2017-05-30 11:19:10  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170525_900um_936um_170525_150124/20170525_900um_936um_170525_150124.dat>
2017-05-30 11:19:10  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170525_900um_936um_170525_150124/10/20170525_900um_936um_170525_150124_sh10',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '10.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170525_900um_936um_170525_150124/20170525_900um_936um_170525_150124.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-05-30 11:20:17  main:200                Threshold: DoubleThreshold(strong=array([ 292.88499156,  304.09357775,  317.7097731 ,  155.22094229,
        299.4712243 ,  307.79612975,  304.84975125,  301.38405124,
        301.29887758,  301.55111999,  301.75742301,  315.72179077,
        305.45817574,  319.70013836,  305.41988653,  309.29167855,
        294.08658203,  290.19427331,  287.93442134,  285.63455499,
        283.02062439,  284.1549173 ,  271.97360669,  275.64318029,
        286.40914964,  296.58385799,  298.16258903,  291.74306795,
        289.90923597,  300.09333258,  302.53002471,  294.83005219,
        285.19300762,  278.60678893,  277.1425438 ,  284.68655434,
        282.94198111,  283.80357444,  280.48166331,  294.8297283 ,
        245.5462831 ,  241.5016578 ,  254.18981571,  262.59251287,
        271.93825572,  253.50013489,  247.65703134,  251.75049264,
        260.61787994,  275.21515561,  256.49722134,  271.98496771,
        255.13702364,  256.39971861,  257.60820952,  227.18305482,
        273.72986832,  252.19790505,  274.03258383,  266.10346395,
        269.27751498,  269.33897   ,  262.12949524,  279.53989188,
        278.5421821 ,  268.08923135,  269.17538449,  262.75139224,
        256.10735057,  250.72900687,  255.06479014,  259.29930123,
        264.09292249,  266.73669355,  259.02715461,  255.84344101,
        260.89905641,  265.2175779 ,  253.61287405,  256.07513776,
        232.38524409,  224.84335262,  243.35479317,  234.78621148,
        220.35517147,  253.69475919,  209.01622835,  213.40073146,
        271.74318434,  277.46110537,  260.53523254,  266.81458008,
        263.62422302,  256.5495267 ,  263.26562518,  264.63460535]), weak=array([ 130.17110736,  135.15270122,  141.2043436 ,   68.98708546,
        133.09832191,  136.79827989,  135.48877833,  133.94846722,
        133.91061226,  134.02272   ,  134.11441023,  140.3207959 ,
        135.75918922,  142.08895038,  135.74217179,  137.46296824,
        130.70514757,  128.97523258,  127.97085393,  126.94869111,
        125.78694417,  126.29107436,  120.87715853,  122.50808013,
        127.29295539,  131.815048  ,  132.51670623,  129.66358575,
        128.84854932,  133.37481448,  134.45778876,  131.03557875,
        126.75244783,  123.82523952,  123.17446391,  126.52735748,
        125.75199161,  126.13492197,  124.65851703,  131.0354348 ,
        109.13168138,  107.33407013,  112.97325143,  116.7077835 ,
        120.86144698,  112.66672662,  110.06979171,  111.88910784,
        115.83016886,  122.31784694,  113.99876504,  120.88220787,
        113.39423273,  113.95543049,  114.49253756,  100.97024659,
        121.65771925,  112.0879578 ,  121.79225948,  118.2682062 ,
        119.67889554,  119.70620889,  116.50199789,  124.23995195,
        123.79652538,  119.15076949,  119.63350422,  116.77839655,
        113.82548914,  111.43511416,  113.36212895,  115.24413388,
        117.37463222,  118.54964158,  115.12317983,  113.70819601,
        115.95513618,  117.87447907,  112.71683291,  113.81117234,
        103.28233071,   99.93037894,  108.15768585,  104.34942733,
         97.93563176,  112.75322631,   92.89610149,   94.84476954,
        120.7747486 ,  123.31604683,  115.79343668,  118.58425781,
        117.16632134,  114.02201186,  117.00694452,  117.61538015]))
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2017-05-30 11:26:22  progressbar:97          7% complete, 6m 5s elapsed, 1h 14m 39s remaining. 29110 spikes found.
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2017-05-30 11:26:52  progressbar:97          8% complete, 6m 35s elapsed, 1h 15m 0s remaining. 31077 spikes found.
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2017-05-30 11:28:23  progressbar:97          9% complete, 8m 6s elapsed, 1h 13m 5s remaining. 36177 spikes found.
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2017-05-30 11:28:54  progressbar:97          10% complete, 8m 36s elapsed, 1h 12m 44s remaining. 37460 spikes found.
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2017-05-30 11:29:24  progressbar:97          11% complete, 9m 7s elapsed, 1h 12m 46s remaining. 39826 spikes found.
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2017-05-30 11:33:57  progressbar:97          16% complete, 13m 39s elapsed, 1h 8m 35s remaining. 56702 spikes found.
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2017-05-30 11:34:27  progressbar:97          17% complete, 14m 10s elapsed, 1h 8m 1s remaining. 59136 spikes found.
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2017-05-30 11:37:29  progressbar:97          21% complete, 17m 11s elapsed, 1h 4m 27s remaining. 69360 spikes found.
2017-05-30 11:37:29  main:222                Processing chunk <Chunk (30219800/143507520), recording 0>...
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2017-05-30 11:37:59  progressbar:97          21% complete, 17m 41s elapsed, 1h 4m 9s remaining. 71535 spikes found.
2017-05-30 11:37:59  main:222                Processing chunk <Chunk (31027500/143507520), recording 0>...
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2017-05-30 11:38:29  progressbar:97          22% complete, 18m 12s elapsed, 1h 3m 45s remaining. 73232 spikes found.
2017-05-30 11:38:29  main:222                Processing chunk <Chunk (31874600/143507520), recording 0>...
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2017-05-30 11:39:00  progressbar:97          22% complete, 18m 42s elapsed, 1h 3m 20s remaining. 75140 spikes found.
2017-05-30 11:39:00  main:222                Processing chunk <Chunk (32721700/143507520), recording 0>...
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2017-05-30 11:39:30  progressbar:97          23% complete, 19m 12s elapsed, 1h 2m 58s remaining. 77066 spikes found.
2017-05-30 11:39:30  main:222                Processing chunk <Chunk (33549100/143507520), recording 0>...
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2017-05-30 11:40:31  progressbar:97          24% complete, 20m 14s elapsed, 1h 2m 4s remaining. 80709 spikes found.
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2017-05-30 11:41:02  progressbar:97          25% complete, 20m 44s elapsed, 1h 1m 47s remaining. 82512 spikes found.
2017-05-30 11:41:02  main:222                Processing chunk <Chunk (36070700/143507520), recording 0>...
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2017-05-30 11:41:32  progressbar:97          25% complete, 21m 15s elapsed, 1h 1m 16s remaining. 84389 spikes found.
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2017-05-30 11:42:02  progressbar:97          26% complete, 21m 45s elapsed, 1h 0m 54s remaining. 86368 spikes found.
2017-05-30 11:42:02  main:222                Processing chunk <Chunk (37764900/143507520), recording 0>...
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2017-05-30 11:43:03  progressbar:97          27% complete, 22m 45s elapsed, 59m 9s remaining. 90514 spikes found.
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2017-05-30 11:44:03  progressbar:97          29% complete, 23m 45s elapsed, 57m 14s remaining. 94135 spikes found.
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2017-05-30 11:47:05  progressbar:97          34% complete, 26m 47s elapsed, 51m 1s remaining. 102579 spikes found.
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2017-05-30 11:47:35  progressbar:97          35% complete, 27m 17s elapsed, 50m 24s remaining. 105244 spikes found.
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2017-05-30 11:48:05  progressbar:97          35% complete, 27m 48s elapsed, 49m 42s remaining. 107606 spikes found.
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2017-05-30 11:49:06  progressbar:97          37% complete, 28m 48s elapsed, 48m 29s remaining. 112530 spikes found.
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2017-05-30 11:49:36  progressbar:97          37% complete, 29m 18s elapsed, 47m 53s remaining. 115953 spikes found.
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2017-05-30 11:50:06  progressbar:97          38% complete, 29m 49s elapsed, 47m 17s remaining. 119050 spikes found.
2017-05-30 11:50:06  main:222                Processing chunk <Chunk (55494900/143507520), recording 0>...
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2017-05-30 11:50:36  progressbar:97          39% complete, 30m 19s elapsed, 46m 46s remaining. 121861 spikes found.
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2017-05-30 11:51:07  progressbar:97          40% complete, 30m 49s elapsed, 46m 12s remaining. 124823 spikes found.
2017-05-30 11:51:07  main:222                Processing chunk <Chunk (57425500/143507520), recording 0>...
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2017-05-30 11:51:37  progressbar:97          40% complete, 31m 19s elapsed, 45m 30s remaining. 127517 spikes found.
2017-05-30 11:51:37  main:222                Processing chunk <Chunk (58509000/143507520), recording 0>...
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2017-05-30 11:52:07  progressbar:97          41% complete, 31m 50s elapsed, 44m 43s remaining. 130081 spikes found.
2017-05-30 11:52:07  main:222                Processing chunk <Chunk (59671300/143507520), recording 0>...
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2017-05-30 11:56:09  progressbar:97          47% complete, 35m 51s elapsed, 39m 26s remaining. 143591 spikes found.
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2017-05-30 11:59:42  progressbar:97          51% complete, 39m 24s elapsed, 36m 26s remaining. 154022 spikes found.
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2017-05-30 12:00:13  progressbar:97          52% complete, 39m 55s elapsed, 35m 45s remaining. 155179 spikes found.
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2017-05-30 12:00:43  progressbar:97          53% complete, 40m 25s elapsed, 35m 7s remaining. 156207 spikes found.
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2017-05-30 12:01:13  progressbar:97          54% complete, 40m 55s elapsed, 34m 31s remaining. 157461 spikes found.
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2017-05-30 12:04:16  progressbar:97          58% complete, 43m 59s elapsed, 30m 35s remaining. 167329 spikes found.
2017-05-30 12:04:16  main:222                Processing chunk <Chunk (84631200/143507520), recording 0>...
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2017-05-30 12:04:47  progressbar:97          59% complete, 44m 29s elapsed, 30m 5s remaining. 169231 spikes found.
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2017-05-30 12:05:17  progressbar:97          60% complete, 44m 59s elapsed, 29m 29s remaining. 171251 spikes found.
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2017-05-30 12:11:22  progressbar:97          68% complete, 51m 4s elapsed, 22m 59s remaining. 186972 spikes found.
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2017-05-30 12:11:53  progressbar:97          69% complete, 51m 35s elapsed, 22m 30s remaining. 188449 spikes found.
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2017-05-30 12:12:22  progressbar:97          70% complete, 52m 5s elapsed, 22m 14s remaining. 190542 spikes found.
2017-05-30 12:12:22  main:222                Processing chunk <Chunk (100568500/143507520), recording 0>...
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2017-05-30 12:12:54  progressbar:97          70% complete, 52m 36s elapsed, 22m 3s remaining. 193026 spikes found.
2017-05-30 12:12:54  main:222                Processing chunk <Chunk (101120100/143507520), recording 0>...
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2017-05-30 12:13:25  progressbar:97          70% complete, 53m 7s elapsed, 21m 48s remaining. 195719 spikes found.
2017-05-30 12:13:25  main:222                Processing chunk <Chunk (101750500/143507520), recording 0>...
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2017-05-30 12:13:55  progressbar:97          71% complete, 53m 38s elapsed, 21m 34s remaining. 198272 spikes found.
2017-05-30 12:13:55  main:222                Processing chunk <Chunk (102341500/143507520), recording 0>...
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2017-05-30 12:14:26  progressbar:97          71% complete, 54m 8s elapsed, 21m 13s remaining. 200504 spikes found.
2017-05-30 12:14:26  main:222                Processing chunk <Chunk (103090100/143507520), recording 0>...
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2017-05-30 12:14:56  progressbar:97          72% complete, 54m 39s elapsed, 21m 0s remaining. 202907 spikes found.
2017-05-30 12:14:56  main:222                Processing chunk <Chunk (103661400/143507520), recording 0>...
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2017-05-30 12:15:26  progressbar:97          72% complete, 55m 9s elapsed, 20m 46s remaining. 205167 spikes found.
2017-05-30 12:15:26  main:222                Processing chunk <Chunk (104232700/143507520), recording 0>...
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2017-05-30 12:15:57  progressbar:97          73% complete, 55m 39s elapsed, 20m 33s remaining. 207674 spikes found.
2017-05-30 12:15:57  main:222                Processing chunk <Chunk (104804000/143507520), recording 0>...
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2017-05-30 12:16:27  progressbar:97          73% complete, 56m 9s elapsed, 20m 12s remaining. 209774 spikes found.
2017-05-30 12:16:27  main:222                Processing chunk <Chunk (105532900/143507520), recording 0>...
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2017-05-30 12:16:58  progressbar:97          74% complete, 56m 40s elapsed, 19m 54s remaining. 212692 spikes found.
2017-05-30 12:16:58  main:222                Processing chunk <Chunk (106202700/143507520), recording 0>...
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2017-05-30 12:17:28  progressbar:97          74% complete, 57m 10s elapsed, 19m 41s remaining. 214978 spikes found.
2017-05-30 12:17:28  main:222                Processing chunk <Chunk (106754300/143507520), recording 0>...
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2017-05-30 12:17:58  progressbar:97          74% complete, 57m 41s elapsed, 19m 21s remaining. 217027 spikes found.
2017-05-30 12:17:58  main:222                Processing chunk <Chunk (107443800/143507520), recording 0>...
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2017-05-30 12:18:29  progressbar:97          75% complete, 58m 11s elapsed, 19m 8s remaining. 219169 spikes found.
2017-05-30 12:18:29  main:222                Processing chunk <Chunk (107995400/143507520), recording 0>...
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2017-05-30 12:18:59  progressbar:97          75% complete, 58m 42s elapsed, 18m 46s remaining. 221226 spikes found.
2017-05-30 12:18:59  main:222                Processing chunk <Chunk (108724300/143507520), recording 0>...
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2017-05-30 12:19:30  progressbar:97          76% complete, 59m 12s elapsed, 18m 22s remaining. 223641 spikes found.
2017-05-30 12:19:30  main:222                Processing chunk <Chunk (109512300/143507520), recording 0>...
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2017-05-30 12:20:00  progressbar:97          76% complete, 59m 42s elapsed, 18m 1s remaining. 225582 spikes found.
2017-05-30 12:20:00  main:222                Processing chunk <Chunk (110221500/143507520), recording 0>...
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2017-05-30 12:20:30  progressbar:97          77% complete, 1h 0m 12s elapsed, 17m 45s remaining. 228212 spikes found.
2017-05-30 12:20:30  main:222                Processing chunk <Chunk (110812500/143507520), recording 0>...
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2017-05-30 12:21:01  progressbar:97          77% complete, 1h 0m 43s elapsed, 17m 28s remaining. 230689 spikes found.
2017-05-30 12:21:01  main:222                Processing chunk <Chunk (111442900/143507520), recording 0>...
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2017-05-30 12:21:31  progressbar:97          78% complete, 1h 1m 13s elapsed, 17m 7s remaining. 232502 spikes found.
2017-05-30 12:21:31  main:222                Processing chunk <Chunk (112152100/143507520), recording 0>...
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2017-05-30 12:22:01  progressbar:97          78% complete, 1h 1m 43s elapsed, 16m 50s remaining. 235104 spikes found.
2017-05-30 12:22:01  main:222                Processing chunk <Chunk (112743100/143507520), recording 0>...
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2017-05-30 12:22:31  progressbar:97          79% complete, 1h 2m 13s elapsed, 16m 31s remaining. 237694 spikes found.
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2017-05-30 12:23:02  progressbar:97          79% complete, 1h 2m 44s elapsed, 16m 14s remaining. 239966 spikes found.
2017-05-30 12:23:02  main:222                Processing chunk <Chunk (114003900/143507520), recording 0>...
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2017-05-30 12:23:32  progressbar:97          79% complete, 1h 3m 14s elapsed, 15m 56s remaining. 242363 spikes found.
2017-05-30 12:23:32  main:222                Processing chunk <Chunk (114614600/143507520), recording 0>...
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2017-05-30 12:24:03  progressbar:97          80% complete, 1h 3m 45s elapsed, 15m 40s remaining. 244485 spikes found.
2017-05-30 12:24:03  main:222                Processing chunk <Chunk (115185900/143507520), recording 0>...
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2017-05-30 12:24:34  progressbar:97          80% complete, 1h 4m 17s elapsed, 15m 18s remaining. 246888 spikes found.
2017-05-30 12:24:34  main:222                Processing chunk <Chunk (115895100/143507520), recording 0>...
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2017-05-30 12:25:05  progressbar:97          81% complete, 1h 4m 48s elapsed, 14m 58s remaining. 249271 spikes found.
2017-05-30 12:25:05  main:222                Processing chunk <Chunk (116564900/143507520), recording 0>...
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2017-05-30 12:25:37  progressbar:97          81% complete, 1h 5m 19s elapsed, 14m 36s remaining. 251494 spikes found.
2017-05-30 12:25:37  main:222                Processing chunk <Chunk (117274100/143507520), recording 0>...
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2017-05-30 12:26:08  progressbar:97          82% complete, 1h 5m 50s elapsed, 14m 17s remaining. 253879 spikes found.
2017-05-30 12:26:08  main:222                Processing chunk <Chunk (117904500/143507520), recording 0>...
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2017-05-30 12:26:38  progressbar:97          82% complete, 1h 6m 20s elapsed, 14m 1s remaining. 256096 spikes found.
2017-05-30 12:26:38  main:222                Processing chunk <Chunk (118475800/143507520), recording 0>...
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2017-05-30 12:27:08  progressbar:97          83% complete, 1h 6m 51s elapsed, 13m 40s remaining. 258252 spikes found.
2017-05-30 12:27:08  main:222                Processing chunk <Chunk (119145600/143507520), recording 0>...
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2017-05-30 12:27:38  progressbar:97          83% complete, 1h 7m 21s elapsed, 13m 10s remaining. 260188 spikes found.
2017-05-30 12:27:38  main:222                Processing chunk <Chunk (120032100/143507520), recording 0>...
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2017-05-30 12:28:09  progressbar:97          84% complete, 1h 7m 51s elapsed, 12m 46s remaining. 262232 spikes found.
2017-05-30 12:28:09  main:222                Processing chunk <Chunk (120780700/143507520), recording 0>...
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2017-05-30 12:28:39  progressbar:97          84% complete, 1h 8m 22s elapsed, 12m 26s remaining. 264552 spikes found.
2017-05-30 12:28:39  main:222                Processing chunk <Chunk (121411100/143507520), recording 0>...
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2017-05-30 12:29:10  progressbar:97          85% complete, 1h 8m 52s elapsed, 12m 7s remaining. 266770 spikes found.
2017-05-30 12:29:10  main:222                Processing chunk <Chunk (122021800/143507520), recording 0>...
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2017-05-30 12:29:41  progressbar:97          85% complete, 1h 9m 23s elapsed, 11m 47s remaining. 268976 spikes found.
2017-05-30 12:29:41  main:222                Processing chunk <Chunk (122671900/143507520), recording 0>...
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2017-05-30 12:30:11  progressbar:97          85% complete, 1h 9m 54s elapsed, 11m 27s remaining. 271221 spikes found.
2017-05-30 12:30:11  main:222                Processing chunk <Chunk (123302300/143507520), recording 0>...
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2017-05-30 12:30:42  progressbar:97          86% complete, 1h 10m 24s elapsed, 11m 6s remaining. 273436 spikes found.
2017-05-30 12:30:42  main:222                Processing chunk <Chunk (123952400/143507520), recording 0>...
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2017-05-30 12:31:12  progressbar:97          86% complete, 1h 10m 54s elapsed, 10m 47s remaining. 275569 spikes found.
2017-05-30 12:31:12  main:222                Processing chunk <Chunk (124543400/143507520), recording 0>...
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2017-05-30 12:31:43  progressbar:97          87% complete, 1h 11m 25s elapsed, 10m 27s remaining. 277658 spikes found.
2017-05-30 12:31:43  main:222                Processing chunk <Chunk (125173800/143507520), recording 0>...
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2017-05-30 12:32:13  progressbar:97          87% complete, 1h 11m 55s elapsed, 10m 5s remaining. 279706 spikes found.
2017-05-30 12:32:13  main:222                Processing chunk <Chunk (125843600/143507520), recording 0>...
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2017-05-30 12:32:44  progressbar:97          88% complete, 1h 12m 26s elapsed, 9m 43s remaining. 281954 spikes found.
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2017-05-30 12:33:14  progressbar:97          88% complete, 1h 12m 57s elapsed, 9m 21s remaining. 284451 spikes found.
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2017-05-30 12:33:45  progressbar:97          89% complete, 1h 13m 27s elapsed, 8m 59s remaining. 286661 spikes found.
2017-05-30 12:33:45  main:222                Processing chunk <Chunk (127853000/143507520), recording 0>...
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2017-05-30 12:34:15  progressbar:97          89% complete, 1h 13m 57s elapsed, 8m 39s remaining. 289006 spikes found.
2017-05-30 12:34:15  main:222                Processing chunk <Chunk (128463700/143507520), recording 0>...
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2017-05-30 12:34:45  progressbar:97          89% complete, 1h 14m 28s elapsed, 8m 20s remaining. 291229 spikes found.
2017-05-30 12:34:45  main:222                Processing chunk <Chunk (129054700/143507520), recording 0>...
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2017-05-30 12:35:16  progressbar:97          90% complete, 1h 14m 58s elapsed, 7m 59s remaining. 293536 spikes found.
2017-05-30 12:35:16  main:222                Processing chunk <Chunk (129685100/143507520), recording 0>...
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2017-05-30 12:35:46  progressbar:97          90% complete, 1h 15m 29s elapsed, 7m 36s remaining. 295883 spikes found.
2017-05-30 12:35:46  main:222                Processing chunk <Chunk (130374600/143507520), recording 0>...
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2017-05-30 12:36:17  progressbar:97          91% complete, 1h 15m 59s elapsed, 7m 15s remaining. 297831 spikes found.
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2017-05-30 12:36:47  progressbar:97          91% complete, 1h 16m 29s elapsed, 6m 53s remaining. 300245 spikes found.
2017-05-30 12:36:47  main:222                Processing chunk <Chunk (131655100/143507520), recording 0>...
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2017-05-30 12:37:17  progressbar:97          92% complete, 1h 16m 59s elapsed, 6m 32s remaining. 302329 spikes found.
2017-05-30 12:37:17  main:222                Processing chunk <Chunk (132265800/143507520), recording 0>...
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2017-05-30 12:37:47  progressbar:97          92% complete, 1h 17m 29s elapsed, 6m 12s remaining. 304532 spikes found.
2017-05-30 12:37:47  main:222                Processing chunk <Chunk (132876500/143507520), recording 0>...
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2017-05-30 12:38:17  progressbar:97          93% complete, 1h 18m 0s elapsed, 5m 39s remaining. 305926 spikes found.
2017-05-30 12:38:17  main:222                Processing chunk <Chunk (133802400/143507520), recording 0>...
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2017-05-30 12:38:48  progressbar:97          93% complete, 1h 18m 30s elapsed, 5m 5s remaining. 306871 spikes found.
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2017-05-30 12:43:15  progressbar:97          100% complete, 1h 22m 57s elapsed, 0s remaining. 316311 spikes found.