:56  progressbar:97          76% complete, 56m 47s elapsed, 17m 2s remaining. 227147 spikes found.
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