2017-05-24 23:34:23  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170522_900um_936um_170522_151132/20170522_900um_936um_170522_151132.dat>
2017-05-24 23:34:23  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170522_900um_936um_170522_151132/7/20170522_900um_936um_170522_151132_sh7',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '7.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170522_900um_936um_170522_151132/20170522_900um_936um_170522_151132.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-05-24 23:34:48  main:200                Threshold: DoubleThreshold(strong=array([ 314.11462418,  327.8224857 ,  330.05635286,  168.21665718,
        320.10846043,  328.15277595,  315.19487207,  321.8912068 ,
        327.68522583,  326.5835509 ,  330.23741774,  350.91743359,
        325.06846579,  326.467039  ,  311.85589556,  328.53732945,
        306.64317453,  310.08749359,  303.66862296,  311.36230702,
        297.13386999,  295.60901241,  297.29116125,  295.70696339,
        303.00718613,  310.05168991,  313.53157853,  314.74693515,
        303.12764303,  323.89328472,  314.94961971,  299.20789983,
        273.8819567 ,  288.80836748,  286.11135081,  298.06700589,
        300.07166341,  285.33627522,  283.19093034,  279.37086256,
        275.91586756,  263.8562697 ,  257.74809917,  256.14686083,
        263.95854789,  252.59037528,  268.15334953,  274.9059475 ,
        284.71280405,  300.30723605,  284.09199762,  291.99552277,
        275.0474266 ,  291.45711141,  227.05541186,  222.89813356,
        236.43453904,  298.06805992,  283.30520275,  281.33283859,
        264.38149504,  288.0526095 ,  240.17544836,  238.04166039,
        296.68615685,  286.13069114,  286.13593514,  275.86905022,
        278.3263923 ,  275.0675086 ,  276.26952486,  271.70009369,
        279.96735022,  281.1986893 ,  278.32490015,  270.76811166,
        276.43488508,  274.10143611,  272.86867791,  276.04961463,
        222.11427956,  238.07134739,  251.98184466,  231.36720176,
        240.01479704,  271.63104944,  225.60143714,  223.54829933,
        288.48238452,  290.60890892,  283.80835002,  289.67232643,
        282.81300472,  279.90831627,  288.17556596,  284.99397615]), weak=array([ 139.60649964,  145.69888253,  146.69171238,   74.76295875,
        142.27042686,  145.8456782 ,  140.08660981,  143.06275858,
        145.63787815,  145.14824484,  146.77218566,  155.96330382,
        144.47487368,  145.09646178,  138.60262025,  146.01659087,
        136.28585535,  137.81666382,  134.96383243,  138.38324757,
        132.05949777,  131.38178329,  132.129405  ,  131.42531706,
        134.6698605 ,  137.80075107,  139.34736823,  139.88752673,
        134.7233969 ,  143.95257098,  139.97760876,  132.98128881,
        121.72531409,  128.35927444,  127.16060036,  132.47422484,
        133.36518374,  126.81612232,  125.86263571,  124.1648278 ,
        122.62927447,  117.2694532 ,  114.55471074,  113.84304926,
        117.31491017,  112.26238901,  119.17926646,  122.18042111,
        126.53902402,  133.46988269,  126.26311005,  129.7757879 ,
        122.24330071,  129.53649396,  100.91351638,   99.06583714,
        105.08201735,  132.4746933 ,  125.91342345,  125.03681715,
        117.50288668,  128.023382  ,  106.74464371,  105.79629351,
        131.86051416,  127.16919606,  127.17152673,  122.60846676,
        123.7006188 ,  122.25222604,  122.78645549,  120.75559719,
        124.42993343,  124.97719525,  123.69995562,  120.34138296,
        122.85994892,  121.82286049,  121.27496796,  122.68871761,
         98.71745758,  105.80948773,  111.99193096,  102.82986745,
        106.67324313,  120.72491086,  100.2673054 ,   99.3547997 ,
        128.21439312,  129.15951507,  126.13704445,  128.74325619,
        125.69466876,  124.40369612,  128.07802932,  126.6639894 ]))
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2017-05-24 23:40:52  progressbar:97          10% complete, 6m 4s elapsed, 51m 23s remaining. 33250 spikes found.
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2017-05-24 23:41:22  progressbar:97          11% complete, 6m 34s elapsed, 51m 18s remaining. 35841 spikes found.
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2017-05-24 23:41:52  progressbar:97          12% complete, 7m 4s elapsed, 50m 55s remaining. 38765 spikes found.
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2017-05-24 23:43:53  progressbar:97          14% complete, 9m 5s elapsed, 51m 38s remaining. 48874 spikes found.
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2017-05-24 23:44:53  progressbar:97          16% complete, 10m 5s elapsed, 50m 26s remaining. 53646 spikes found.
2017-05-24 23:44:53  main:222                Processing chunk <Chunk (22477700/134804880), recording 0>...
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2017-05-24 23:45:24  progressbar:97          17% complete, 10m 35s elapsed, 50m 17s remaining. 56220 spikes found.
2017-05-24 23:45:24  main:222                Processing chunk <Chunk (23462700/134804880), recording 0>...
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2017-05-24 23:45:54  progressbar:97          18% complete, 11m 6s elapsed, 49m 57s remaining. 58667 spikes found.
2017-05-24 23:45:54  main:222                Processing chunk <Chunk (24506800/134804880), recording 0>...
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2017-05-24 23:49:56  progressbar:97          24% complete, 15m 8s elapsed, 46m 36s remaining. 78918 spikes found.
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2017-05-24 23:50:57  progressbar:97          25% complete, 16m 9s elapsed, 47m 3s remaining. 85145 spikes found.
2017-05-24 23:50:57  main:222                Processing chunk <Chunk (34455300/134804880), recording 0>...
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2017-05-24 23:51:28  progressbar:97          26% complete, 16m 39s elapsed, 47m 21s remaining. 88260 spikes found.
2017-05-24 23:51:28  main:222                Processing chunk <Chunk (35085700/134804880), recording 0>...
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2017-05-24 23:51:59  progressbar:97          26% complete, 17m 10s elapsed, 47m 35s remaining. 91883 spikes found.
2017-05-24 23:51:59  main:222                Processing chunk <Chunk (35755500/134804880), recording 0>...
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2017-05-24 23:52:29  progressbar:97          27% complete, 17m 41s elapsed, 47m 41s remaining. 95403 spikes found.
2017-05-24 23:52:29  main:222                Processing chunk <Chunk (36464700/134804880), recording 0>...
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2017-05-24 23:53:00  progressbar:97          27% complete, 18m 11s elapsed, 47m 49s remaining. 98417 spikes found.
2017-05-24 23:53:00  main:222                Processing chunk <Chunk (37154200/134804880), recording 0>...
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2017-05-24 23:53:30  progressbar:97          28% complete, 18m 42s elapsed, 47m 50s remaining. 101612 spikes found.
2017-05-24 23:53:30  main:222                Processing chunk <Chunk (37883100/134804880), recording 0>...
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2017-05-24 23:58:03  progressbar:97          34% complete, 23m 15s elapsed, 44m 3s remaining. 132389 spikes found.
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2017-05-24 23:59:04  progressbar:97          35% complete, 24m 16s elapsed, 43m 42s remaining. 138702 spikes found.
2017-05-24 23:59:04  main:222                Processing chunk <Chunk (48127100/134804880), recording 0>...
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2017-05-24 23:59:35  progressbar:97          36% complete, 24m 47s elapsed, 43m 37s remaining. 142033 spikes found.
2017-05-24 23:59:35  main:222                Processing chunk <Chunk (48836300/134804880), recording 0>...
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2017-05-25 00:00:05  progressbar:97          36% complete, 25m 17s elapsed, 43m 21s remaining. 145307 spikes found.
2017-05-25 00:00:05  main:222                Processing chunk <Chunk (49663700/134804880), recording 0>...
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2017-05-25 00:00:36  progressbar:97          37% complete, 25m 47s elapsed, 43m 14s remaining. 148413 spikes found.
2017-05-25 00:00:36  main:222                Processing chunk <Chunk (50372900/134804880), recording 0>...
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2017-05-25 00:01:06  progressbar:97          37% complete, 26m 18s elapsed, 43m 8s remaining. 151577 spikes found.
2017-05-25 00:01:06  main:222                Processing chunk <Chunk (51062400/134804880), recording 0>...
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2017-05-25 00:01:36  progressbar:97          38% complete, 26m 48s elapsed, 43m 2s remaining. 154109 spikes found.
2017-05-25 00:01:36  main:222                Processing chunk <Chunk (51732200/134804880), recording 0>...
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2017-05-25 00:02:07  progressbar:97          39% complete, 27m 19s elapsed, 42m 38s remaining. 156753 spikes found.
2017-05-25 00:02:07  main:222                Processing chunk <Chunk (52638400/134804880), recording 0>...
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2017-05-25 00:02:37  progressbar:97          39% complete, 27m 49s elapsed, 42m 24s remaining. 160046 spikes found.
2017-05-25 00:02:37  main:222                Processing chunk <Chunk (53406700/134804880), recording 0>...
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2017-05-25 00:03:08  progressbar:97          40% complete, 28m 20s elapsed, 42m 12s remaining. 163713 spikes found.
2017-05-25 00:03:08  main:222                Processing chunk <Chunk (54155300/134804880), recording 0>...
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2017-05-25 00:03:39  progressbar:97          40% complete, 28m 50s elapsed, 41m 54s remaining. 167147 spikes found.
2017-05-25 00:03:39  main:222                Processing chunk <Chunk (54963000/134804880), recording 0>...
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2017-05-25 00:04:09  progressbar:97          41% complete, 29m 21s elapsed, 41m 46s remaining. 170190 spikes found.
2017-05-25 00:04:09  main:222                Processing chunk <Chunk (55632800/134804880), recording 0>...
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2017-05-25 00:04:40  progressbar:97          41% complete, 29m 52s elapsed, 41m 34s remaining. 173456 spikes found.
2017-05-25 00:04:40  main:222                Processing chunk <Chunk (56361700/134804880), recording 0>...
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2017-05-25 00:05:11  progressbar:97          42% complete, 30m 22s elapsed, 41m 13s remaining. 176957 spikes found.
2017-05-25 00:05:11  main:222                Processing chunk <Chunk (57189100/134804880), recording 0>...
2017-05-25 00:05:11  main:222                Processing chunk <Chunk (57208800/134804880), recording 0>...
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2017-05-25 00:05:40  main:222                Processing chunk <Chunk (57898300/134804880), recording 0>...
2017-05-25 00:05:41  progressbar:97          42% complete, 30m 52s elapsed, 40m 59s remaining. 180023 spikes found.
2017-05-25 00:05:41  main:222                Processing chunk <Chunk (57918000/134804880), recording 0>...
2017-05-25 00:05:41  main:222                Processing chunk <Chunk (57937700/134804880), recording 0>...
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2017-05-25 00:06:10  main:222                Processing chunk <Chunk (58706000/134804880), recording 0>...
2017-05-25 00:06:11  progressbar:97          43% complete, 31m 23s elapsed, 40m 39s remaining. 183427 spikes found.
2017-05-25 00:06:11  main:222                Processing chunk <Chunk (58725700/134804880), recording 0>...
2017-05-25 00:06:12  main:222                Processing chunk <Chunk (58745400/134804880), recording 0>...
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2017-05-25 00:06:41  main:222                Processing chunk <Chunk (59434900/134804880), recording 0>...
2017-05-25 00:06:42  progressbar:97          44% complete, 31m 54s elapsed, 40m 26s remaining. 186219 spikes found.
2017-05-25 00:06:42  main:222                Processing chunk <Chunk (59454600/134804880), recording 0>...
2017-05-25 00:06:43  main:222                Processing chunk <Chunk (59474300/134804880), recording 0>...
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2017-05-25 00:06:57  main:222                Processing chunk <Chunk (59828900/134804880), recording 0>...
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2017-05-25 00:07:12  progressbar:97          44% complete, 32m 24s elapsed, 40m 7s remaining. 189555 spikes found.
2017-05-25 00:07:12  main:222                Processing chunk <Chunk (60222900/134804880), recording 0>...
2017-05-25 00:07:13  main:222                Processing chunk <Chunk (60242600/134804880), recording 0>...
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2017-05-25 00:07:42  progressbar:97          45% complete, 32m 54s elapsed, 39m 49s remaining. 192977 spikes found.
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2017-05-25 00:08:13  progressbar:97          46% complete, 33m 25s elapsed, 39m 6s remaining. 196345 spikes found.
2017-05-25 00:08:13  main:222                Processing chunk <Chunk (62114100/134804880), recording 0>...
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2017-05-25 00:08:43  progressbar:97          46% complete, 33m 55s elapsed, 38m 28s remaining. 199760 spikes found.
2017-05-25 00:08:43  main:222                Processing chunk <Chunk (63158200/134804880), recording 0>...
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2017-05-25 00:09:14  progressbar:97          47% complete, 34m 25s elapsed, 37m 59s remaining. 203136 spikes found.
2017-05-25 00:09:14  main:222                Processing chunk <Chunk (64084100/134804880), recording 0>...
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2017-05-25 00:09:44  progressbar:97          48% complete, 34m 56s elapsed, 37m 38s remaining. 206383 spikes found.
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2017-05-25 00:10:14  progressbar:97          48% complete, 35m 26s elapsed, 37m 20s remaining. 209392 spikes found.
2017-05-25 00:10:14  main:222                Processing chunk <Chunk (65640400/134804880), recording 0>...
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2017-05-25 00:10:45  progressbar:97          49% complete, 35m 56s elapsed, 37m 3s remaining. 212344 spikes found.
2017-05-25 00:10:45  main:222                Processing chunk <Chunk (66369300/134804880), recording 0>...
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2017-05-25 00:11:15  progressbar:97          49% complete, 36m 27s elapsed, 36m 44s remaining. 215263 spikes found.
2017-05-25 00:11:15  main:222                Processing chunk <Chunk (67137600/134804880), recording 0>...
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2017-05-25 00:11:45  progressbar:97          50% complete, 36m 57s elapsed, 36m 25s remaining. 218368 spikes found.
2017-05-25 00:11:45  main:222                Processing chunk <Chunk (67886200/134804880), recording 0>...
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2017-05-25 00:12:15  progressbar:97          50% complete, 37m 27s elapsed, 36m 3s remaining. 221699 spikes found.
2017-05-25 00:12:15  main:222                Processing chunk <Chunk (68693900/134804880), recording 0>...
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2017-05-25 00:12:45  progressbar:97          51% complete, 37m 57s elapsed, 35m 40s remaining. 224864 spikes found.
2017-05-25 00:12:45  main:222                Processing chunk <Chunk (69501600/134804880), recording 0>...
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2017-05-25 00:13:16  progressbar:97          52% complete, 38m 28s elapsed, 35m 21s remaining. 227951 spikes found.
2017-05-25 00:13:16  main:222                Processing chunk <Chunk (70250200/134804880), recording 0>...
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2017-05-25 00:13:46  progressbar:97          52% complete, 38m 58s elapsed, 35m 1s remaining. 230793 spikes found.
2017-05-25 00:13:46  main:222                Processing chunk <Chunk (70998800/134804880), recording 0>...
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2017-05-25 00:14:17  progressbar:97          53% complete, 39m 28s elapsed, 34m 38s remaining. 233354 spikes found.
2017-05-25 00:14:17  main:222                Processing chunk <Chunk (71806500/134804880), recording 0>...
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2017-05-25 00:14:47  progressbar:97          53% complete, 39m 59s elapsed, 34m 16s remaining. 236748 spikes found.
2017-05-25 00:14:47  main:222                Processing chunk <Chunk (72594500/134804880), recording 0>...
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2017-05-25 00:15:18  progressbar:97          54% complete, 40m 29s elapsed, 33m 41s remaining. 240598 spikes found.
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2017-05-25 00:16:19  progressbar:97          55% complete, 41m 31s elapsed, 32m 53s remaining. 247783 spikes found.
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2017-05-25 00:16:50  progressbar:97          56% complete, 42m 1s elapsed, 32m 28s remaining. 251063 spikes found.
2017-05-25 00:16:50  main:222                Processing chunk <Chunk (76042000/134804880), recording 0>...
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2017-05-25 00:17:20  progressbar:97          57% complete, 42m 32s elapsed, 32m 4s remaining. 254342 spikes found.
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2017-05-25 00:17:50  progressbar:97          57% complete, 43m 2s elapsed, 31m 41s remaining. 257938 spikes found.
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2017-05-25 00:18:52  progressbar:97          58% complete, 44m 4s elapsed, 30m 43s remaining. 265037 spikes found.
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2017-05-25 00:19:22  progressbar:97          59% complete, 44m 34s elapsed, 30m 15s remaining. 268176 spikes found.
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2017-05-25 00:19:53  progressbar:97          60% complete, 45m 5s elapsed, 29m 57s remaining. 271228 spikes found.
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2017-05-25 00:20:24  progressbar:97          60% complete, 45m 36s elapsed, 29m 34s remaining. 274126 spikes found.
2017-05-25 00:20:24  main:222                Processing chunk <Chunk (81774700/134804880), recording 0>...
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2017-05-25 00:20:54  progressbar:97          61% complete, 46m 6s elapsed, 29m 12s remaining. 276916 spikes found.
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2017-05-25 00:22:26  progressbar:97          62% complete, 47m 38s elapsed, 27m 58s remaining. 285925 spikes found.
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2017-05-25 00:23:57  progressbar:97          64% complete, 49m 9s elapsed, 26m 42s remaining. 294765 spikes found.
2017-05-25 00:23:57  main:222                Processing chunk <Chunk (87349800/134804880), recording 0>...
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2017-05-25 00:24:27  progressbar:97          65% complete, 49m 39s elapsed, 26m 21s remaining. 297722 spikes found.
2017-05-25 00:24:27  main:222                Processing chunk <Chunk (88059000/134804880), recording 0>...
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2017-05-25 00:24:58  progressbar:97          65% complete, 50m 10s elapsed, 26m 2s remaining. 300722 spikes found.
2017-05-25 00:24:58  main:222                Processing chunk <Chunk (88748500/134804880), recording 0>...
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2017-05-25 00:25:28  progressbar:97          66% complete, 50m 40s elapsed, 25m 36s remaining. 303933 spikes found.
2017-05-25 00:25:28  main:222                Processing chunk <Chunk (89556200/134804880), recording 0>...
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2017-05-25 00:25:59  progressbar:97          67% complete, 51m 11s elapsed, 25m 10s remaining. 307496 spikes found.
2017-05-25 00:25:59  main:222                Processing chunk <Chunk (90363900/134804880), recording 0>...
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2017-05-25 00:26:29  progressbar:97          67% complete, 51m 41s elapsed, 24m 46s remaining. 310394 spikes found.
2017-05-25 00:26:29  main:222                Processing chunk <Chunk (91132200/134804880), recording 0>...
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2017-05-25 00:27:00  progressbar:97          68% complete, 52m 12s elapsed, 24m 25s remaining. 313188 spikes found.
2017-05-25 00:27:00  main:222                Processing chunk <Chunk (91841400/134804880), recording 0>...
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2017-05-25 00:27:30  progressbar:97          68% complete, 52m 42s elapsed, 24m 5s remaining. 315796 spikes found.
2017-05-25 00:27:30  main:222                Processing chunk <Chunk (92511200/134804880), recording 0>...
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2017-05-25 00:28:00  progressbar:97          69% complete, 53m 12s elapsed, 23m 42s remaining. 318511 spikes found.
2017-05-25 00:28:00  main:222                Processing chunk <Chunk (93259800/134804880), recording 0>...
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2017-05-25 00:28:31  progressbar:97          69% complete, 53m 43s elapsed, 23m 16s remaining. 321622 spikes found.
2017-05-25 00:28:31  main:222                Processing chunk <Chunk (94047800/134804880), recording 0>...
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2017-05-25 00:29:01  progressbar:97          70% complete, 54m 13s elapsed, 22m 32s remaining. 324303 spikes found.
2017-05-25 00:29:01  main:222                Processing chunk <Chunk (95210100/134804880), recording 0>...
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2017-05-25 00:43:38  progressbar:97          98% complete, 1h 8m 49s elapsed, 54s remaining. 401503 spikes found.
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2017-05-25 00:44:08  progressbar:97          99% complete, 1h 9m 20s elapsed, 10s remaining. 404284 spikes found.
2017-05-25 00:44:08  main:222                Processing chunk <Chunk (134452500/134804880), recording 0>...
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2017-05-25 00:44:17  progressbar:97          100% complete, 1h 9m 28s elapsed, 0s remaining. 404855 spikes found.