2017-05-31 02:11:24  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170525_900um_936um_170525_150124/20170525_900um_936um_170525_150124.dat>
2017-05-31 02:11:24  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170525_900um_936um_170525_150124/6/20170525_900um_936um_170525_150124_sh6',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 6,
 'pca_nwaveforms_max': 20000,
 'prb_file': '6.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170525_900um_936um_170525_150124/20170525_900um_936um_170525_150124.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 4.5,
 'threshold_weak_std_factor': 2.0,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-05-31 02:12:06  main:200                Threshold: DoubleThreshold(strong=array([ 292.88499156,  304.09357775,  317.7097731 ,  155.22094229,
        299.4712243 ,  307.79612975,  304.84975125,  301.38405124,
        301.29887758,  301.55111999,  301.75742301,  315.72179077,
        305.45817574,  319.70013836,  305.41988653,  309.29167855,
        294.08658203,  290.19427331,  287.93442134,  285.63455499,
        283.02062439,  284.1549173 ,  271.97360669,  275.64318029,
        286.40914964,  296.58385799,  298.16258903,  291.74306795,
        289.90923597,  300.09333258,  302.53002471,  294.83005219,
        285.19300762,  278.60678893,  277.1425438 ,  284.68655434,
        282.94198111,  283.80357444,  280.48166331,  294.8297283 ,
        245.5462831 ,  241.5016578 ,  254.18981571,  262.59251287,
        271.93825572,  253.50013489,  247.65703134,  251.75049264,
        260.61787994,  275.21515561,  256.49722134,  271.98496771,
        255.13702364,  256.39971861,  257.60820952,  227.18305482,
        273.72986832,  252.19790505,  274.03258383,  266.10346395,
        269.27751498,  269.33897   ,  262.12949524,  279.53989188,
        278.5421821 ,  268.08923135,  269.17538449,  262.75139224,
        256.10735057,  250.72900687,  255.06479014,  259.29930123,
        264.09292249,  266.73669355,  259.02715461,  255.84344101,
        260.89905641,  265.2175779 ,  253.61287405,  256.07513776,
        232.38524409,  224.84335262,  243.35479317,  234.78621148,
        220.35517147,  253.69475919,  209.01622835,  213.40073146,
        271.74318434,  277.46110537,  260.53523254,  266.81458008,
        263.62422302,  256.5495267 ,  263.26562518,  264.63460535]), weak=array([ 130.17110736,  135.15270122,  141.2043436 ,   68.98708546,
        133.09832191,  136.79827989,  135.48877833,  133.94846722,
        133.91061226,  134.02272   ,  134.11441023,  140.3207959 ,
        135.75918922,  142.08895038,  135.74217179,  137.46296824,
        130.70514757,  128.97523258,  127.97085393,  126.94869111,
        125.78694417,  126.29107436,  120.87715853,  122.50808013,
        127.29295539,  131.815048  ,  132.51670623,  129.66358575,
        128.84854932,  133.37481448,  134.45778876,  131.03557875,
        126.75244783,  123.82523952,  123.17446391,  126.52735748,
        125.75199161,  126.13492197,  124.65851703,  131.0354348 ,
        109.13168138,  107.33407013,  112.97325143,  116.7077835 ,
        120.86144698,  112.66672662,  110.06979171,  111.88910784,
        115.83016886,  122.31784694,  113.99876504,  120.88220787,
        113.39423273,  113.95543049,  114.49253756,  100.97024659,
        121.65771925,  112.0879578 ,  121.79225948,  118.2682062 ,
        119.67889554,  119.70620889,  116.50199789,  124.23995195,
        123.79652538,  119.15076949,  119.63350422,  116.77839655,
        113.82548914,  111.43511416,  113.36212895,  115.24413388,
        117.37463222,  118.54964158,  115.12317983,  113.70819601,
        115.95513618,  117.87447907,  112.71683291,  113.81117234,
        103.28233071,   99.93037894,  108.15768585,  104.34942733,
         97.93563176,  112.75322631,   92.89610149,   94.84476954,
        120.7747486 ,  123.31604683,  115.79343668,  118.58425781,
        117.16632134,  114.02201186,  117.00694452,  117.61538015]))
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2017-05-31 02:12:37  progressbar:97          1% complete, 30s elapsed, 40m 40s remaining. 1771 spikes found.
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2017-05-31 02:31:46  progressbar:97          41% complete, 19m 40s elapsed, 28m 2s remaining. 46176 spikes found.
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2017-05-31 02:32:16  progressbar:97          42% complete, 20m 10s elapsed, 27m 50s remaining. 46770 spikes found.
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2017-05-31 02:35:18  progressbar:97          46% complete, 23m 12s elapsed, 26m 11s remaining. 49958 spikes found.
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2017-05-31 02:35:48  progressbar:97          47% complete, 23m 42s elapsed, 25m 53s remaining. 50671 spikes found.
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2017-05-31 02:36:19  progressbar:97          48% complete, 24m 12s elapsed, 25m 37s remaining. 51412 spikes found.
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2017-05-31 02:37:19  progressbar:97          50% complete, 25m 13s elapsed, 25m 8s remaining. 52556 spikes found.
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2017-05-31 02:37:50  progressbar:97          50% complete, 25m 43s elapsed, 24m 52s remaining. 53189 spikes found.
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2017-05-31 02:48:58  progressbar:97          69% complete, 36m 52s elapsed, 16m 5s remaining. 70658 spikes found.
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2017-05-31 02:49:59  progressbar:97          70% complete, 37m 53s elapsed, 15m 47s remaining. 74831 spikes found.
2017-05-31 02:49:59  main:222                Processing chunk <Chunk (101277700/143507520), recording 0>...
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2017-05-31 02:50:30  progressbar:97          70% complete, 38m 23s elapsed, 15m 40s remaining. 77063 spikes found.
2017-05-31 02:50:30  main:222                Processing chunk <Chunk (101888400/143507520), recording 0>...
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2017-05-31 02:51:00  progressbar:97          71% complete, 38m 54s elapsed, 15m 29s remaining. 79912 spikes found.
2017-05-31 02:51:00  main:222                Processing chunk <Chunk (102637000/143507520), recording 0>...
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2017-05-31 02:51:30  progressbar:97          72% complete, 39m 24s elapsed, 15m 13s remaining. 82093 spikes found.
2017-05-31 02:51:30  main:222                Processing chunk <Chunk (103523500/143507520), recording 0>...
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2017-05-31 02:52:00  progressbar:97          72% complete, 39m 54s elapsed, 15m 2s remaining. 84701 spikes found.
2017-05-31 02:52:00  main:222                Processing chunk <Chunk (104232700/143507520), recording 0>...
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2017-05-31 02:52:31  progressbar:97          73% complete, 40m 25s elapsed, 14m 50s remaining. 87465 spikes found.
2017-05-31 02:52:31  main:222                Processing chunk <Chunk (104961600/143507520), recording 0>...
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2017-05-31 02:53:02  progressbar:97          73% complete, 40m 55s elapsed, 14m 32s remaining. 89791 spikes found.
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2017-05-31 02:53:32  progressbar:97          74% complete, 41m 26s elapsed, 14m 21s remaining. 92392 spikes found.
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2017-05-31 02:54:03  progressbar:97          74% complete, 41m 56s elapsed, 14m 10s remaining. 94376 spikes found.
2017-05-31 02:54:03  main:222                Processing chunk <Chunk (107246800/143507520), recording 0>...
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2017-05-31 02:54:34  progressbar:97          75% complete, 42m 27s elapsed, 13m 57s remaining. 96377 spikes found.
2017-05-31 02:54:34  main:222                Processing chunk <Chunk (107995400/143507520), recording 0>...
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2017-05-31 02:55:04  progressbar:97          75% complete, 42m 58s elapsed, 13m 41s remaining. 98175 spikes found.
2017-05-31 02:55:04  main:222                Processing chunk <Chunk (108822800/143507520), recording 0>...
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2017-05-31 02:55:34  progressbar:97          76% complete, 43m 28s elapsed, 13m 30s remaining. 100006 spikes found.
2017-05-31 02:55:34  main:222                Processing chunk <Chunk (109472900/143507520), recording 0>...
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2017-05-31 02:56:06  progressbar:97          76% complete, 44m 0s elapsed, 13m 14s remaining. 102114 spikes found.
2017-05-31 02:56:06  main:222                Processing chunk <Chunk (110320000/143507520), recording 0>...
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2017-05-31 02:56:37  progressbar:97          77% complete, 44m 31s elapsed, 13m 2s remaining. 104871 spikes found.
2017-05-31 02:56:37  main:222                Processing chunk <Chunk (111009500/143507520), recording 0>...
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2017-05-31 02:57:08  progressbar:97          77% complete, 45m 1s elapsed, 12m 50s remaining. 107206 spikes found.
2017-05-31 02:57:08  main:222                Processing chunk <Chunk (111659600/143507520), recording 0>...
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2017-05-31 02:57:38  progressbar:97          78% complete, 45m 31s elapsed, 12m 37s remaining. 109006 spikes found.
2017-05-31 02:57:38  main:222                Processing chunk <Chunk (112349100/143507520), recording 0>...
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2017-05-31 02:58:08  progressbar:97          78% complete, 46m 2s elapsed, 12m 26s remaining. 111270 spikes found.
2017-05-31 02:58:08  main:222                Processing chunk <Chunk (112979500/143507520), recording 0>...
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2017-05-31 02:58:39  progressbar:97          79% complete, 46m 32s elapsed, 12m 14s remaining. 113667 spikes found.
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2017-05-31 02:59:09  progressbar:97          79% complete, 47m 2s elapsed, 12m 1s remaining. 116081 spikes found.
2017-05-31 02:59:09  main:222                Processing chunk <Chunk (114279700/143507520), recording 0>...
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2017-05-31 02:59:39  progressbar:97          80% complete, 47m 32s elapsed, 11m 47s remaining. 118393 spikes found.
2017-05-31 02:59:39  main:222                Processing chunk <Chunk (114988900/143507520), recording 0>...
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2017-05-31 03:00:09  progressbar:97          80% complete, 48m 3s elapsed, 11m 35s remaining. 120750 spikes found.
2017-05-31 03:00:09  main:222                Processing chunk <Chunk (115619300/143507520), recording 0>...
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2017-05-31 03:00:39  progressbar:97          81% complete, 48m 33s elapsed, 11m 21s remaining. 122893 spikes found.
2017-05-31 03:00:39  main:222                Processing chunk <Chunk (116289100/143507520), recording 0>...
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2017-05-31 03:01:11  progressbar:97          81% complete, 49m 4s elapsed, 11m 9s remaining. 125027 spikes found.
2017-05-31 03:01:11  main:222                Processing chunk <Chunk (116939200/143507520), recording 0>...
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2017-05-31 03:01:41  progressbar:97          81% complete, 49m 34s elapsed, 10m 53s remaining. 127048 spikes found.
2017-05-31 03:01:41  main:222                Processing chunk <Chunk (117648400/143507520), recording 0>...
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2017-05-31 03:02:11  progressbar:97          82% complete, 50m 5s elapsed, 10m 38s remaining. 129548 spikes found.
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2017-05-31 03:03:12  progressbar:97          83% complete, 51m 6s elapsed, 10m 3s remaining. 133705 spikes found.
2017-05-31 03:03:12  main:222                Processing chunk <Chunk (119894200/143507520), recording 0>...
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2017-05-31 03:03:43  progressbar:97          84% complete, 51m 37s elapsed, 9m 40s remaining. 136196 spikes found.
2017-05-31 03:03:43  main:222                Processing chunk <Chunk (120859500/143507520), recording 0>...
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2017-05-31 03:04:14  progressbar:97          84% complete, 52m 7s elapsed, 9m 20s remaining. 138836 spikes found.
2017-05-31 03:04:14  main:222                Processing chunk <Chunk (121686900/143507520), recording 0>...
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