2019-04-01 12:28:57 [D] model:381            Loading spike clusters.
2019-04-01 12:28:57 [D] model:396            Loading templates.
2019-04-01 12:28:57 [D] model:417            Loading the whitening matrix.
2019-04-01 12:28:57 [D] model:421            Loading the inverse of the whitening matrix.
2019-04-01 12:28:57 [D] model:101            Loading traces at `E:\clustering\ham34_132-134_amp\ham34_132-134_amp.dat`.
2019-04-01 12:28:57 [D] model:316            Load `cluster_group.tsv`.
2019-04-01 12:28:58 [D] context:46           Create cache directory `E:\clustering\ham34_132-134_amp\Kilosort_2019-03-30_181010\.phy`.
2019-04-01 12:28:58 [D] context:67           Initialize joblib cache dir at `E:\clustering\ham34_132-134_amp\Kilosort_2019-03-30_181010\.phy`.
2019-04-01 12:28:58 [D] context:148          The file `E:\clustering\ham34_132-134_amp\Kilosort_2019-03-30_181010\.phy\new_cluster_id.pkl` doesn't exist.
2019-04-01 12:28:58 [D] context:148          The file `E:\clustering\ham34_132-134_amp\Kilosort_2019-03-30_181010\.phy\spikes_per_cluster.pkl` doesn't exist.
2019-04-01 12:28:58 [D] clustering:253       Recompute spikes_per_cluster manually: this is long.
2019-04-01 12:28:58 [D] context:134          Save data to `E:\clustering\ham34_132-134_amp\Kilosort_2019-03-30_181010\.phy\spikes_per_cluster.pkl`.
2019-04-01 12:28:58 [D] config:46            Load config file `C:\Users\yiyao\.phy\phy_config.py`.
2019-04-01 12:28:58 [D] __init__:40          Attached plugin ControllerSettings.
2019-04-01 12:28:58 [D] __init__:40          Attached plugin Recluster.
2019-04-01 12:28:58 [D] __init__:40          Attached plugin AmplitudeHistogram.
2019-04-01 12:28:58 [D] gui:432              Load the GUI state from `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 12:29:02 [D] gui:173              Load the geometry state.
2019-04-01 12:29:35 [D] supervisor:342       Select cluster(s): 3.
2019-04-01 12:29:37 [I] amplitude_histogram:104 Fitting failed with maxfev=10000, trying maxfev=1000000
2019-04-01 12:29:41 [D] amplitude_histogram:128 Cluster 3 is missing 100.0 of spikes
2019-04-01 12:29:44 [D] supervisor:342       Select cluster(s): 3.
2019-04-01 12:29:45 [I] amplitude_histogram:104 Fitting failed with maxfev=10000, trying maxfev=1000000
2019-04-01 12:29:49 [D] amplitude_histogram:128 Cluster 3 is missing 100.0 of spikes
2019-04-01 12:30:13 [D] supervisor:342       Select cluster(s): 24.
2019-04-01 12:30:13 [D] amplitude_histogram:128 Cluster 24 is missing 0.8 of spikes
2019-04-01 12:30:15 [D] feature:342          Choose channels 13 and 10 in feature view.
2019-04-01 12:30:18 [D] feature:342          Choose channels 12 and 10 in feature view.
2019-04-01 12:30:25 [D] supervisor:181       Register next_cluster to 614: 1
2019-04-01 12:30:25 [I] supervisor:209       Assigned 166464 spikes.
2019-04-01 12:30:26 [D] supervisor:342       Select cluster(s): 615, 614.
2019-04-01 12:30:26 [D] supervisor:525       Save the new cluster id: 616.
2019-04-01 12:30:26 [D] context:134          Save data to `E:\clustering\ham34_132-134_amp\Kilosort_2019-03-30_181010\.phy\new_cluster_id.json`.
2019-04-01 12:30:28 [D] amplitude_histogram:128 Cluster 615 is missing 0.1 of spikes
2019-04-01 12:30:28 [D] amplitude_histogram:128 Cluster 614 is missing 0.7 of spikes
2019-04-01 12:30:29 [D] supervisor:342       Select cluster(s): 614.
2019-04-01 12:30:30 [D] amplitude_histogram:128 Cluster 614 is missing 0.7 of spikes
2019-04-01 12:30:37 [D] supervisor:342       Select cluster(s): 614, 33.
2019-04-01 12:30:38 [D] amplitude_histogram:128 Cluster 614 is missing 0.7 of spikes
2019-04-01 12:30:38 [D] amplitude_histogram:128 Cluster 33 is missing 24.4 of spikes
2019-04-01 12:30:43 [D] supervisor:342       Select cluster(s): 614, 615.
2019-04-01 12:30:44 [D] amplitude_histogram:128 Cluster 614 is missing 0.7 of spikes
2019-04-01 12:30:44 [D] amplitude_histogram:128 Cluster 615 is missing 0.1 of spikes
2019-04-01 12:30:45 [D] supervisor:342       Select cluster(s): 614, 19.
2019-04-01 12:30:46 [D] amplitude_histogram:128 Cluster 614 is missing 0.7 of spikes
2019-04-01 12:30:46 [D] amplitude_histogram:128 Cluster 19 is missing 1.2 of spikes
2019-04-01 12:31:25 [D] gui:179              Save the geometry state.
2019-04-01 12:31:25 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 12:31:25 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 12:31:25 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 12:31:25 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 12:31:25 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 12:31:25 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 12:31:25 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 12:31:25 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 12:31:25 [D] context:102          Save memcache for `phycontrib.template.gui.get_probe_depth`.
2019-04-01 12:31:25 [D] context:102          Save memcache for `phycontrib.template.gui.get_template_counts`.
2019-04-01 12:31:25 [D] context:102          Save memcache for `phycontrib.template.gui.get_best_channels`.
2019-04-01 12:31:25 [D] context:102          Save memcache for `phycontrib.template.gui.get_template_for_cluster`.
2019-04-01 12:31:25 [D] context:102          Save memcache for `phycontrib.template.gui.get_best_channel`.
2019-04-01 13:32:51 [D] model:381            Loading spike clusters.
2019-04-01 13:32:51 [D] model:396            Loading templates.
2019-04-01 13:32:51 [D] model:417            Loading the whitening matrix.
2019-04-01 13:32:51 [D] model:421            Loading the inverse of the whitening matrix.
2019-04-01 13:32:51 [D] model:101            Loading traces at `E:\clustering\ham34_132-134_amp\ham34_132-134_amp.dat`.
2019-04-01 13:32:51 [D] model:316            Load `cluster_group.tsv`.
2019-04-01 13:32:52 [D] context:67           Initialize joblib cache dir at `E:\clustering\ham34_132-134_amp\Kilosort_2019-03-30_181010\.phy`.
2019-04-01 13:32:52 [D] context:91           Load memcache for `phycontrib.template.gui.get_template_counts`.
2019-04-01 13:32:52 [D] context:91           Load memcache for `phycontrib.template.gui.get_template_for_cluster`.
2019-04-01 13:32:52 [D] context:91           Load memcache for `phycontrib.template.gui.get_best_channel`.
2019-04-01 13:32:52 [D] context:91           Load memcache for `phycontrib.template.gui.get_best_channels`.
2019-04-01 13:32:52 [D] context:91           Load memcache for `phycontrib.template.gui.get_probe_depth`.
2019-04-01 13:32:52 [D] context:134          Save data to `E:\clustering\ham34_132-134_amp\Kilosort_2019-03-30_181010\.phy\spikes_per_cluster.pkl`.
2019-04-01 13:32:52 [D] config:46            Load config file `C:\Users\yiyao\.phy\phy_config.py`.
2019-04-01 13:32:52 [D] __init__:40          Attached plugin ControllerSettings.
2019-04-01 13:32:52 [D] __init__:40          Attached plugin Recluster.
2019-04-01 13:32:52 [D] __init__:40          Attached plugin AmplitudeHistogram.
2019-04-01 13:32:52 [D] gui:432              Load the GUI state from `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 13:32:55 [D] gui:173              Load the geometry state.
2019-04-01 13:33:12 [D] gui:179              Save the geometry state.
2019-04-01 13:33:12 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 13:33:12 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 13:33:12 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 13:33:12 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 13:33:12 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 13:33:12 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 13:33:12 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 13:33:12 [D] gui:437              Save the GUI state to `C:\Users\yiyao\.phy\TemplateGUI\state.json`.
2019-04-01 13:33:12 [D] context:102          Save memcache for `phycontrib.template.gui.get_best_channels`.
2019-04-01 13:33:12 [D] context:102          Save memcache for `phycontrib.template.gui.get_template_counts`.
2019-04-01 13:33:12 [D] context:102          Save memcache for `phycontrib.template.gui.get_best_channel`.
2019-04-01 13:33:12 [D] context:102          Save memcache for `phycontrib.template.gui.get_template_for_cluster`.
2019-04-01 13:33:12 [D] context:102          Save memcache for `phycontrib.template.gui.get_probe_depth`.