2018-10-29 10:29:26 [D] model:380            Loading spike clusters.
2018-10-29 10:29:26 [D] model:395            Loading templates.
2018-10-29 10:29:26 [D] model:416            Loading the whitening matrix.
2018-10-29 10:29:26 [D] model:420            Loading the inverse of the whitening matrix.
2018-10-29 10:29:26 [D] model:101            Loading traces at `E:\clustering\kilosort\ham31_28-30_amp\ham31_28-30_amp.dat`.
2018-10-29 10:29:26 [D] context:46           Create cache directory `E:\clustering\kilosort\ham31_28-30_amp\.phy`.
2018-10-29 10:29:26 [D] context:67           Initialize joblib cache dir at `E:\clustering\kilosort\ham31_28-30_amp\.phy`.
2018-10-29 10:29:26 [D] context:148          The file `E:\clustering\kilosort\ham31_28-30_amp\.phy\new_cluster_id.pkl` doesn't exist.
2018-10-29 10:29:26 [D] context:148          The file `E:\clustering\kilosort\ham31_28-30_amp\.phy\spikes_per_cluster.pkl` doesn't exist.
2018-10-29 10:29:26 [D] clustering:253       Recompute spikes_per_cluster manually: this is long.
2018-10-29 10:29:26 [D] context:134          Save data to `E:\clustering\kilosort\ham31_28-30_amp\.phy\spikes_per_cluster.pkl`.
2018-10-29 10:29:26 [D] config:46            Load config file `C:\Users\Viktor Varga\.phy\phy_config.py`.
2018-10-29 10:29:26 [D] __init__:40          Attached plugin ControllerSettings.
2018-10-29 10:29:26 [D] __init__:40          Attached plugin Recluster.
2018-10-29 10:29:26 [D] __init__:40          Attached plugin Export2neurosuite.
2018-10-29 10:29:26 [D] gui:432              Load the GUI state from `C:\Users\Viktor Varga\.phy\TemplateGUI\state.json`.
2018-10-29 10:29:27 [D] gui:173              Load the geometry state.
2018-10-29 10:29:32 [D] supervisor:342       Select cluster(s): 0.
2018-10-29 10:29:36 [D] model:342            Save `E:\clustering\kilosort\ham31_28-30_amp\spike_clusters.npy`.
2018-10-29 10:29:36 [D] model:334            Save `E:\clustering\kilosort\ham31_28-30_amp\cluster_group.tsv`.
2018-10-29 10:29:36 [D] context:134          Save data to `E:\clustering\kilosort\ham31_28-30_amp\.phy\spikes_per_cluster.pkl`.
2018-10-29 15:09:14 [W] recluster:207        Removing outliers by Mahalanobis distance
2018-10-29 15:09:15 [I] recluster:250        Outliers detected: 347.
2018-10-29 15:09:15 [D] supervisor:181       Register next_cluster to 384: 12
2018-10-29 15:09:15 [I] supervisor:209       Assigned 176502 spikes.
2018-10-29 15:09:16 [D] supervisor:342       Select cluster(s): 385, 384.
2018-10-29 15:09:16 [D] supervisor:525       Save the new cluster id: 386.
2018-10-29 15:09:16 [D] context:134          Save data to `E:\clustering\kilosort\ham31_28-30_amp\.phy\new_cluster_id.json`.
2018-10-29 15:09:25 [D] supervisor:342       Select cluster(s): 384.
2018-10-29 15:09:30 [I] supervisor:222       Change metadata_group for clusters 384 to good.
2018-10-29 15:09:30 [D] supervisor:482       Get next_cluster for 384: 12.
2018-10-29 15:09:30 [D] supervisor:342       Select cluster(s): 12.
2018-10-29 15:09:37 [W] recluster:207        Removing outliers by Mahalanobis distance
2018-10-29 15:09:38 [I] recluster:250        Outliers detected: 217.
2018-10-29 15:09:38 [D] supervisor:181       Register next_cluster to 386: 44
2018-10-29 15:09:38 [I] supervisor:209       Assigned 126925 spikes.
2018-10-29 15:09:38 [D] supervisor:342       Select cluster(s): 387, 386.
2018-10-29 15:09:38 [D] supervisor:525       Save the new cluster id: 388.
2018-10-29 15:09:38 [D] context:134          Save data to `E:\clustering\kilosort\ham31_28-30_amp\.phy\new_cluster_id.json`.
2018-10-29 15:09:47 [D] supervisor:342       Select cluster(s): 386.
2018-10-29 15:10:18 [D] supervisor:181       Register next_cluster to 388: 44
2018-10-29 15:10:18 [I] supervisor:209       Assigned 126708 spikes.
2018-10-29 15:10:18 [D] supervisor:342       Select cluster(s): 389, 388.
2018-10-29 15:10:18 [D] supervisor:525       Save the new cluster id: 390.
2018-10-29 15:10:18 [D] context:134          Save data to `E:\clustering\kilosort\ham31_28-30_amp\.phy\new_cluster_id.json`.
2018-10-29 15:10:28 [D] supervisor:342       Select cluster(s): 389.
2018-11-03 01:40:05 [D] model:342            Save `E:\clustering\kilosort\ham31_28-30_amp\spike_clusters.npy`.
2018-11-03 01:40:05 [D] model:334            Save `E:\clustering\kilosort\ham31_28-30_amp\cluster_group.tsv`.
2018-11-03 01:40:05 [D] context:134          Save data to `E:\clustering\kilosort\ham31_28-30_amp\.phy\spikes_per_cluster.pkl`.
2018-11-03 01:40:08 [D] gui:179              Save the geometry state.
2018-11-03 01:40:08 [D] gui:437              Save the GUI state to `C:\Users\Viktor Varga\.phy\TemplateGUI\state.json`.
2018-11-03 01:40:08 [D] gui:437              Save the GUI state to `C:\Users\Viktor Varga\.phy\TemplateGUI\state.json`.
2018-11-03 01:40:08 [D] gui:437              Save the GUI state to `C:\Users\Viktor Varga\.phy\TemplateGUI\state.json`.
2018-11-03 01:40:08 [D] gui:437              Save the GUI state to `C:\Users\Viktor Varga\.phy\TemplateGUI\state.json`.
2018-11-03 01:40:08 [D] gui:437              Save the GUI state to `C:\Users\Viktor Varga\.phy\TemplateGUI\state.json`.
2018-11-03 01:40:08 [D] gui:437              Save the GUI state to `C:\Users\Viktor Varga\.phy\TemplateGUI\state.json`.
2018-11-03 01:40:08 [D] gui:437              Save the GUI state to `C:\Users\Viktor Varga\.phy\TemplateGUI\state.json`.
2018-11-03 01:40:08 [D] gui:437              Save the GUI state to `C:\Users\Viktor Varga\.phy\TemplateGUI\state.json`.
2018-11-03 01:40:08 [D] context:102          Save memcache for `phycontrib.template.gui.get_template_for_cluster`.
2018-11-03 01:40:08 [D] context:102          Save memcache for `phycontrib.template.gui.get_probe_depth`.
2018-11-03 01:40:08 [D] context:102          Save memcache for `phycontrib.template.gui.get_best_channel`.
2018-11-03 01:40:08 [D] context:102          Save memcache for `phycontrib.template.gui.get_best_channels`.
2018-11-03 01:40:08 [D] context:102          Save memcache for `phycontrib.template.gui.get_template_counts`.