2017-06-02 15:24:15  main:187                Starting SpikeDetekt version 0.3.0 on <DatRawReader /mnt/packrat/userdirs/david/zpool1/DT9/20170526_1116um_1000um_merge/20170526_1116um_1000um_merge.dat>
2017-06-02 15:24:15  main:188                Parameters: 
{'__doc__': 'Contain default parameters.',
 'canonical_pcs': None,
 'chunk_overlap': 300,
 'chunk_size': 20000,
 'connected_component_join_size': 1,
 'detect_spikes': 'negative',
 'diagnostics_path': None,
 'excerpt_size': 20000,
 'experiment_name': '/mnt/packrat/userdirs/david/zpool1/DT9/20170526_1116um_1000um_merge/3/20170526_1116um_1000um_merge_sh3',
 'extract_s_after': 16,
 'extract_s_before': 16,
 'features_contiguous': True,
 'filter_butter_order': 3,
 'filter_high': 9500.0,
 'filter_low': 600.0,
 'nbits': 16,
 'nchannels': 96,
 'nexcerpts': 60,
 'nfeatures_per_channel': 5,
 'pca_nwaveforms_max': 20000,
 'prb_file': '3.prb',
 'raw_data_files': ['/mnt/packrat/userdirs/david/zpool1/DT9/20170526_1116um_1000um_merge/20170526_1116um_1000um_merge.dat'],
 'sample_rate': 20000.0,
 'save_high': False,
 'save_low': False,
 'save_raw': False,
 'threshold_strong_std_factor': 5.0,
 'threshold_weak_std_factor': 2.5,
 'use_single_threshold': False,
 'voltage_gain': 10.0,
 'waveforms_nsamples': 32,
 'weight_power': 2}
2017-06-02 15:25:11  main:200                Threshold: DoubleThreshold(strong=array([ 325.448582  ,  341.16093665,  352.84781423,  164.90147864,
        345.29955222,  356.66207289,  344.23806177,  307.25271367,
        315.22609394,  313.15327405,  315.21201495,  320.91846255,
        307.9373281 ,  323.45920378,  320.07657229,  328.46366155,
        306.66756706,  316.2419859 ,  305.16315845,  298.96404692,
        298.41776859,  290.34683739,  293.2910104 ,  291.54681283,
        294.03936533,  308.28222048,  323.18442969,  319.3444364 ,
        294.94590056,  317.4137814 ,  312.16042683,  297.71990269,
        303.5207969 ,  300.79600017,  309.85916899,  310.73845058,
        305.90543855,  318.00139491,  305.92401765,  309.01284133,
        284.45974518,  280.06079467,  288.87792345,  287.89720463,
        292.27746971,  278.55533456,  277.16885121,  283.28964497,
        266.10489927,  288.58623365,  284.95446124,  288.9064884 ,
        269.878316  ,  288.41305463,  296.80208675,  297.63869776,
        294.63730966,  283.62259071,  280.3844605 ,  267.69405752,
        291.5706288 ,  281.0392748 ,  309.98329934,  301.10799353,
        294.60133624,  293.78968163,  288.2260291 ,  288.14887188,
        281.06557443,  277.8192656 ,  277.00223007,  278.86432654,
        282.93348798,  285.21886226,  285.88985778,  271.79609313,
        282.68961227,  287.73862397,  275.12143657,  273.3557547 ,
        255.38132955,  277.67306505,  292.89642243,  259.4559762 ,
        256.77761564,  289.42984557,  243.67264477,  240.46888436,
        292.1890053 ,  297.88118656,  298.11479144,  290.5806692 ,
        285.58765274,  294.9435451 ,  286.31516194,  290.04777235]), weak=array([ 162.724291  ,  170.58046832,  176.42390711,   82.45073932,
        172.64977611,  178.33103644,  172.11903088,  153.62635683,
        157.61304697,  156.57663702,  157.60600748,  160.45923127,
        153.96866405,  161.72960189,  160.03828614,  164.23183077,
        153.33378353,  158.12099295,  152.58157923,  149.48202346,
        149.2088843 ,  145.1734187 ,  146.6455052 ,  145.77340641,
        147.01968266,  154.14111024,  161.59221485,  159.6722182 ,
        147.47295028,  158.7068907 ,  156.08021341,  148.85995134,
        151.76039845,  150.39800009,  154.9295845 ,  155.36922529,
        152.95271928,  159.00069746,  152.96200883,  154.50642066,
        142.22987259,  140.03039734,  144.43896173,  143.94860232,
        146.13873485,  139.27766728,  138.58442561,  141.64482248,
        133.05244963,  144.29311683,  142.47723062,  144.4532442 ,
        134.939158  ,  144.20652731,  148.40104337,  148.81934888,
        147.31865483,  141.81129535,  140.19223025,  133.84702876,
        145.7853144 ,  140.5196374 ,  154.99164967,  150.55399676,
        147.30066812,  146.89484082,  144.11301455,  144.07443594,
        140.53278721,  138.9096328 ,  138.50111503,  139.43216327,
        141.46674399,  142.60943113,  142.94492889,  135.89804656,
        141.34480613,  143.86931199,  137.56071829,  136.67787735,
        127.69066477,  138.83653252,  146.44821122,  129.7279881 ,
        128.38880782,  144.71492278,  121.83632238,  120.23444218,
        146.09450265,  148.94059328,  149.05739572,  145.2903346 ,
        142.79382637,  147.47177255,  143.15758097,  145.02388618]))
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2017-06-02 15:25:12  progressbar:97          0% complete, 0s elapsed. 30 spikes found.
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2017-06-02 15:25:42  progressbar:97          0% complete, 30s elapsed, 1h 51m 15s remaining. 3431 spikes found.
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2017-06-02 16:31:40  main:222                Processing chunk <Chunk (216325700/481749840), recording 0>...
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2017-06-02 16:32:11  progressbar:97          45% complete, 1h 6m 59s elapsed, 1h 21m 24s remaining. 256099 spikes found.
2017-06-02 16:32:11  main:222                Processing chunk <Chunk (217468300/481749840), recording 0>...
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2017-06-02 16:32:42  progressbar:97          45% complete, 1h 7m 30s elapsed, 1h 21m 34s remaining. 260560 spikes found.
2017-06-02 16:32:42  main:222                Processing chunk <Chunk (218157800/481749840), recording 0>...
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2017-06-02 16:33:13  progressbar:97          45% complete, 1h 8m 1s elapsed, 1h 21m 45s remaining. 265165 spikes found.
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2017-06-02 16:33:43  progressbar:97          45% complete, 1h 8m 31s elapsed, 1h 21m 56s remaining. 269543 spikes found.
2017-06-02 16:33:43  main:222                Processing chunk <Chunk (219398900/481749840), recording 0>...
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2017-06-02 16:34:14  progressbar:97          45% complete, 1h 9m 2s elapsed, 1h 22m 8s remaining. 273850 spikes found.
2017-06-02 16:34:14  main:222                Processing chunk <Chunk (219989900/481749840), recording 0>...
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2017-06-02 16:34:44  progressbar:97          45% complete, 1h 9m 32s elapsed, 1h 22m 19s remaining. 278237 spikes found.
2017-06-02 16:34:44  main:222                Processing chunk <Chunk (220600600/481749840), recording 0>...
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2017-06-02 16:35:15  progressbar:97          45% complete, 1h 10m 3s elapsed, 1h 22m 23s remaining. 281850 spikes found.
2017-06-02 16:35:15  main:222                Processing chunk <Chunk (221388600/481749840), recording 0>...
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2017-06-02 16:35:46  progressbar:97          46% complete, 1h 10m 35s elapsed, 1h 22m 27s remaining. 285914 spikes found.
2017-06-02 16:35:46  main:222                Processing chunk <Chunk (222176600/481749840), recording 0>...
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2017-06-02 16:36:17  progressbar:97          46% complete, 1h 11m 5s elapsed, 1h 22m 37s remaining. 290182 spikes found.
2017-06-02 16:36:17  main:222                Processing chunk <Chunk (222787300/481749840), recording 0>...
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2017-06-02 16:36:47  progressbar:97          46% complete, 1h 11m 35s elapsed, 1h 22m 45s remaining. 293963 spikes found.
2017-06-02 16:36:47  main:222                Processing chunk <Chunk (223457100/481749840), recording 0>...
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2017-06-02 16:37:18  progressbar:97          46% complete, 1h 12m 6s elapsed, 1h 22m 54s remaining. 298316 spikes found.
2017-06-02 16:37:18  main:222                Processing chunk <Chunk (224087500/481749840), recording 0>...
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2017-06-02 16:37:48  progressbar:97          46% complete, 1h 12m 37s elapsed, 1h 23m 2s remaining. 302337 spikes found.
2017-06-02 16:37:48  main:222                Processing chunk <Chunk (224737600/481749840), recording 0>...
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2017-06-02 16:38:20  progressbar:97          46% complete, 1h 13m 8s elapsed, 1h 23m 11s remaining. 306419 spikes found.
2017-06-02 16:38:20  main:222                Processing chunk <Chunk (225387700/481749840), recording 0>...
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2017-06-02 16:38:51  progressbar:97          46% complete, 1h 13m 39s elapsed, 1h 23m 19s remaining. 310591 spikes found.
2017-06-02 16:38:51  main:222                Processing chunk <Chunk (226037800/481749840), recording 0>...
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2017-06-02 16:39:21  progressbar:97          47% complete, 1h 14m 9s elapsed, 1h 23m 26s remaining. 314736 spikes found.
2017-06-02 16:39:21  main:222                Processing chunk <Chunk (226687900/481749840), recording 0>...
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2017-06-02 16:39:51  progressbar:97          47% complete, 1h 14m 39s elapsed, 1h 23m 31s remaining. 318528 spikes found.
2017-06-02 16:39:51  main:222                Processing chunk <Chunk (227377400/481749840), recording 0>...
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2017-06-02 16:40:22  progressbar:97          47% complete, 1h 15m 10s elapsed, 1h 23m 37s remaining. 322504 spikes found.
2017-06-02 16:40:22  main:222                Processing chunk <Chunk (228047200/481749840), recording 0>...
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2017-06-02 16:40:52  progressbar:97          47% complete, 1h 15m 41s elapsed, 1h 23m 43s remaining. 326558 spikes found.
2017-06-02 16:40:52  main:222                Processing chunk <Chunk (228736700/481749840), recording 0>...
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2017-06-02 16:41:23  progressbar:97          47% complete, 1h 16m 11s elapsed, 1h 23m 44s remaining. 330074 spikes found.
2017-06-02 16:41:23  main:222                Processing chunk <Chunk (229505000/481749840), recording 0>...
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2017-06-02 16:41:54  progressbar:97          47% complete, 1h 16m 42s elapsed, 1h 23m 49s remaining. 334123 spikes found.
2017-06-02 16:41:54  main:222                Processing chunk <Chunk (230194500/481749840), recording 0>...
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2017-06-02 16:42:24  progressbar:97          47% complete, 1h 17m 12s elapsed, 1h 23m 56s remaining. 338072 spikes found.
2017-06-02 16:42:24  main:222                Processing chunk <Chunk (230824900/481749840), recording 0>...
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2017-06-02 16:42:55  progressbar:97          48% complete, 1h 17m 43s elapsed, 1h 24m 0s remaining. 342220 spikes found.
2017-06-02 16:42:55  main:222                Processing chunk <Chunk (231514400/481749840), recording 0>...
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2017-06-02 16:43:26  progressbar:97          48% complete, 1h 18m 14s elapsed, 1h 24m 6s remaining. 346526 spikes found.
2017-06-02 16:43:26  main:222                Processing chunk <Chunk (232184200/481749840), recording 0>...
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2017-06-02 16:43:56  progressbar:97          48% complete, 1h 18m 45s elapsed, 1h 24m 11s remaining. 350515 spikes found.
2017-06-02 16:43:56  main:222                Processing chunk <Chunk (232834300/481749840), recording 0>...
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2017-06-02 16:44:27  progressbar:97          48% complete, 1h 19m 15s elapsed, 1h 24m 14s remaining. 354408 spikes found.
2017-06-02 16:44:27  main:222                Processing chunk <Chunk (233523800/481749840), recording 0>...
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2017-06-02 16:44:58  progressbar:97          48% complete, 1h 19m 46s elapsed, 1h 24m 17s remaining. 358299 spikes found.
2017-06-02 16:44:58  main:222                Processing chunk <Chunk (234233000/481749840), recording 0>...
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2017-06-02 16:45:28  progressbar:97          48% complete, 1h 20m 17s elapsed, 1h 24m 21s remaining. 362433 spikes found.
2017-06-02 16:45:28  main:222                Processing chunk <Chunk (234922500/481749840), recording 0>...
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2017-06-02 16:45:58  progressbar:97          48% complete, 1h 20m 47s elapsed, 1h 24m 25s remaining. 366346 spikes found.
2017-06-02 16:45:58  main:222                Processing chunk <Chunk (235572600/481749840), recording 0>...
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2017-06-02 16:46:29  progressbar:97          49% complete, 1h 21m 17s elapsed, 1h 24m 25s remaining. 370062 spikes found.
2017-06-02 16:46:29  main:222                Processing chunk <Chunk (236321200/481749840), recording 0>...
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2017-06-02 16:47:00  progressbar:97          49% complete, 1h 21m 48s elapsed, 1h 24m 23s remaining. 374915 spikes found.
2017-06-02 16:47:00  main:222                Processing chunk <Chunk (237128900/481749840), recording 0>...
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2017-06-02 16:48:31  progressbar:97          49% complete, 1h 23m 19s elapsed, 1h 23m 57s remaining. 388707 spikes found.
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2017-06-02 16:49:01  progressbar:97          49% complete, 1h 23m 49s elapsed, 1h 23m 52s remaining. 393547 spikes found.
2017-06-02 16:49:01  main:222                Processing chunk <Chunk (240812800/481749840), recording 0>...
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2017-06-02 16:50:02  progressbar:97          50% complete, 1h 24m 50s elapsed, 1h 23m 39s remaining. 403128 spikes found.
2017-06-02 16:50:02  main:222                Processing chunk <Chunk (242566100/481749840), recording 0>...
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2017-06-02 16:50:32  progressbar:97          50% complete, 1h 25m 20s elapsed, 1h 23m 27s remaining. 407584 spikes found.
2017-06-02 16:50:32  main:222                Processing chunk <Chunk (243570800/481749840), recording 0>...
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2017-06-02 16:51:03  progressbar:97          50% complete, 1h 25m 51s elapsed, 1h 23m 19s remaining. 412750 spikes found.
2017-06-02 16:51:03  main:222                Processing chunk <Chunk (244477000/481749840), recording 0>...
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2017-06-02 16:51:33  progressbar:97          50% complete, 1h 26m 21s elapsed, 1h 23m 12s remaining. 417903 spikes found.
2017-06-02 16:51:33  main:222                Processing chunk <Chunk (245363500/481749840), recording 0>...
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2017-06-02 16:52:04  progressbar:97          51% complete, 1h 26m 52s elapsed, 1h 23m 6s remaining. 422708 spikes found.
2017-06-02 16:52:04  main:222                Processing chunk <Chunk (246210600/481749840), recording 0>...
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2017-06-02 16:52:35  progressbar:97          51% complete, 1h 27m 22s elapsed, 1h 23m 3s remaining. 427611 spikes found.
2017-06-02 16:52:35  main:222                Processing chunk <Chunk (246978900/481749840), recording 0>...
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2017-06-02 16:53:04  progressbar:97          51% complete, 1h 27m 53s elapsed, 1h 23m 0s remaining. 432229 spikes found.
2017-06-02 16:53:04  main:222                Processing chunk <Chunk (247747200/481749840), recording 0>...
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2017-06-02 16:53:35  progressbar:97          51% complete, 1h 28m 23s elapsed, 1h 22m 54s remaining. 436835 spikes found.
2017-06-02 16:53:35  main:222                Processing chunk <Chunk (248574600/481749840), recording 0>...
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2017-06-02 16:54:05  progressbar:97          51% complete, 1h 28m 53s elapsed, 1h 22m 51s remaining. 441235 spikes found.
2017-06-02 16:54:05  main:222                Processing chunk <Chunk (249342900/481749840), recording 0>...
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2017-06-02 16:54:36  progressbar:97          51% complete, 1h 29m 24s elapsed, 1h 22m 45s remaining. 445986 spikes found.
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2017-06-02 18:10:15  progressbar:97          99% complete, 2h 45m 3s elapsed, 55s remaining. 703316 spikes found.
2017-06-02 18:10:15  main:222                Processing chunk <Chunk (479044900/481749840), recording 0>...
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2017-06-02 18:10:45  progressbar:97          99% complete, 2h 45m 33s elapsed, 28s remaining. 704743 spikes found.
2017-06-02 18:10:45  main:222                Processing chunk <Chunk (480364800/481749840), recording 0>...
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2017-06-02 18:11:15  progressbar:97          99% complete, 2h 46m 3s elapsed, 2s remaining. 706053 spikes found.
2017-06-02 18:11:15  main:222                Processing chunk <Chunk (481625600/481749840), recording 0>...
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2017-06-02 18:11:18  progressbar:97          100% complete, 2h 46m 6s elapsed, 0s remaining. 706134 spikes found.